MGE detailed information
MGE type: Genomic_island MGE length: 22814 bp
Accession: NZ_AP022525 Location: 4364550..4387363 Organism: Escherichia coli strain THO-003 Replicon: chromosome
Accession: NZ_AP022525 Location: 4364550..4387363 Organism: Escherichia coli strain THO-003 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF28_RS21410 () | 4359869..4360771 | - | 903 | WP_000832222.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| JLF28_RS21415 () | 4360791..4361294 | - | 504 | WP_000872001.1 | type 1 fimbria minor subunit FimG | - |
| JLF28_RS21420 () | 4361307..4361837 | - | 531 | WP_001244835.1 | type 1 fimbria minor subunit FimF | - |
| JLF28_RS21425 () | 4361847..4364483 | - | 2637 | WP_000120918.1 | fimbrial usher FimD | - |
| JLF28_RS21430 () | 4364550..4365275 | - | 726 | WP_000066560.1 | hypothetical protein | VF |
| JLF28_RS21435 () | 4365312..4365851 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| JLF28_RS21440 () | 4365916..4366464 | - | 549 | WP_000695543.1 | hypothetical protein | VF |
| JLF28_RS21445 () | 4366943..4367539 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| JLF28_RS21450 () | 4368017..4368424 | - | 408 | Protein_4208 | type 1 fimbria switch DNA invertase FimB | - |
| JLF28_RS21455 () | 4368524..4369042 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| JLF28_RS21460 () | 4369061..4370281 | + | 1221 | WP_000343765.1 | ISL3 family transposase ISEc53 | Transposase |
| JLF28_RS21465 () | 4370312..4370509 | - | 198 | Protein_4211 | type 1 fimbria switch DNA invertase FimB | - |
| JLF28_RS21470 () | 4371963..4372679 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JLF28_RS21475 () | 4372699..4373805 | + | 1107 | WP_001295733.1 | N-acetylneuraminate epimerase | - |
| JLF28_RS21480 () | 4373869..4374849 | + | 981 | WP_000991462.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| JLF28_RS21485 () | 4375432..4376538 | - | 1107 | Protein_4215 | DNA helicase | - |
| JLF28_RS21490 () | 4376601..4377748 | + | 1148 | WP_085949154.1 | IS3 family transposase ISEc52 | Transposase |
| JLF28_RS21495 () | 4377781..4377945 | + | 165 | Protein_4217 | GNAT family N-acetyltransferase | - |
| JLF28_RS21500 () | 4378322..4378579 | + | 258 | WP_001054379.1 | YjhX family toxin | Toxin Detail |
| JLF28_RS21505 () | 4378591..4379142 | + | 552 | WP_000123957.1 | N-acetyltransferase | Antitoxin Detail |
| JLF28_RS21510 () | 4379194..4379940 | + | 747 | WP_000354249.1 | class I SAM-dependent methyltransferase | - |
| JLF28_RS21515 () | 4380068..4380328 | + | 261 | WP_000077645.1 | hypothetical protein | - |
| JLF28_RS21520 () | 4380366..4380482 | + | 117 | Protein_4222 | VOC family protein | - |
| JLF28_RS21525 () | 4380727..4381848 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| JLF28_RS21530 () | 4381845..4382123 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JLF28_RS21535 () | 4382135..4383448 | + | 1314 | WP_000460845.1 | galactitol-specific PTS transporter subunit IIC | - |
| JLF28_RS21540 () | 4383461..4384267 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| JLF28_RS21545 () | 4384398..4384829 | + | 432 | WP_000606405.1 | PTS sugar transporter subunit IIA | - |
| JLF28_RS21550 () | 4384841..4385473 | + | 633 | WP_000600624.1 | ribulose-phosphate 3 epimerase family protein | - |
| JLF28_RS21555 () | 4385490..4386272 | + | 783 | WP_000082779.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| JLF28_RS21560 () | 4386575..4387363 | + | 789 | WP_000251799.1 | IclR family transcriptional regulator | - |
| JLF28_RS21565 () | 4387368..4388273 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| JLF28_RS21570 () | 4388284..4390251 | + | 1968 | WP_000116325.1 | xylonate dehydratase YjhG | - |
| JLF28_RS21575 () | 4390358..4391707 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|