MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 96752 bp
Accession: NZ_AP022465 Location: 3666230..3762981 Organism: Enterobacter roggenkampii strain STW0522-66 Replicon: chromosome
Accession: NZ_AP022465 Location: 3666230..3762981 Organism: Enterobacter roggenkampii strain STW0522-66 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF42_RS17470 () | 3661592..3662329 | + | 738 | WP_008502469.1 | outer membrane protein assembly factor BamD | - |
| JLF42_RS17475 () | 3662598..3662939 | + | 342 | WP_008502470.1 | ribosome-associated translation inhibitor RaiA | - |
| JLF42_RS17480 () | 3663051..3663098 | + | 48 | WP_100249759.1 | pheA operon leader peptide PheL | - |
| JLF42_RS17485 () | 3663206..3664366 | + | 1161 | WP_021242003.1 | bifunctional chorismate mutase/prephenate dehydratase | - |
| JLF42_RS17490 () | 3664363..3665235 | - | 873 | WP_047747218.1 | SMP-30/gluconolactonase/LRE family protein | - |
| JLF42_RS17495 () | 3665296..3666417 | - | 1122 | WP_008502473.1 | bifunctional chorismate mutase/prephenate dehydrogenase | - |
| JLF42_RS17500 () | 3666428..3667498 | - | 1071 | WP_008502474.1 | 3-deoxy-7-phosphoheptulonate synthase AroF | - |
| JLF42_RS17505 () | 3667713..3668087 | + | 375 | Protein_3431 | DUF2799 domain-containing protein | - |
| JLF42_RS17510 () | 3668226..3668777 | + | 552 | WP_169809168.1 | YfiR family protein | - |
| JLF42_RS17515 () | 3668770..3669990 | + | 1221 | WP_063930166.1 | Diguanylate cyclase DgcN | VF |
| JLF42_RS17520 () | 3670003..3670488 | + | 486 | WP_008502478.1 | Outer membrane protein Omp38 | VF |
| JLF42_RS17525 () | 3670491..3671861 | - | 1371 | WP_055321713.1 | PepSY domain-containing protein | - |
| JLF42_RS17530 () | 3671898..3672302 | - | 405 | WP_008502480.1 | DUF2946 domain-containing protein | - |
| JLF42_RS17535 () | 3672435..3672782 | - | 348 | WP_002914145.1 | 50S ribosomal protein L19 | - |
| JLF42_RS17540 () | 3672826..3673593 | - | 768 | WP_008502493.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| JLF42_RS17545 () | 3673625..3674164 | - | 540 | WP_021241995.1 | ribosome maturation factor RimM | - |
| JLF42_RS17550 () | 3674180..3674428 | - | 249 | WP_003863133.1 | 30S ribosomal protein S16 | - |
| JLF42_RS17555 () | 3674545..3675906 | - | 1362 | WP_008502496.1 | signal recognition particle protein | - |
| JLF42_RS17560 () | 3676073..3676864 | + | 792 | WP_032623031.1 | inner membrane protein YpjD | - |
| JLF42_RS17565 () | 3676883..3678169 | + | 1287 | WP_025759264.1 | HlyC/CorC family transporter | - |
| JLF42_RS17570 () | 3678222..3678815 | - | 594 | WP_008502499.1 | nucleotide exchange factor GrpE | - |
| JLF42_RS17575 () | 3678938..3679816 | + | 879 | WP_008502500.1 | NAD(+) kinase | - |
| JLF42_RS17580 () | 3679902..3681563 | + | 1662 | WP_023325902.1 | DNA repair protein RecN | VF |
| JLF42_RS17585 () | 3681702..3682040 | + | 339 | WP_046091855.1 | outer membrane protein assembly factor BamE | - |
| JLF42_RS17590 () | 3682149..3682436 | - | 288 | WP_023325903.1 | RnfH family protein | - |
| JLF42_RS17595 () | 3682426..3682863 | - | 438 | WP_008502504.1 | type II toxin-antitoxin system RatA family toxin | - |
