MGE detailed information
MGE type: Prophage MGE length: 36655 bp
Accession: NZ_AP022494 Location: 666966..703620 Organism: Citrobacter portucalensis strain STN0717-36 Replicon: chromosome
Accession: NZ_AP022494 Location: 666966..703620 Organism: Citrobacter portucalensis strain STN0717-36 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF47_RS03225 () | 663178..663762 | + | 585 | WP_003828500.1 | propanediol/glycerol family dehydratase medium subunit | - |
| JLF47_RS03230 () | 663765..664193 | + | 429 | WP_003828498.1 | diol dehydratase small subunit | - |
| JLF47_RS03235 () | 664204..666018 | + | 1815 | WP_003828496.1 | diol dehydratase reactivase subunit alpha | - |
| JLF47_RS03240 () | 666128..666451 | + | 324 | WP_001573898.1 | DUF1889 family protein | - |
| JLF47_RS03245 () | 666966..668282 | + | 1317 | WP_130997209.1 | hypothetical protein ; Integrase | Integrase |
| JLF47_RS03250 () | 668568..668714 | - | 147 | WP_094935882.1 | hypothetical protein | - |
| JLF47_RS03255 () | 668895..669905 | + | 1011 | WP_089561931.1 | hypothetical protein | - |
| JLF47_RS03260 () | 670025..670261 | + | 237 | WP_016243847.1 | AlpA family phage regulatory protein | - |
| JLF47_RS03265 () | 670396..671817 | + | 1422 | WP_097724947.1 | DUF3987 domain-containing protein | - |
| JLF47_RS03270 () | 671943..672569 | + | 627 | WP_089561933.1 | inovirus Gp2 family protein | - |
| JLF47_RS03275 () | 672834..673163 | - | 330 | WP_200923049.1 | HNH endonuclease family protein | - |
| JLF47_RS03280 () | 673275..673763 | - | 489 | Protein_643 | IS3 family transposase ISLad1 | Transposase |
| JLF47_RS03285 () | 673844..675352 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| JLF47_RS03290 () | 676025..676713 | - | 689 | Protein_645 | IS3 family transposase | - |
| JLF47_RS03295 () | 676821..677423 | - | 603 | WP_200922896.1 | helix-turn-helix domain-containing protein | - |
| JLF47_RS03300 () | 677467..678162 | + | 696 | WP_200922895.1 | B3/4 domain-containing protein | - |
| JLF47_RS03305 () | 678183..679076 | + | 894 | WP_200922894.1 | dihydrodipicolinate synthase family protein | - |
| JLF47_RS03310 () | 679526..680092 | + | 567 | WP_200922893.1 | hypothetical protein | - |
| JLF47_RS03315 () | 680492..680776 | - | 285 | WP_200922892.1 | hypothetical protein | - |
| JLF47_RS03320 () | 680804..681289 | - | 486 | WP_200922891.1 | hypothetical protein | - |
| JLF47_RS03325 () | 681367..682064 | + | 698 | Protein_652 | IS1 family transposase IS1R | Transposase |
| JLF47_RS03330 () | 682081..682713 | + | 633 | Protein_653 | IS6 family transposase IS26 | Transposase |
| JLF47_RS03335 () | 682747..683760 | - | 1014 | Protein_654 | hypothetical protein | VF |
| JLF47_RS03340 () | 683866..684813 | + | 948 | WP_023356254.1 | IS30 family transposase ISSde3 | Transposase |
| JLF47_RS03345 () | 684776..686418 | - | 1643 | Protein_656 | diguanylate cyclase | - |
| JLF47_RS03350 () | 686703..687407 | - | 705 | WP_082261900.1 | IS6 family transposase IS26 | Transposase |
| JLF47_RS03355 () | 688214..688911 | + | 698 | Protein_658 | IS1 family transposase IS1R | Transposase |
| JLF47_RS03360 () | 688966..689277 | + | 312 | WP_200922890.1 | hypothetical protein | - |
| JLF47_RS03365 () | 689374..689802 | - | 429 | WP_200922889.1 | organic hydroperoxide resistance protein | - |
| JLF47_RS03370 () | 690062..690841 | - | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| JLF47_RS03375 () | 690841..691863 | - | 1023 | WP_199980491.1 | IS21 family transposase IS100kyp | Transposase |
| JLF47_RS03380 () | 692111..693013 | - | 903 | WP_200922888.1 | LysR family transcriptional regulator | - |
| JLF47_RS03385 () | 693112..693420 | + | 309 | WP_185666326.1 | monooxygenase | - |
| JLF47_RS03390 () | 693557..694429 | - | 873 | WP_200922887.1 | Acetyl esterase | VF |
| JLF47_RS03395 () | 694806..695045 | + | 240 | WP_200922886.1 | YceI family protein | - |
| JLF47_RS03405 () | 696668..696859 | + | 192 | Protein_668 | DUF905 family protein | - |
| JLF47_RS03410 () | 696873..697334 | + | 462 | WP_200922885.1 | antirestriction protein | - |
| JLF47_RS03415 () | 697343..697825 | + | 483 | WP_200922884.1 | DNA repair protein RadC | - |
| JLF47_RS03420 () | 697834..698055 | + | 222 | WP_200922883.1 | DUF987 domain-containing protein | - |
| JLF47_RS03425 () | 698074..698391 | + | 318 | WP_200922882.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JLF47_RS03430 () | 698412..698753 | + | 342 | WP_039025449.1 | TA system toxin CbtA family protein | Toxin Detail |
| JLF47_RS03440 () | 699116..699622 | + | 507 | WP_149281949.1 | G/U mismatch-specific DNA glycosylase | - |
| JLF47_RS03445 () | 699668..701515 | - | 1848 | WP_003024699.1 | RNA polymerase sigma factor RpoD | - |
| JLF47_RS03450 () | 701875..703620 | - | 1746 | WP_200921149.1 | DNA primase | - |
| JLF47_RS03455 () | 703858..704073 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| JLF47_RS03460 () | 704310..705323 | + | 1014 | WP_200921151.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| JLF47_RS03465 () | 705411..706028 | - | 618 | WP_003828463.1 | urease accessory protein UreG | - |
| JLF47_RS03470 () | 706038..706709 | - | 672 | WP_003828461.1 | urease accessory protein UreF | - |
| JLF47_RS03475 () | 706709..707167 | - | 459 | WP_200921153.1 | urease accessory protein UreE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|