MGE detailed information
MGE type: Prophage MGE length: 32602 bp
Accession: NZ_AP022394 Location: 4187592..4220193 Organism: Citrobacter portucalensis strain STW0522-27 Replicon: chromosome
Accession: NZ_AP022394 Location: 4187592..4220193 Organism: Citrobacter portucalensis strain STW0522-27 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF33_RS20065 () | 4182725..4184470 | + | 1746 | WP_200921149.1 | DNA primase | - |
| JLF33_RS20070 () | 4184830..4186677 | + | 1848 | WP_003024699.1 | RNA polymerase sigma factor RpoD | - |
| JLF33_RS20075 () | 4186723..4187229 | - | 507 | WP_149281949.1 | G/U mismatch-specific DNA glycosylase | - |
| JLF33_RS20085 () | 4187592..4187933 | - | 342 | WP_039025449.1 | TA system toxin CbtA family protein | Toxin Detail |
| JLF33_RS20090 () | 4187954..4188271 | - | 318 | WP_200922882.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JLF33_RS20095 () | 4188290..4188511 | - | 222 | WP_200922883.1 | DUF987 domain-containing protein | - |
| JLF33_RS20100 () | 4188520..4189002 | - | 483 | WP_200922884.1 | DNA repair protein RadC | - |
| JLF33_RS20105 () | 4189011..4189472 | - | 462 | WP_200922885.1 | antirestriction protein | - |
| JLF33_RS20110 () | 4189602..4190549 | - | 948 | WP_023356254.1 | IS30 family transposase ISSde3 | Transposase |
| JLF33_RS20115 () | 4190611..4190766 | - | 156 | Protein_3950 | DUF905 family protein | - |
| JLF33_RS20120 () | 4191147..4192354 | + | 1208 | WP_200923048.1 | IS3 family transposase ISEcl1 | Transposase |
| JLF33_RS20125 () | 4192389..4192628 | - | 240 | WP_200922886.1 | YceI family protein | - |
| JLF33_RS20130 () | 4193005..4193877 | + | 873 | WP_200922887.1 | Acetyl esterase | VF |
| JLF33_RS20135 () | 4194014..4194322 | - | 309 | WP_185666326.1 | monooxygenase | - |
| JLF33_RS20140 () | 4194421..4195323 | + | 903 | WP_200922888.1 | LysR family transcriptional regulator | - |
| JLF33_RS20145 () | 4195571..4196593 | + | 1023 | WP_199980491.1 | IS21 family transposase IS100kyp | Transposase |
| JLF33_RS20150 () | 4196593..4197372 | + | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| JLF33_RS20155 () | 4197632..4198060 | + | 429 | WP_200922889.1 | organic hydroperoxide resistance protein | - |
| JLF33_RS20160 () | 4198157..4198468 | - | 312 | WP_200922890.1 | hypothetical protein | - |
| JLF33_RS20165 () | 4198523..4199220 | - | 698 | Protein_3960 | IS1 family transposase IS1R | Transposase |
| JLF33_RS20170 () | 4200027..4200731 | + | 705 | WP_082261900.1 | IS6 family transposase IS26 | Transposase |
| JLF33_RS20175 () | 4201016..4203598 | + | 2583 | WP_116289014.1 | putative signaling protein | VF |
| JLF33_RS20180 () | 4203632..4204264 | - | 633 | Protein_3963 | IS6 family transposase IS26 | Transposase |
| JLF33_RS20185 () | 4204281..4204978 | - | 698 | Protein_3964 | IS1 family transposase IS1R | Transposase |
| JLF33_RS20190 () | 4205056..4205541 | + | 486 | WP_200922891.1 | hypothetical protein | - |
| JLF33_RS20195 () | 4205569..4205853 | + | 285 | WP_200922892.1 | hypothetical protein | - |
| JLF33_RS20200 () | 4206253..4206819 | - | 567 | WP_200922893.1 | hypothetical protein | - |
| JLF33_RS20205 () | 4207269..4208162 | - | 894 | WP_200922894.1 | dihydrodipicolinate synthase family protein | - |
| JLF33_RS20210 () | 4208183..4208878 | - | 696 | WP_200922895.1 | B3/4 domain-containing protein | - |
| JLF33_RS20215 () | 4208922..4209524 | + | 603 | WP_200922896.1 | helix-turn-helix domain-containing protein | - |
| JLF33_RS20220 () | 4209632..4210320 | + | 689 | Protein_3971 | IS3 family transposase | - |
| JLF33_RS20225 () | 4210993..4212501 | + | 1509 | WP_033147074.1 | group II intron reverse transcriptase/maturase | - |
| JLF33_RS20230 () | 4212582..4213070 | + | 489 | Protein_3973 | IS3 family transposase ISLad1 | Transposase |
| JLF33_RS20235 () | 4213182..4213511 | + | 330 | WP_200923049.1 | HNH endonuclease family protein | - |
| JLF33_RS20240 () | 4213776..4214402 | - | 627 | WP_089561933.1 | inovirus Gp2 family protein | - |
| JLF33_RS20245 () | 4214528..4215949 | - | 1422 | WP_097724947.1 | DUF3987 domain-containing protein | - |
| JLF33_RS20250 () | 4216084..4216320 | - | 237 | WP_016243847.1 | AlpA family phage regulatory protein | - |
| JLF33_RS20255 () | 4216440..4217450 | - | 1011 | WP_089561931.1 | hypothetical protein | - |
| JLF33_RS20260 () | 4217631..4217777 | + | 147 | WP_094935882.1 | hypothetical protein | - |
| JLF33_RS20265 () | 4218063..4219379 | - | 1317 | WP_130997209.1 | Prophage integrase IntA ; Integrase | Integrase |
| JLF33_RS20270 () | 4219894..4220217 | - | 324 | WP_001573898.1 | DUF1889 family protein | - |
| JLF33_RS20275 () | 4220327..4222141 | - | 1815 | WP_003828496.1 | diol dehydratase reactivase subunit alpha | - |
| JLF33_RS20280 () | 4222152..4222580 | - | 429 | WP_003828498.1 | diol dehydratase small subunit | - |
| JLF33_RS20285 () | 4222583..4223167 | - | 585 | WP_003828500.1 | propanediol/glycerol family dehydratase medium subunit | - |
| JLF33_RS20290 () | 4223179..4224846 | - | 1668 | WP_003828502.1 | propanediol/glycerol family dehydratase large subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|