| JLF42_RS17600 () | 3683020..3683502 | + | 483 | WP_008502505.1 | SsrA-binding protein SmpB | - |
| JLF42_RS17610 () | 3684123..3685343 | + | 1221 | WP_023214645.1 | Prophage integrase IntA ; Integrase | Integrase |
| JLF42_RS17615 () | 3685420..3687165 | + | 1746 | WP_065806225.1 | hypothetical protein | - |
| JLF42_RS17620 () | 3687367..3687831 | - | 465 | WP_065806226.1 | hypothetical protein | - |
| JLF42_RS17625 () | 3687833..3688069 | - | 237 | WP_065806227.1 | hypothetical protein | - |
| JLF42_RS17630 () | 3688066..3688476 | - | 411 | WP_023214641.1 | hypothetical protein | - |
| JLF42_RS17635 () | 3688469..3688819 | - | 351 | WP_023214640.1 | hypothetical protein | - |
| JLF42_RS17640 () | 3688809..3689144 | - | 336 | WP_065806228.1 | hypothetical protein | - |
| JLF42_RS17645 () | 3689141..3689326 | - | 186 | WP_023214638.1 | hypothetical protein | - |
| JLF42_RS17650 () | 3689667..3690968 | + | 1302 | WP_065806229.1 | MobA/MobL family protein | - |
| JLF42_RS17655 () | 3691331..3691825 | + | 495 | WP_023214636.1 | DUF4755 domain-containing protein | - |
| JLF42_RS17660 () | 3691862..3692068 | + | 207 | WP_200925701.1 | hypothetical protein | - |
| JLF42_RS17665 () | 3692109..3693089 | + | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| JLF42_RS17670 () | 3693071..3693439 | + | 369 | WP_200925793.1 | hypothetical protein | - |
| JLF42_RS17675 () | 3694361..3694564 | - | 204 | WP_065806231.1 | AlpA family transcriptional regulator | - |
| JLF42_RS17680 () | 3694841..3695848 | + | 1008 | WP_200036994.1 | restriction endonuclease | - |
| JLF42_RS17685 () | 3695906..3697006 | - | 1101 | WP_065806336.1 | DNA (cytosine-5-)-methyltransferase | - |
| JLF42_RS17690 () | 3697599..3698840 | + | 1242 | WP_063930241.1 | Prophage integrase IntA ; Integrase | Integrase |
| JLF42_RS17695 () | 3699047..3700039 | - | 993 | WP_200925702.1 | hypothetical protein | - |
| JLF42_RS17700 () | 3700083..3700295 | + | 213 | WP_053275353.1 | DNA-binding transcriptional activator AlpA | - |
| JLF42_RS17705 () | 3700424..3701308 | + | 885 | Protein_3470 | DUF3987 domain-containing protein | - |
| JLF42_RS17710 () | 3701434..3702414 | - | 981 | WP_000019441.1 | IS5 family transposase ISKpn26 | Transposase |
| JLF42_RS17715 () | 3702766..3703963 | - | 1198 | Protein_3472 | IS256 family transposase ISEic2 | Transposase |
| JLF42_RS17720 () | 3704181..3704345 | - | 165 | Protein_3473 | transposase domain-containing protein | - |
| JLF42_RS17725 () | 3704290..3704553 | - | 264 | WP_001247776.1 | IS66 family transposase ISPpu19 | Transposase |
| JLF42_RS17730 () | 3704568..3704831 | + | 264 | WP_001295708.1 | hypothetical protein | - |
| JLF42_RS17735 () | 3705060..3705341 | + | 282 | WP_000643630.1 | helix-turn-helix domain-containing protein | - |
| JLF42_RS17740 () | 3705376..3705945 | + | 570 | WP_000350435.1 | Spore protein SP21 | VF |
| JLF42_RS17745 () | 3706051..3708900 | + | 2850 | WP_016154561.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| JLF42_RS17750 () | 3708900..3709040 | + | 141 | WP_016154560.1 | hypothetical protein | - |
