MGE detailed information
MGE type: Prophage MGE length: 36655 bp
Accession: NZ_AP022399 Location: 669122..705776 Organism: Citrobacter portucalensis strain STW0522-30 Replicon: chromosome
Accession: NZ_AP022399 Location: 669122..705776 Organism: Citrobacter portucalensis strain STW0522-30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF43_RS03245 () | 665334..665918 | + | 585 | WP_003828500.1 | propanediol/glycerol family dehydratase medium subunit | - |
| JLF43_RS03250 () | 665921..666349 | + | 429 | WP_003828498.1 | diol dehydratase small subunit | - |
| JLF43_RS03255 () | 666360..668174 | + | 1815 | WP_003828496.1 | diol dehydratase reactivase subunit alpha | - |
| JLF43_RS03260 () | 668284..668607 | + | 324 | WP_001573898.1 | DUF1889 family protein | - |
| JLF43_RS03265 () | 669122..670438 | + | 1317 | WP_130997209.1 | Prophage integrase IntA ; Integrase | Integrase |
| JLF43_RS03270 () | 670724..670870 | - | 147 | WP_094935882.1 | hypothetical protein | - |
| JLF43_RS03275 () | 671051..672061 | + | 1011 | WP_089561931.1 | hypothetical protein | - |
| JLF43_RS03280 () | 672181..672417 | + | 237 | WP_016243847.1 | AlpA family phage regulatory protein | - |
| JLF43_RS03285 () | 672552..673973 | + | 1422 | WP_097724947.1 | DUF3987 domain-containing protein | - |
| JLF43_RS03290 () | 674099..674725 | + | 627 | WP_089561933.1 | inovirus Gp2 family protein | - |
| JLF43_RS03295 () | 674990..675319 | - | 330 | WP_200923049.1 | HNH endonuclease family protein | - |
| JLF43_RS03300 () | 675431..675919 | - | 489 | Protein_647 | IS3 family transposase ISLad1 | Transposase |
| JLF43_RS03305 () | 676000..677508 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| JLF43_RS03310 () | 678181..678869 | - | 689 | Protein_649 | IS3 family transposase | - |
| JLF43_RS03315 () | 678977..679579 | - | 603 | WP_200922896.1 | helix-turn-helix domain-containing protein | - |
| JLF43_RS03320 () | 679623..680318 | + | 696 | WP_200922895.1 | B3/4 domain-containing protein | - |
| JLF43_RS03325 () | 680339..681232 | + | 894 | WP_200922894.1 | dihydrodipicolinate synthase family protein | - |
| JLF43_RS03330 () | 681682..682248 | + | 567 | WP_200922893.1 | hypothetical protein | - |
| JLF43_RS03335 () | 682648..682932 | - | 285 | WP_200922892.1 | hypothetical protein | - |
| JLF43_RS03340 () | 682960..683445 | - | 486 | WP_200922891.1 | hypothetical protein | - |
| JLF43_RS03345 () | 683523..684220 | + | 698 | Protein_656 | IS1 family transposase IS1R | Transposase |
| JLF43_RS03350 () | 684237..684869 | + | 633 | Protein_657 | IS6 family transposase IS26 | Transposase |
| JLF43_RS03355 () | 684903..685916 | - | 1014 | Protein_658 | putative signaling protein | VF |
| JLF43_RS03360 () | 686022..686969 | + | 948 | WP_023356254.1 | IS30 family transposase ISSde3 | Transposase |
| JLF43_RS03365 () | 686932..688574 | - | 1643 | Protein_660 | diguanylate cyclase | - |
| JLF43_RS03370 () | 688859..689563 | - | 705 | WP_082261900.1 | IS6 family transposase IS26 | Transposase |
| JLF43_RS03375 () | 690370..691067 | + | 698 | Protein_662 | IS1 family transposase IS1R | Transposase |
| JLF43_RS03380 () | 691122..691433 | + | 312 | WP_200922890.1 | hypothetical protein | - |
| JLF43_RS03385 () | 691530..691958 | - | 429 | WP_200922889.1 | organic hydroperoxide resistance protein | - |
| JLF43_RS03390 () | 692218..692997 | - | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| JLF43_RS03395 () | 692997..694019 | - | 1023 | WP_199980491.1 | IS21 family transposase IS100kyp | Transposase |
| JLF43_RS03400 () | 694267..695169 | - | 903 | WP_200922888.1 | LysR family transcriptional regulator | - |
| JLF43_RS03405 () | 695268..695576 | + | 309 | WP_185666326.1 | monooxygenase | - |
| JLF43_RS03410 () | 695713..696585 | - | 873 | WP_200922887.1 | Acetyl esterase | VF |
| JLF43_RS03415 () | 696962..697201 | + | 240 | WP_200922886.1 | YceI family protein | - |
| JLF43_RS03425 () | 698824..699015 | + | 192 | Protein_672 | DUF905 family protein | - |
| JLF43_RS03430 () | 699029..699490 | + | 462 | WP_200922885.1 | antirestriction protein | - |
| JLF43_RS03435 () | 699499..699981 | + | 483 | WP_200922884.1 | DNA repair protein RadC | - |
| JLF43_RS03440 () | 699990..700211 | + | 222 | WP_200922883.1 | DUF987 domain-containing protein | - |
| JLF43_RS03445 () | 700230..700547 | + | 318 | WP_200922882.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JLF43_RS03450 () | 700568..700909 | + | 342 | WP_039025449.1 | TA system toxin CbtA family protein | Toxin Detail |
| JLF43_RS03460 () | 701272..701778 | + | 507 | WP_149281949.1 | G/U mismatch-specific DNA glycosylase | - |
| JLF43_RS03465 () | 701824..703671 | - | 1848 | WP_003024699.1 | RNA polymerase sigma factor RpoD | - |
| JLF43_RS03470 () | 704031..705776 | - | 1746 | WP_200921149.1 | DNA primase | - |
| JLF43_RS03475 () | 706014..706229 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| JLF43_RS03480 () | 706466..707479 | + | 1014 | WP_200921151.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| JLF43_RS03485 () | 707567..708184 | - | 618 | WP_003828463.1 | urease accessory protein UreG | - |
| JLF43_RS03490 () | 708194..708865 | - | 672 | WP_003828461.1 | urease accessory protein UreF | - |
| JLF43_RS03495 () | 708865..709323 | - | 459 | WP_200921153.1 | urease accessory protein UreE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|