MGE detailed information
MGE type: IScluster/Tn MGE length: 4377 bp
Accession: NZ_AP022526 Location: 79051..83427 Organism: Escherichia coli strain THO-003 Replicon: plasmid pTHO-003-1
Accession: NZ_AP022526 Location: 79051..83427 Organism: Escherichia coli strain THO-003 Replicon: plasmid pTHO-003-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF28_RS26050 () | 74515..76416 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| JLF28_RS26055 () | 76566..77063 | + | 498 | WP_042039995.1 | single-stranded DNA-binding protein | - |
| JLF28_RS26060 () | 77131..77364 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| JLF28_RS26065 () | 77392..77589 | + | 198 | Protein_87 | hypothetical protein | - |
| JLF28_RS26070 () | 77644..78078 | + | 435 | WP_000845937.1 | conjugation system SOS inhibitor PsiB | - |
| JLF28_RS26075 () | 78075..78794 | + | 720 | WP_001276238.1 | plasmid SOS inhibition protein A | - |
| JLF28_RS26080 () | 78806..78994 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 78806..79003 | + | 198 | NuclAT_0 | - | - |
| - () | 78806..79003 | + | 198 | NuclAT_0 | - | - |
| - () | 78806..79003 | + | 198 | NuclAT_0 | - | - |
| - () | 78806..79003 | + | 198 | NuclAT_0 | - | - |
| JLF28_RS26085 () | 79051..80420 | + | 1370 | WP_085947770.1 | IS3-like element IS150 family transposase | - |
| - () | 80445..80476 | + | 32 | NuclAT_1 | - | Antitoxin Detail |
| - () | 80445..80476 | + | 32 | NuclAT_1 | - | Antitoxin Detail |
| - () | 80445..80476 | + | 32 | NuclAT_1 | - | Antitoxin Detail |
| - () | 80445..80476 | + | 32 | NuclAT_1 | - | Antitoxin Detail |
| JLF28_RS26090 () | 80520..80678 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| JLF28_RS26095 () | 81011..82624 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| JLF28_RS26100 () | 82655..83005 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| JLF28_RS26105 () | 83002..83427 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| JLF28_RS26110 () | 84139..84426 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| JLF28_RS26115 () | 84544..85365 | + | 822 | WP_001234426.1 | DUF945 domain-containing protein | - |
| JLF28_RS26120 () | 85662..86264 | - | 603 | WP_013362798.1 | transglycosylase SLT domain-containing protein | - |
| JLF28_RS26125 () | 86585..86968 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| JLF28_RS26130 () | 87155..87844 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| JLF28_RS26135 () | 87943..88338 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|