MGE detailed information
MGE type: Genomic_island MGE length: 32716 bp
Accession: NZ_AP022513 Location: 3817557..3850272 Organism: Citrobacter portucalensis strain STN0717-72 Replicon: chromosome
Accession: NZ_AP022513 Location: 3817557..3850272 Organism: Citrobacter portucalensis strain STN0717-72 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF48_RS18370 () | 3813450..3814613 | + | 1164 | WP_122973896.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| JLF48_RS18380 () | 3815253..3816494 | + | 1242 | WP_200921267.1 | integrase | - |
| JLF48_RS18385 () | 3816553..3817431 | - | 879 | WP_200921266.1 | hypothetical protein | - |
| JLF48_RS18390 () | 3817557..3817769 | + | 213 | WP_001325074.1 | AlpA family transcriptional regulator | - |
| JLF48_RS18395 () | 3817900..3819312 | + | 1413 | WP_200921265.1 | DUF3987 domain-containing protein | - |
| JLF48_RS18400 () | 3819537..3820160 | + | 624 | WP_200921264.1 | inovirus Gp2 family protein | - |
| JLF48_RS18405 () | 3820271..3821515 | - | 1245 | WP_200922827.1 | restriction endonuclease subunit S | - |
| JLF48_RS18410 () | 3821508..3823142 | - | 1635 | WP_200922828.1 | type I restriction-modification system subunit M | - |
| JLF48_RS18415 () | 3823136..3826234 | - | 3099 | WP_200922829.1 | DEAD/DEAH box helicase family protein | - |
| JLF48_RS18420 () | 3826572..3826766 | + | 195 | WP_200922830.1 | hypothetical protein | - |
| JLF48_RS18425 () | 3826954..3827157 | + | 204 | WP_200922831.1 | DUF905 family protein | - |
| JLF48_RS18430 () | 3827238..3828164 | - | 927 | WP_111464827.1 | WYL domain-containing protein | - |
| JLF48_RS18435 () | 3828507..3828674 | + | 168 | WP_200924023.1 | hypothetical protein | - |
| JLF48_RS18440 () | 3828699..3829679 | + | 981 | WP_000082736.1 | IS5 family transposase ISEc68 | Transposase |
| JLF48_RS18445 () | 3829951..3830295 | + | 345 | WP_181638458.1 | FxLYD domain-containing protein | - |
| JLF48_RS18450 () | 3830331..3831029 | + | 699 | WP_200922832.1 | hypothetical protein | - |
| JLF48_RS18455 () | 3831064..3831231 | + | 168 | WP_200922833.1 | hypothetical protein | - |
| JLF48_RS18460 () | 3831480..3832343 | + | 864 | WP_200922834.1 | GTPase family protein | - |
| JLF48_RS18465 () | 3832435..3833256 | + | 822 | WP_200922835.1 | DUF945 domain-containing protein | - |
| JLF48_RS18470 () | 3833473..3834174 | + | 702 | WP_200922836.1 | WYL domain-containing protein | - |
| JLF48_RS18475 () | 3834215..3834451 | + | 237 | WP_200922837.1 | hypothetical protein | - |
| JLF48_RS18480 () | 3834451..3834891 | + | 441 | WP_097344773.1 | hypothetical protein | - |
| JLF48_RS18485 () | 3834915..3835382 | + | 468 | WP_200922838.1 | hypothetical protein | - |
| JLF48_RS18490 () | 3835459..3835698 | + | 240 | WP_087934338.1 | DUF905 domain-containing protein | - |
| JLF48_RS18495 () | 3835798..3836247 | + | 450 | WP_200922839.1 | antirestriction protein | - |
| JLF48_RS18500 () | 3836256..3836738 | + | 483 | WP_200922840.1 | DNA repair protein RadC | - |
| JLF48_RS18505 () | 3836747..3836968 | + | 222 | WP_200922841.1 | DUF987 domain-containing protein | - |
| JLF48_RS18510 () | 3836986..3837303 | + | 318 | WP_087934336.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JLF48_RS18515 () | 3837324..3837653 | + | 330 | WP_200922842.1 | TA system toxin CbtA family protein | Toxin Detail |
| JLF48_RS18520 () | 3838025..3839257 | + | 1233 | WP_154023425.1 | hypothetical protein ; Integrase | Integrase |
| JLF48_RS18525 () | 3839342..3841363 | + | 2022 | WP_200924024.1 | hypothetical protein | - |
| JLF48_RS18530 () | 3841553..3842017 | - | 465 | WP_200922843.1 | hypothetical protein | - |
| JLF48_RS18535 () | 3842019..3842255 | - | 237 | WP_200922844.1 | hypothetical protein | - |
| JLF48_RS18540 () | 3842252..3842665 | - | 414 | WP_154023422.1 | hypothetical protein | - |
| JLF48_RS18545 () | 3842658..3842831 | - | 174 | WP_200924025.1 | hypothetical protein | - |
| JLF48_RS18550 () | 3842869..3843548 | + | 680 | Protein_3646 | IS3 family transposase | - |
| JLF48_RS18555 () | 3844221..3845729 | + | 1509 | WP_033147074.1 | group II intron reverse transcriptase/maturase | - |
| JLF48_RS18560 () | 3845810..3846286 | + | 477 | Protein_3648 | IS3 family transposase ISEhe3 | Transposase |
| JLF48_RS18565 () | 3846385..3846582 | - | 198 | WP_200922847.1 | hypothetical protein | - |
| JLF48_RS18570 () | 3846527..3846802 | - | 276 | WP_200923043.1 | hypothetical protein | - |
| JLF48_RS18575 () | 3847172..3848038 | + | 867 | WP_200924026.1 | hypothetical protein | - |
| JLF48_RS18580 () | 3848246..3849421 | + | 1176 | WP_200922849.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JLF48_RS18585 () | 3849460..3850272 | + | 813 | WP_149617802.1 | hypothetical protein | - |
| JLF48_RS18590 () | 3850707..3851063 | + | 357 | WP_003826111.1 | hypothetical protein | - |
| JLF48_RS18595 () | 3851258..3852076 | - | 819 | WP_200922851.1 | 5-deoxy-glucuronate isomerase | - |
| JLF48_RS18600 () | 3852086..3852976 | - | 891 | WP_200923044.1 | myo-inosose-2 dehydratase | - |
| JLF48_RS18605 () | 3852991..3854895 | - | 1905 | WP_200922852.1 | 5-dehydro-2-deoxygluconokinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|