MGE detailed information
MGE type: Prophage MGE length: 41278 bp
Accession: NZ_AP022549 Location: 2168383..2209660 Organism: Escherichia coli strain THO-015 Replicon: chromosome
Accession: NZ_AP022549 Location: 2168383..2209660 Organism: Escherichia coli strain THO-015 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF69_RS10330 () | 2163791..2164357 | - | 567 | WP_000891625.1 | hydrolase | - |
| JLF69_RS10335 () | 2164667..2166439 | + | 1773 | WP_001258676.1 | aspartate--tRNA ligase | - |
| JLF69_RS10340 () | 2166432..2166884 | + | 453 | WP_077249130.1 | dihydroneopterin triphosphate diphosphatase | - |
| JLF69_RS10345 () | 2166913..2167653 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| JLF69_RS10350 () | 2167688..2168209 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| JLF69_RS10355 () | 2168383..2169080 | - | 698 | Protein_2027 | IS1 family transposase | - |
| JLF69_RS10360 () | 2169203..2169268 | + | 66 | WP_072093883.1 | stress response small protein YobI | - |
| JLF69_RS10365 () | 2169407..2170018 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| JLF69_RS10370 () | 2170027..2171037 | + | 1011 | WP_000568520.1 | Holliday junction branch migration DNA helicase RuvB | - |
| JLF69_RS10375 () | 2171147..2172495 | + | 1349 | WP_099156422.1 | IS3 family transposase | - |
| JLF69_RS10380 () | 2172689..2173474 | - | 786 | WP_000571478.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| JLF69_RS10385 () | 2173471..2174226 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| JLF69_RS10390 () | 2174305..2175237 | + | 933 | WP_001347089.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| JLF69_RS10395 () | 2175253..2176575 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| JLF69_RS10400 () | 2176694..2177665 | + | 972 | WP_001296141.1 | Lipid A biosynthesis myristoyltransferase | VF |
| JLF69_RS10405 () | 2177797..2179239 | - | 1443 | WP_000091149.1 | pyruvate kinase | - |
| JLF69_RS10410 () | 2179367..2180236 | - | 870 | WP_001056695.1 | DNA-binding transcriptional regulator HexR | - |
| JLF69_RS10415 () | 2180574..2182049 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| JLF69_RS10420 () | 2182284..2184095 | + | 1812 | WP_001069461.1 | phosphogluconate dehydratase | - |
| JLF69_RS10425 () | 2184132..2184773 | + | 642 | WP_000800503.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JLF69_RS10430 () | 2184829..2186007 | - | 1179 | WP_000173466.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JLF69_RS10435 () | 2186141..2186431 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JLF69_RS10440 () | 2186498..2186854 | + | 357 | WP_001295500.1 | protein YebF | - |
| JLF69_RS10445 () | 2187181..2187840 | + | 660 | WP_000024724.1 | tellurite resistance TerB family protein | - |
| JLF69_RS10450 () | 2188049..2190109 | + | 2061 | WP_000936925.1 | oligopeptidase B | - |
| JLF69_RS10455 () | 2190106..2190768 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JLF69_RS10460 () | 2190792..2191448 | - | 657 | WP_000011664.1 | carbon-nitrogen hydrolase family protein | - |
| JLF69_RS10465 () | 2191550..2191780 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JLF69_RS10470 () | 2191919..2192293 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| JLF69_RS10475 () | 2192297..2193169 | + | 873 | WP_000879317.1 | copper homeostasis membrane protein CopD | - |
| JLF69_RS10480 () | 2193182..2193523 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 2193553..2193821 | - | 269 | - | - | Antitoxin Detail |
| - () | 2193681..2193783 | + | 103 | - | - | Toxin Detail |
| JLF69_RS10485 () | 2193918..2194574 | + | 657 | WP_000812745.1 | protein-serine/threonine phosphatase | - |
| JLF69_RS10490 () | 2194575..2194766 | - | 192 | WP_001296140.1 | YebW family protein | - |
| JLF69_RS10495 () | 2194871..2195107 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JLF69_RS10500 () | 2195224..2196663 | - | 1440 | WP_001296139.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JLF69_RS10505 () | 2196743..2199376 | - | 2634 | WP_001298452.1 | hypothetical protein | VF |
| JLF69_RS10510 () | 2199345..2200628 | - | 1284 | WP_001531756.1 | membrane integrity lipid transport subunit YebS | - |
| JLF69_RS10515 () | 2200758..2201255 | + | 498 | WP_001029106.1 | L-methionine (R)-S-oxide reductase | - |
| JLF69_RS10520 () | 2201352..2202050 | + | 699 | WP_000431388.1 | RNA chaperone ProQ | - |
| JLF69_RS10525 () | 2202070..2204118 | + | 2049 | WP_001055794.1 | carboxy terminal-processing peptidase | - |
| JLF69_RS10530 () | 2204310..2205191 | + | 882 | WP_000984517.1 | protease HtpX | - |
| JLF69_RS10535 () | 2205237..2206610 | - | 1374 | WP_001296135.1 | MFS transporter | - |
| JLF69_RS10540 () | 2206787..2207578 | + | 792 | WP_001262185.1 | DNA-binding transcriptional regulator KdgR | - |
| JLF69_RS10545 () | 2207722..2207961 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| JLF69_RS10550 () | 2208120..2208263 | + | 144 | WP_000714544.1 | PhoP/PhoQ regulator MgrB | - |
| JLF69_RS10555 () | 2208338..2208625 | + | 288 | WP_001006866.1 | YebO family protein | - |
| JLF69_RS10560 () | 2209295..2209438 | + | 144 | WP_001295496.1 | YobF family protein | - |
| JLF69_RS10565 () | 2209451..2209660 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JLF69_RS10570 () | 2209826..2210635 | + | 810 | WP_000010096.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JLF69_RS10575 () | 2210632..2211198 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JLF69_RS10580 () | 2211627..2212085 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| JLF69_RS10585 () | 2212140..2212991 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JLF69_RS10590 () | 2213004..2213804 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|