MGE detailed information
MGE type: Prophage MGE length: 75064 bp
Accession: NZ_AP022494 Location: 2105547..2180610 Organism: Citrobacter portucalensis strain STN0717-36 Replicon: chromosome
Accession: NZ_AP022494 Location: 2105547..2180610 Organism: Citrobacter portucalensis strain STN0717-36 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF47_RS09955 () | 2101681..2103492 | + | 1812 | WP_200927077.1 | phosphogluconate dehydratase | - |
| JLF47_RS09960 () | 2103527..2104168 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JLF47_RS09965 () | 2104236..2105414 | - | 1179 | WP_126957910.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JLF47_RS09970 () | 2105547..2105837 | + | 291 | WP_003833810.1 | DNA damage-inducible protein YebG | - |
| JLF47_RS09975 () | 2105959..2106312 | + | 354 | WP_126957912.1 | hypothetical protein | - |
| JLF47_RS09980 () | 2106407..2107066 | + | 660 | WP_003833804.1 | tellurite resistance TerB family protein | - |
| JLF47_RS09985 () | 2107153..2109207 | + | 2055 | WP_186336565.1 | oligopeptidase B | - |
| JLF47_RS09990 () | 2109198..2109860 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| JLF47_RS09995 () | 2109884..2110540 | - | 657 | WP_003833801.1 | carbon-nitrogen hydrolase family protein | - |
| JLF47_RS10000 () | 2110647..2110877 | - | 231 | WP_003833800.1 | DNA polymerase III subunit theta | - |
| JLF47_RS10005 () | 2111021..2111395 | + | 375 | WP_003833799.1 | CopC domain-containing protein YobA | - |
| JLF47_RS10010 () | 2111399..2112271 | + | 873 | WP_003833795.1 | copper homeostasis membrane protein CopD | - |
| JLF47_RS10015 () | 2112292..2112630 | + | 339 | WP_003833793.1 | YebY family protein | - |
| - () | 2112751..2112894 | - | 144 | - | - | Antitoxin Detail |
| - () | 2112786..2112889 | + | 104 | - | - | Toxin Detail |
| JLF47_RS10020 () | 2112967..2114052 | - | 1086 | WP_153752806.1 | hypothetical protein ; Integrase | Integrase |
| JLF47_RS10025 () | 2114021..2114293 | - | 273 | WP_016156226.1 | hypothetical protein | - |
| JLF47_RS10030 () | 2114358..2114600 | - | 243 | WP_003841647.1 | DUF4060 family protein | - |
| JLF47_RS10035 () | 2114783..2115127 | - | 345 | WP_054528498.1 | hypothetical protein | - |
| JLF47_RS10040 () | 2115162..2116247 | - | 1086 | WP_200921465.1 | recombinase RecT | - |
| JLF47_RS10045 () | 2116259..2119114 | - | 2856 | WP_200921466.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| JLF47_RS10050 () | 2119255..2119416 | - | 162 | WP_200921467.1 | hypothetical protein | - |
| JLF47_RS10055 () | 2119428..2119634 | - | 207 | WP_016156718.1 | hypothetical protein | - |
| JLF47_RS10060 () | 2120017..2120211 | + | 195 | WP_071667478.1 | hypothetical protein | - |
| JLF47_RS10065 () | 2120317..2120514 | + | 198 | WP_128612435.1 | hypothetical protein | - |
| JLF47_RS10070 () | 2120790..2121770 | + | 981 | WP_000082736.1 | IS5 family transposase ISEc68 | Transposase |
| JLF47_RS10075 () | 2121881..2122027 | - | 147 | WP_200927078.1 | hypothetical protein | - |
| JLF47_RS10080 () | 2122033..2122497 | - | 465 | WP_071667480.1 | hypothetical protein | - |
| JLF47_RS10085 () | 2122541..2122936 | - | 396 | WP_071667481.1 | helix-turn-helix domain-containing protein | - |
| JLF47_RS10090 () | 2123040..2123273 | + | 234 | WP_124021115.1 | helix-turn-helix domain-containing protein | - |
| JLF47_RS10095 () | 2123276..2123815 | + | 540 | WP_200921468.1 | toxin YdaT domain-containing protein | - |
| JLF47_RS10100 () | 2123983..2124930 | + | 948 | WP_200927079.1 | hypothetical protein | - |
