MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 107087 bp
Accession: NZ_AP022389 Location: 4578929..4686015 Organism: Citrobacter portucalensis strain STW0522-26 Replicon: chromosome
Accession: NZ_AP022389 Location: 4578929..4686015 Organism: Citrobacter portucalensis strain STW0522-26 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF45_RS21915 () | 4575724..4576758 | - | 1035 | WP_069602498.1 | Abi family protein | - |
| JLF45_RS21920 () | 4576898..4577479 | - | 582 | WP_069602497.1 | hypothetical protein | - |
| JLF45_RS21925 () | 4577959..4578249 | + | 291 | WP_032638117.1 | hypothetical protein | - |
| JLF45_RS21930 () | 4578380..4578910 | + | 531 | WP_200920892.1 | hypothetical protein | - |
| JLF45_RS21935 () | 4578929..4579705 | + | 777 | WP_200920893.1 | site-specific integrase | - |
| JLF45_RS21940 () | 4579907..4580164 | + | 258 | Protein_4300 | site-specific integrase | - |
| JLF45_RS21945 () | 4580408..4581418 | - | 1011 | WP_015572055.1 | RepB family plasmid replication initiator protein | - |
| JLF45_RS21950 () | 4582159..4583325 | + | 1167 | WP_023327689.1 | plasmid-partitioning protein SopA | - |
| JLF45_RS21955 () | 4583325..4584290 | + | 966 | WP_013087134.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JLF45_RS21960 () | 4584853..4586124 | - | 1272 | WP_200920894.1 | Y-family DNA polymerase | - |
| JLF45_RS21965 () | 4586124..4586555 | - | 432 | WP_013087136.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JLF45_RS21970 () | 4586786..4587757 | + | 972 | WP_081330987.1 | StbA family protein | - |
| JLF45_RS21975 () | 4587760..4588422 | + | 663 | WP_049022775.1 | plasmid partitioning/stability family protein | - |
| JLF45_RS21980 () | 4588426..4588671 | + | 246 | WP_122008480.1 | hypothetical protein | - |
| JLF45_RS21985 () | 4588718..4588921 | + | 204 | WP_013087140.1 | hypothetical protein | - |
| JLF45_RS21990 () | 4589286..4589753 | + | 468 | WP_200920895.1 | hypothetical protein | - |
| JLF45_RS21995 () | 4589875..4590315 | + | 441 | Protein_4311 | transposase | - |
| JLF45_RS22000 () | 4590352..4590702 | + | 351 | Protein_4312 | PadR family transcriptional regulator | - |
| JLF45_RS22005 () | 4590699..4592144 | - | 1446 | WP_200920896.1 | HAMP domain-containing protein | - |
| JLF45_RS22010 () | 4592232..4592929 | + | 698 | Protein_4314 | IS1 family transposase | - |
| JLF45_RS22015 () | 4592947..4593546 | + | 600 | WP_200920897.1 | cellulose biosynthesis protein BcsO | - |
| JLF45_RS22020 () | 4593537..4594340 | + | 804 | WP_025760128.1 | cellulose synthase operon protein YhjQ | - |
| JLF45_RS22025 () | 4594358..4596472 | + | 2115 | WP_025760129.1 | UDP-forming cellulose synthase catalytic subunit | - |
| JLF45_RS22030 () | 4596469..4598763 | + | 2295 | WP_069602393.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| JLF45_RS22035 () | 4598777..4602817 | + | 4041 | WP_200920898.1 | cellulose biosynthesis protein BcsC | - |
| JLF45_RS22040 () | 4602817..4603296 | + | 480 | WP_025760132.1 | cellulose synthase | - |
| JLF45_RS22045 () | 4603305..4604303 | + | 999 | WP_025760133.1 | endoglucanase | - |
| JLF45_RS22050 () | 4604430..4604519 | - | 90 | Protein_4322 | cellulose biosynthesis protein BcsG | - |
| JLF45_RS22055 () | 4604550..4604822 | + | 273 | Protein_4323 | DsbA family protein | - |
| JLF45_RS22060 () | 4604814..4605319 | - | 506 | Protein_4324 | transposase | - |
| JLF45_RS22065 () | 4605474..4605686 | - | 213 | WP_161989521.1 | hypothetical protein | - |
| JLF45_RS22070 () | 4605615..4605782 | + | 168 | WP_004118231.1 | integrase | - |
| JLF45_RS22075 () | 4606067..4607194 | + | 1128 | WP_004118840.1 | transporter substrate-binding protein | - |
| JLF45_RS22080 () | 4607191..4607784 | + | 594 | WP_004118229.1 | ANTAR domain-containing protein | - |
| JLF45_RS22085 () | 4607781..4608629 | + | 849 | WP_004118228.1 | ABC transporter permease | - |
| JLF45_RS22090 () | 4608629..4609549 | + | 921 | WP_004118227.1 | ABC transporter permease | - |
| JLF45_RS22095 () | 4609562..4611166 | + | 1605 | WP_004152278.1 | ABC transporter substrate-binding protein | - |
| JLF45_RS22100 () | 4611211..4612158 | + | 948 | WP_004118225.1 | acetamidase/formamidase family protein | - |