| JLF42_RS17755 () | 3709128..3709586 | + | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| JLF42_RS17760 () | 3709609..3710523 | + | 915 | WP_016154559.1 | heat resistance protein YfdX1 | - |
| JLF42_RS17765 () | 3710626..3711513 | + | 888 | WP_016154558.1 | heat resistance protein YfdX2 | - |
| JLF42_RS17770 () | 3711603..3712214 | + | 612 | WP_001090779.1 | heat resistance membrane protein HdeD-GI | - |
| JLF42_RS17775 () | 3712294..3713439 | + | 1146 | WP_016154557.1 | hypothetical protein | - |
| JLF42_RS17780 () | 3713429..3713869 | + | 441 | WP_063930234.1 | heat resistance system thioredoxin Trx-GI | - |
| JLF42_RS17785 () | 3713873..3715588 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| JLF42_RS17790 () | 3715585..3716082 | + | 498 | WP_126289697.1 | heat resistance protein PsiE-GI | - |
| JLF42_RS17795 () | 3716060..3717025 | + | 966 | WP_063930232.1 | M48 family metalloprotease | - |
| JLF42_RS17800 () | 3717050..3718201 | + | 1152 | WP_000323729.1 | Putative serine protease HhoB | VF |
| JLF42_RS17805 () | 3718426..3718995 | - | 570 | Protein_3490 | IS5 family transposase ISThi1 | Transposase |
| JLF42_RS17810 () | 3718991..3719685 | - | 695 | Protein_3491 | IS5 family transposase ISThi1 | Transposase |
| JLF42_RS17815 () | 3720117..3720980 | + | 864 | WP_016154552.1 | GTPase family protein | - |
| JLF42_RS17820 () | 3721072..3721893 | + | 822 | WP_001548153.1 | DUF945 domain-containing protein | - |
| JLF42_RS17825 () | 3722110..3722811 | + | 702 | WP_001581462.1 | WYL domain-containing protein | - |
| JLF42_RS17830 () | 3722852..3723088 | + | 237 | WP_032181217.1 | hypothetical protein | - |
| JLF42_RS17835 () | 3723088..3723531 | + | 444 | WP_001547764.1 | phage transcriptional regulator | - |
| JLF42_RS17840 () | 3723554..3724021 | + | 468 | WP_001547765.1 | hypothetical protein | - |
| JLF42_RS17845 () | 3724098..3724337 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| JLF42_RS17850 () | 3724435..3724893 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| JLF42_RS17855 () | 3724909..3725385 | + | 477 | WP_000811693.1 | RadC family protein | - |
| JLF42_RS17860 () | 3725394..3725615 | + | 222 | WP_044864853.1 | DUF987 domain-containing protein | - |
| JLF42_RS17865 () | 3725634..3725951 | + | 318 | WP_001618790.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JLF42_RS17870 () | 3725972..3726301 | + | 330 | WP_001618791.1 | TA system toxin CbtA family protein | Toxin Detail |
| JLF42_RS17875 () | 3726584..3727345 | + | 762 | WP_021241992.1 | hypothetical protein | - |
| JLF42_RS17885 () | 3728759..3729340 | + | 582 | WP_021241990.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| JLF42_RS17890 () | 3729337..3730002 | + | 666 | WP_021241989.1 | hypothetical protein | - |
| JLF42_RS17895 () | 3730298..3730483 | - | 186 | WP_127341472.1 | hypothetical protein | - |
| JLF42_RS17900 () | 3730492..3730695 | - | 204 | WP_127341473.1 | hypothetical protein | - |
| JLF42_RS17905 () | 3730715..3731371 | - | 657 | WP_021241987.1 | hypothetical protein | - |