| JLF47_RS10105 () | 2124933..2125682 | + | 750 | WP_200921469.1 | IS21 family transposase ISRel5 | Transposase |
| JLF47_RS10110 () | 2125701..2126012 | + | 312 | WP_200921470.1 | hypothetical protein | - |
| JLF47_RS10115 () | 2126009..2126497 | + | 489 | WP_200921633.1 | hypothetical protein | - |
| JLF47_RS10120 () | 2126494..2126682 | + | 189 | WP_163199177.1 | hypothetical protein | - |
| JLF47_RS10125 () | 2126679..2127095 | + | 417 | WP_200921471.1 | hypothetical protein | - |
| JLF47_RS10130 () | 2127100..2127300 | + | 201 | WP_142972720.1 | hypothetical protein | - |
| JLF47_RS10135 () | 2127613..2128152 | + | 540 | WP_171859136.1 | DUF551 domain-containing protein | - |
| JLF47_RS10140 () | 2128381..2128638 | + | 258 | WP_016156704.1 | hypothetical protein | - |
| JLF47_RS10145 () | 2128629..2130668 | + | 2040 | WP_200921594.1 | DNA cytosine methyltransferase | - |
| JLF47_RS10150 () | 2130814..2131047 | + | 234 | WP_137366714.1 | DinI-like family protein | - |
| JLF47_RS10155 () | 2131165..2131413 | + | 249 | WP_075862010.1 | hypothetical protein | - |
| JLF47_RS10160 () | 2131448..2132047 | + | 600 | WP_200921472.1 | DUF1367 family protein | - |
| JLF47_RS10165 () | 2132047..2132253 | + | 207 | WP_024166998.1 | hypothetical protein | - |
| JLF47_RS10170 () | 2132256..2132867 | + | 612 | WP_200921473.1 | recombination protein NinG | - |
| JLF47_RS10175 () | 2132864..2133004 | + | 141 | WP_200921474.1 | YlcG family protein | - |
| JLF47_RS10180 () | 2133001..2133822 | + | 822 | WP_200921475.1 | antitermination protein | - |
| JLF47_RS10185 () | 2134077..2134355 | + | 279 | WP_127674224.1 | holin | - |
| JLF47_RS10190 () | 2134327..2134875 | + | 549 | WP_200921476.1 | lysozyme | - |
| JLF47_RS10195 () | 2134872..2135402 | + | 531 | WP_200923015.1 | hypothetical protein | - |
| JLF47_RS10200 () | 2135414..2136007 | - | 594 | WP_127674227.1 | hypothetical protein | - |
| JLF47_RS10205 () | 2136131..2137117 | + | 987 | WP_200921477.1 | terminase small subunit | - |
| JLF47_RS10210 () | 2137095..2138399 | + | 1305 | WP_200921478.1 | terminase family protein | - |
| JLF47_RS10215 () | 2138404..2139807 | + | 1404 | WP_200921479.1 | DUF4055 domain-containing protein | - |
| JLF47_RS10220 () | 2139809..2140915 | + | 1107 | WP_200921480.1 | hypothetical protein | - |
| JLF47_RS10225 () | 2141236..2141988 | + | 753 | WP_016156687.1 | hypothetical protein | - |
| JLF47_RS10230 () | 2142006..2143145 | + | 1140 | WP_200921481.1 | P22 coat - protein 5 family protein | - |
| JLF47_RS10235 () | 2143185..2143436 | + | 252 | WP_200927080.1 | hypothetical protein | - |
| JLF47_RS10240 () | 2143439..2143921 | + | 483 | WP_200921483.1 | hypothetical protein | - |
| JLF47_RS10245 () | 2143923..2144276 | + | 354 | WP_200921484.1 | hypothetical protein | - |
| JLF47_RS10250 () | 2144279..2144878 | + | 600 | WP_047416527.1 | hypothetical protein | - |
| JLF47_RS10255 () | 2144868..2145314 | + | 447 | WP_047416529.1 | DUF4128 domain-containing protein | - |
| JLF47_RS10260 () | 2145360..2146292 | + | 933 | WP_200921485.1 | immunoglobulin domain-containing protein | - |
| JLF47_RS10265 () | 2146334..2146672 | + | 339 | WP_137366709.1 | hypothetical protein | - |
| JLF47_RS10270 () | 2146690..2146977 | + | 288 | WP_200921486.1 | DUF1799 domain-containing protein | - |
| JLF47_RS10275 () | 2146977..2150555 | + | 3579 | WP_200921487.1 | phage tail tape measure protein | - |
| JLF47_RS10280 () | 2150555..2150779 | + | 225 | WP_049041295.1 | hypothetical protein | - |
| JLF47_RS10285 () | 2150842..2151252 | + | 411 | WP_175330120.1 | hypothetical protein | - |