| JLF45_RS22105 () | 4612166..4613899 | + | 1734 | WP_069602392.1 | ABC transporter ATP-binding protein | - |
| JLF45_RS22110 () | 4614075..4614521 | + | 447 | Protein_4334 | creatininase family protein | - |
| JLF45_RS22115 () | 4615141..4615678 | + | 538 | Protein_4335 | DUF2913 family protein | - |
| JLF45_RS22120 () | 4615860..4616864 | - | 1005 | WP_022542389.1 | IS110-like element IS4321 family transposase | - |
| JLF45_RS22125 () | 4616943..4619927 | - | 2985 | WP_049014947.1 | Tn3 family transposase | - |
| JLF45_RS22130 () | 4620087..4620665 | + | 579 | WP_004206571.1 | recombinase family protein | - |
| JLF45_RS22135 () | 4620841..4622046 | + | 1206 | WP_049015982.1 | chromate efflux transporter | - |
| JLF45_RS22140 () | 4622057..4622362 | + | 306 | WP_004206574.1 | PadR family transcriptional regulator | - |
| JLF45_RS22145 () | 4622494..4622931 | + | 438 | Protein_4341 | arsenical efflux pump membrane protein ArsB | - |
| JLF45_RS22150 () | 4622944..4623369 | + | 426 | WP_070558872.1 | glutaredoxin-dependent arsenate reductase | - |
| JLF45_RS22155 () | 4623544..4624548 | + | 1005 | WP_022542389.1 | IS110-like element IS4321 family transposase | - |
| JLF45_RS22160 () | 4624767..4625528 | - | 762 | WP_045890904.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| JLF45_RS22165 () | 4625661..4625915 | - | 255 | Protein_4345 | peptide-methionine (S)-S-oxide reductase | - |
| JLF45_RS22170 () | 4626172..4626341 | + | 170 | Protein_4346 | IS110 family transposase | - |
| JLF45_RS22175 () | 4626389..4626640 | - | 252 | WP_032656042.1 | hypothetical protein | - |
| JLF45_RS22180 () | 4627247..4627549 | + | 303 | WP_029403837.1 | type II toxin-antitoxin system HigB family toxin | - |
| JLF45_RS22185 () | 4627555..4627914 | + | 360 | WP_032656046.1 | transcriptional regulator | - |
| JLF45_RS22190 () | 4627974..4628468 | + | 495 | WP_032656049.1 | thermonuclease family protein | - |
| JLF45_RS22195 () | 4628481..4628980 | + | 500 | Protein_4351 | hypothetical protein | - |
| JLF45_RS22200 () | 4629325..4630095 | + | 771 | WP_032656053.1 | conjugal transfer protein TraX | - |
| JLF45_RS22205 () | 4630110..4630433 | + | 324 | WP_032656054.1 | hypothetical protein | - |
| JLF45_RS22210 () | 4630411..4630800 | - | 390 | Protein_4354 | DUF4225 domain-containing protein | - |
| JLF45_RS22215 () | 4631079..4632083 | - | 1005 | WP_022542389.1 | IS110-like element IS4321 family transposase | - |
| JLF45_RS22220 () | 4632271..4632879 | + | 609 | WP_061873717.1 | TetR/AcrR family transcriptional regulator | - |
| JLF45_RS22225 () | 4632876..4634027 | + | 1152 | WP_016236501.1 | efflux RND transporter periplasmic adaptor subunit | - |
| JLF45_RS22230 () | 4634024..4635229 | + | 1206 | WP_022652303.1 | ABC transporter permease | - |
| JLF45_RS22235 () | 4635231..4635941 | + | 711 | WP_004393997.1 | ABC transporter ATP-binding protein | - |
| JLF45_RS22240 () | 4635970..4636443 | + | 474 | WP_003056106.1 | cytochrome c | - |
| JLF45_RS22245 () | 4636430..4637917 | + | 1488 | WP_048242289.1 | efflux transporter outer membrane subunit | - |
| JLF45_RS22250 () | 4638048..4638605 | + | 558 | WP_001162010.1 | recombinase family protein | - |
| JLF45_RS22255 () | 4638608..4640005 | + | 1398 | WP_045269836.1 | DUF4158 domain-containing protein | - |
| JLF45_RS22260 () | 4640084..4641088 | + | 1005 | WP_000427614.1 | IS110-like element IS5075 family transposase | - |
| JLF45_RS22265 () | 4641548..4641868 | + | 321 | WP_001137910.1 | DUF134 domain-containing protein | - |
| JLF45_RS22270 () | 4641843..4642304 | + | 462 | WP_000626969.1 | hypothetical protein | - |
| JLF45_RS22275 () | 4642642..4642902 | + | 261 | WP_017901299.1 | thioesterase | - |
| JLF45_RS22280 () | 4643017..4643493 | + | 477 | WP_000043177.1 | DNA starvation/stationary phase protection protein | - |
| JLF45_RS22285 () | 4643798..4644148 | - | 351 | WP_000928911.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JLF45_RS22290 () | 4644309..4645967 | + | 1659 | WP_025760366.1 | FAD-dependent oxidoreductase | - |
| JLF45_RS22295 () | 4646231..4646872 | - | 642 | WP_045269835.1 | recombinase family protein | - |
