MGE detailed information
MGE type: Prophage MGE length: 23422 bp
Accession: NZ_AP022536 Location: 2146688..2170109 Organism: Escherichia coli strain THO-008 Replicon: chromosome
Accession: NZ_AP022536 Location: 2146688..2170109 Organism: Escherichia coli strain THO-008 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF34_RS09945 () | 2142817..2143458 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JLF34_RS09950 () | 2143513..2144691 | - | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JLF34_RS09955 () | 2144825..2145115 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JLF34_RS09960 () | 2145182..2145538 | + | 357 | WP_001295500.1 | protein YebF | - |
| JLF34_RS09965 () | 2145865..2146524 | + | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| JLF34_RS09970 () | 2146688..2147857 | - | 1170 | WP_000942660.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JLF34_RS09975 () | 2147914..2148339 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JLF34_RS09980 () | 2148496..2150556 | + | 2061 | WP_000936962.1 | oligopeptidase B | - |
| JLF34_RS09985 () | 2150553..2151215 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JLF34_RS09990 () | 2151239..2151895 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein | - |
| JLF34_RS09995 () | 2151997..2152227 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JLF34_RS10000 () | 2152366..2152740 | + | 375 | WP_000168743.1 | CopC domain-containing protein YobA | - |
| JLF34_RS10005 () | 2152744..2153616 | + | 873 | WP_001587145.1 | copper homeostasis membrane protein CopD | - |
| JLF34_RS10010 () | 2153629..2153970 | + | 342 | WP_000976481.1 | YebY family protein | - |
| - () | 2153998..2154269 | - | 272 | - | - | Antitoxin Detail |
| - () | 2154128..2154231 | + | 104 | - | - | Toxin Detail |
| JLF34_RS10015 () | 2154366..2155022 | + | 657 | WP_000812712.1 | protein-serine/threonine phosphatase | - |
| JLF34_RS10020 () | 2155023..2155214 | - | 192 | WP_001296140.1 | YebW family protein | - |
| JLF34_RS10025 () | 2155319..2155555 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JLF34_RS10030 () | 2155673..2157112 | - | 1440 | WP_001309555.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JLF34_RS10035 () | 2157192..2159825 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| JLF34_RS10040 () | 2159794..2161077 | - | 1284 | WP_001314811.1 | membrane integrity lipid transport subunit YebS | - |
| JLF34_RS10045 () | 2161207..2161704 | + | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| JLF34_RS10050 () | 2161801..2162499 | + | 699 | WP_000431388.1 | RNA chaperone ProQ | - |
| JLF34_RS10055 () | 2162519..2164567 | + | 2049 | WP_001055796.1 | carboxy terminal-processing peptidase | - |
| JLF34_RS10060 () | 2164759..2165640 | + | 882 | WP_000984517.1 | protease HtpX | - |
| JLF34_RS10065 () | 2165686..2167059 | - | 1374 | WP_001587144.1 | MFS transporter | - |
| JLF34_RS10070 () | 2167236..2168027 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| JLF34_RS10075 () | 2168171..2168410 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| JLF34_RS10080 () | 2168569..2168712 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JLF34_RS10085 () | 2168787..2169074 | + | 288 | WP_001006855.1 | YebO family protein | - |
| JLF34_RS10090 () | 2169744..2169887 | + | 144 | WP_001295496.1 | YobF family protein | - |
| JLF34_RS10095 () | 2169900..2170109 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JLF34_RS10100 () | 2170275..2171084 | + | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JLF34_RS10105 () | 2171081..2171647 | - | 567 | WP_001306762.1 | manganese efflux pump MntP | - |
| JLF34_RS10110 () | 2172076..2172534 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| JLF34_RS10115 () | 2172590..2173441 | - | 852 | WP_087894244.1 | PTS mannose transporter subunit IID | - |
| JLF34_RS10120 () | 2173454..2174254 | - | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|