| JLF42_RS17910 () | 3731393..3731641 | - | 249 | WP_021241986.1 | hypothetical protein | - |
| JLF42_RS17915 () | 3732052..3733098 | - | 1047 | WP_055322342.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| JLF42_RS17920 () | 3733082..3733858 | - | 777 | WP_055322343.1 | isocitrate lyase/phosphoenolpyruvate mutase family protein | - |
| JLF42_RS17925 () | 3734017..3734214 | - | 198 | Protein_3514 | nucleotidyltransferase domain-containing protein | - |
| JLF42_RS17930 () | 3734601..3734957 | + | 357 | WP_008502540.1 | hypothetical protein | - |
| JLF42_RS17935 () | 3735063..3735623 | + | 561 | WP_023294379.1 | YceI family protein | - |
| JLF42_RS17940 () | 3735615..3736406 | - | 792 | WP_055322359.1 | hypothetical protein | - |
| JLF42_RS17945 () | 3736403..3736960 | - | 558 | WP_055322358.1 | ECF RNA polymerase sigma factor EcfG | VF |
| JLF42_RS17950 () | 3736941..3737468 | - | 528 | WP_008502544.1 | tetratricopeptide repeat protein | - |
| JLF42_RS17955 () | 3738226..3748287 | + | 10062 | WP_063929829.1 | BapA prefix-like domain-containing protein | - |
| JLF42_RS17960 () | 3748368..3749771 | + | 1404 | WP_055322356.1 | TolC family outer membrane protein | - |
| JLF42_RS17965 () | 3749768..3751966 | + | 2199 | WP_055322355.1 | type I secretion system permease/ATPase | - |
| JLF42_RS17970 () | 3751977..3753146 | + | 1170 | WP_085930317.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| JLF42_RS17975 () | 3753230..3753739 | - | 510 | WP_063929828.1 | hypothetical protein | - |
| JLF42_RS17980 () | 3753825..3755006 | - | 1182 | WP_008502551.1 | PLP-dependent aminotransferase family protein | - |
| JLF42_RS17985 () | 3755027..3755914 | - | 888 | WP_055322354.1 | HTH-type transcriptional regulator DmlR | VF |
| JLF42_RS17990 () | 3756012..3756614 | + | 603 | WP_055322353.1 | short chain dehydrogenase | - |
| JLF42_RS17995 () | 3756608..3757342 | - | 735 | WP_025912361.1 | class I SAM-dependent methyltransferase | - |
| JLF42_RS18000 () | 3757469..3758848 | - | 1380 | WP_055321948.1 | amidohydrolase family protein | - |
| JLF42_RS18005 () | 3758850..3759806 | - | 957 | WP_063418104.1 | carbamate kinase family protein | - |
| JLF42_RS18010 () | 3759803..3761356 | - | 1554 | WP_008502557.1 | hypothetical protein | - |
| JLF42_RS18015 () | 3761368..3762783 | - | 1416 | WP_055321950.1 | DUF1116 domain-containing protein | - |
| JLF42_RS18020 () | 3762783..3764324 | - | 1542 | WP_055321951.1 | acyl-CoA synthetase FdrA | - |
| JLF42_RS18025 () | 3764433..3765038 | - | 606 | WP_008502560.1 | ankyrin repeat domain-containing protein | - |
| JLF42_RS18030 () | 3765358..3766287 | + | 930 | WP_055321952.1 | LysR family transcriptional regulator | - |
| JLF42_RS18035 () | 3766284..3766442 | - | 159 | WP_008502562.1 | YqaE/Pmp3 family membrane protein | - |
| JLF42_RS18040 () | 3766624..3766923 | + | 300 | WP_063929827.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JLF42_RS18045 () | 3766933..3767454 | + | 522 | WP_023325942.1 | rhodanese family protein | - |
| JLF42_RS18050 () | 3767534..3767713 | + | 180 | WP_008502565.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|