| JLF47_RS10290 () | 2151428..2152042 | + | 615 | WP_121581564.1 | hypothetical protein | - |
| JLF47_RS10295 () | 2152039..2152413 | + | 375 | WP_121581562.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| JLF47_RS10300 () | 2152477..2152827 | + | 351 | WP_175330124.1 | phage tail protein | - |
| JLF47_RS10305 () | 2152836..2153609 | + | 774 | WP_200921488.1 | phage minor tail protein L | - |
| JLF47_RS10310 () | 2153622..2154353 | + | 732 | WP_121581556.1 | C40 family peptidase | - |
| JLF47_RS10315 () | 2154341..2154934 | + | 594 | WP_019076579.1 | tail assembly protein | - |
| JLF47_RS10320 () | 2154990..2158190 | + | 3201 | WP_200921489.1 | DUF1983 domain-containing protein | - |
| JLF47_RS10325 () | 2158183..2158503 | + | 321 | WP_200921490.1 | hypothetical protein | - |
| JLF47_RS10330 () | 2158503..2159183 | + | 681 | WP_200923016.1 | hypothetical protein | - |
| JLF47_RS10335 () | 2159242..2160603 | + | 1362 | WP_200921436.1 | phage tail protein | - |
| JLF47_RS10340 () | 2160738..2160980 | - | 243 | WP_200921493.1 | DinI family protein | - |
| JLF47_RS10345 () | 2161058..2161477 | + | 420 | WP_200921437.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JLF47_RS10350 () | 2161480..2162748 | + | 1269 | WP_200921438.1 | Y-family DNA polymerase | - |
| JLF47_RS10355 () | 2162741..2163412 | - | 672 | WP_200921494.1 | SOS response-associated peptidase | - |
| JLF47_RS10360 () | 2163898..2164539 | + | 642 | WP_200921495.1 | protein-serine/threonine phosphatase | - |
| JLF47_RS10365 () | 2164540..2164731 | - | 192 | WP_003833789.1 | YebW family protein | - |
| JLF47_RS10370 () | 2164834..2165070 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| JLF47_RS10375 () | 2165171..2166559 | - | 1389 | WP_200921595.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JLF47_RS10380 () | 2166675..2169308 | - | 2634 | WP_063940870.1 | hypothetical protein | VF |
| JLF47_RS10385 () | 2169277..2170560 | - | 1284 | WP_003833783.1 | membrane integrity lipid transport subunit YebS | - |
| JLF47_RS10390 () | 2170689..2171186 | + | 498 | WP_003833782.1 | GAF domain-containing protein | - |
| JLF47_RS10395 () | 2171283..2171969 | + | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| JLF47_RS10400 () | 2171989..2174037 | + | 2049 | WP_048235216.1 | carboxy terminal-processing peptidase | - |
| JLF47_RS10405 () | 2174230..2175111 | + | 882 | WP_003034964.1 | protease HtpX | - |
| JLF47_RS10410 () | 2175159..2176532 | - | 1374 | WP_003833779.1 | MFS transporter | - |
| JLF47_RS10415 () | 2176707..2177498 | + | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| JLF47_RS10420 () | 2177613..2177852 | - | 240 | WP_003034975.1 | membrane protein | - |
| JLF47_RS10425 () | 2177999..2178946 | - | 948 | WP_023356254.1 | IS30 family transposase ISSde3 | Transposase |
| JLF47_RS10430 () | 2179106..2179249 | + | 144 | WP_003833775.1 | PhoP/PhoQ regulator MgrB | - |
| JLF47_RS10435 () | 2179324..2179608 | + | 285 | WP_003833774.1 | YebO family protein | - |
| JLF47_RS10440 () | 2180245..2180388 | + | 144 | WP_003034983.1 | YobF family protein | - |
| JLF47_RS10445 () | 2180401..2180610 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JLF47_RS10450 () | 2180830..2182575 | + | 1746 | WP_003833773.1 | peptidoglycan glycosyltransferase FtsI | - |
| JLF47_RS10455 () | 2182639..2183448 | + | 810 | WP_197385804.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JLF47_RS10460 () | 2183445..2184011 | - | 567 | WP_003021013.1 | manganese efflux pump MntP | - |
| JLF47_RS10465 () | 2184446..2184904 | - | 459 | WP_003021010.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|