| JLF45_RS22300 () | 4647040..4650027 | + | 2988 | WP_016241615.1 | Tn3 family transposase | - |
| JLF45_RS22305 () | 4650206..4651174 | + | 969 | WP_200920899.1 | IS5 family transposase | - |
| JLF45_RS22310 () | 4651231..4651599 | + | 369 | Protein_4374 | ATP-binding protein | - |
| JLF45_RS22315 () | 4651797..4652015 | + | 219 | Protein_4375 | transglycosylase | - |
| JLF45_RS22320 () | 4652026..4652325 | + | 300 | WP_050010005.1 | TrbC/VirB2 family protein | - |
| JLF45_RS22325 () | 4652335..4653231 | + | 897 | Protein_4377 | VirB3 family type IV secretion system protein | - |
| JLF45_RS22330 () | 4653296..4654000 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JLF45_RS22335 () | 4654097..4654273 | + | 177 | Protein_4379 | IS1 family transposase | - |
| JLF45_RS22340 () | 4654336..4654821 | - | 486 | WP_013087269.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JLF45_RS22345 () | 4654809..4655075 | - | 267 | WP_007869691.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JLF45_RS22350 () | 4655728..4656741 | + | 1014 | WP_069602377.1 | replication initiation protein | - |
| JLF45_RS22355 () | 4657621..4658427 | + | 807 | WP_032638095.1 | DUF4225 domain-containing protein | - |
| JLF45_RS22360 () | 4658402..4658728 | - | 327 | WP_032638096.1 | hypothetical protein | - |
| JLF45_RS22365 () | 4658859..4659629 | - | 771 | WP_032638097.1 | conjugal transfer protein TraX | - |
| JLF45_RS22370 () | 4659997..4660521 | - | 525 | WP_080286651.1 | hypothetical protein | - |
| JLF45_RS22375 () | 4660663..4660923 | + | 261 | WP_013087106.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| JLF45_RS22380 () | 4660910..4661206 | + | 297 | WP_032638098.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JLF45_RS22385 () | 4661362..4661994 | + | 633 | WP_001567369.1 | hypothetical protein | - |
| JLF45_RS22390 () | 4662023..4663426 | - | 1404 | WP_001567368.1 | ISNCY-like element ISKpn21 family transposase | - |
| JLF45_RS22395 () | 4663713..4664147 | - | 435 | WP_004388336.1 | copper resistance system metallochaperone PcoE | - |
| JLF45_RS22400 () | 4664363..4665763 | - | 1401 | WP_032638101.1 | copper resistance membrane spanning protein PcoS | - |
| JLF45_RS22405 () | 4665760..4666440 | - | 681 | WP_001188930.1 | copper response regulator transcription factor PcoR | - |
| JLF45_RS22410 () | 4666495..4667424 | - | 930 | WP_000998778.1 | copper resistance inner membrane protein PcoD | - |
| JLF45_RS22415 () | 4667429..4667809 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| JLF45_RS22420 () | 4667849..4668739 | - | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| JLF45_RS22425 () | 4668745..4670562 | - | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| JLF45_RS22430 () | 4670797..4671246 | + | 450 | WP_001023257.1 | copper resistance protein | - |
| JLF45_RS22435 () | 4671535..4672272 | + | 738 | WP_000287501.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| JLF45_RS22440 () | 4672306..4672503 | - | 198 | WP_000843494.1 | DUF2933 domain-containing protein | - |
| JLF45_RS22445 () | 4672544..4674991 | - | 2448 | WP_023331515.1 | Ag(+)-translocating P-type ATPase SilP | - |
| JLF45_RS22450 () | 4675118..4675558 | - | 441 | WP_000758228.1 | hypothetical protein | - |
| JLF45_RS22455 () | 4675645..4678791 | - | 3147 | WP_032620969.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| JLF45_RS22460 () | 4678802..4680094 | - | 1293 | WP_000157620.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| JLF45_RS22465 () | 4680208..4680561 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| JLF45_RS22470 () | 4680589..4681974 | - | 1386 | WP_048242262.1 | Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC | - |
| JLF45_RS22475 () | 4682164..4682844 | + | 681 | WP_000697970.1 | copper/silver response regulator transcription factor SilR | - |
| JLF45_RS22480 () | 4682837..4684312 | + | 1476 | WP_001548141.1 | copper/silver sensor histidine kinase SilS | - |
| JLF45_RS22485 () | 4684563..4684994 | + | 432 | WP_038633721.1 | silver-binding protein SilE | - |
| JLF45_RS22495 () | 4686656..4688377 | - | 1722 | WP_003830679.1 | SulP family inorganic anion transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|