MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 64810 bp
Accession: NZ_AP022379 Location: 1198926..1263735 Organism: Bifidobacterium longum subsp. longum strain JCM 7052 Replicon: chromosome
Accession: NZ_AP022379 Location: 1198926..1263735 Organism: Bifidobacterium longum subsp. longum strain JCM 7052 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLGA_RS05170 () | 1194617..1195156 | + | 540 | WP_032735440.1 | peptidylprolyl isomerase | - |
| BLGA_RS05175 () | 1195253..1195768 | + | 516 | WP_007054376.1 | helix-turn-helix domain-containing protein | - |
| BLGA_RS05180 () | 1195768..1196340 | + | 573 | Protein_996 | IS3 family transposase | - |
| BLGA_RS05185 () | 1196474..1197676 | + | 1203 | WP_007053137.1 | tyrosine-type recombinase/integrase | - |
| BLGA_RS05190 () | 1197673..1198638 | + | 966 | WP_007053138.1 | tyrosine-type recombinase/integrase | - |
| BLGA_RS05195 () | 1198635..1199690 | + | 1056 | WP_007054866.1 | tyrosine-type recombinase/integrase | - |
| BLGA_RS05200 () | 1199805..1200095 | + | 291 | Protein_1000 | IS3 family transposase ISBlo3 | Transposase |
| BLGA_RS05205 () | 1200213..1202537 | - | 2325 | WP_012471819.1 | hypothetical protein | VF |
| BLGA_RS05210 () | 1202671..1203147 | - | 477 | WP_007055963.1 | dUTP diphosphatase | - |
| BLGA_RS05215 () | 1203147..1203440 | - | 294 | WP_007052669.1 | DUF4193 domain-containing protein | - |
| BLGA_RS05220 () | 1203599..1204690 | + | 1092 | WP_007056777.1 | DUF3071 domain-containing protein | - |
| BLGA_RS05225 () | 1204700..1205968 | - | 1269 | WP_007054496.1 | alkaline phosphatase family protein | - |
| BLGA_RS05230 () | 1206219..1208948 | + | 2730 | WP_007052666.1 | DNA topoisomerase IV subunit A | - |
| BLGA_RS05235 () | 1209093..1209881 | + | 789 | WP_007054494.1 | hypothetical protein | VF |
| BLGA_RS05240 () | 1209892..1214625 | - | 4734 | WP_058062643.1 | DEAD/DEAH box helicase | - |
| BLGA_RS05245 () | 1214641..1215633 | - | 993 | WP_007056771.1 | ribokinase | - |
| BLGA_RS05250 () | 1215677..1216903 | - | 1227 | WP_007056778.1 | MFS transporter | - |
| BLGA_RS05255 () | 1217263..1219539 | - | 2277 | WP_010080760.1 | type IIA DNA topoisomerase subunit B | - |
| BLGA_RS05260 () | 1219597..1221021 | - | 1425 | WP_007055162.1 | RNA polymerase sigma factor RpoD | VF |
| BLGA_RS05265 () | 1221224..1221886 | - | 663 | WP_007052659.1 | DUF4192 family protein | - |
| BLGA_RS05270 () | 1222093..1223175 | + | 1083 | WP_007058720.1 | polyprenyl synthetase family protein | - |
| BLGA_RS05275 () | 1223319..1225592 | + | 2274 | WP_011068042.1 | Serine/threonine-protein kinase PknD | VF |
| BLGA_RS05280 () | 1225644..1226348 | - | 705 | WP_007058769.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| BLGA_RS05285 () | 1226409..1227104 | + | 696 | WP_007058765.1 | hypothetical protein | - |
| BLGA_RS05290 () | 1227345..1228391 | - | 1047 | WP_007055165.1 | anthranilate phosphoribosyltransferase | - |
| BLGA_RS05295 () | 1228981..1229334 | + | 354 | WP_065437220.1 | ISL3 family transposase ISTesp2 | Transposase |
| BLGA_RS05300 () | 1229645..1232539 | - | 2895 | WP_007052649.1 | preprotein translocase subunit SecA | - |
| BLGA_RS05305 () | 1232701..1233363 | - | 663 | WP_007052648.1 | ribosome-associated translation inhibitor RaiA | - |
| BLGA_RS05315 () | 1234240..1234833 | - | 594 | WP_032735795.1 | RecX family transcriptional regulator | - |
| BLGA_RS05320 () | 1234836..1236029 | - | 1194 | WP_007052644.1 | recombinase RecA | - |
| BLGA_RS05325 () | 1236330..1236563 | - | 234 | WP_007052642.1 | DUF3046 domain-containing protein | - |
| BLGA_RS05330 () | 1236675..1237190 | - | 516 | WP_007052641.1 | helix-turn-helix transcriptional regulator | - |
| BLGA_RS05335 () | 1237250..1237783 | - | 534 | WP_119107238.1 | CinA family protein | - |
| BLGA_RS05340 () | 1237795..1238430 | - | 636 | WP_007052639.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| BLGA_RS05345 () | 1238607..1241516 | - | 2910 | WP_119107239.1 | DNA translocase FtsK | - |
| BLGA_RS05350 () | 1241728..1242477 | + | 750 | WP_007056215.1 | hypothetical protein | VF |
| BLGA_RS05355 () | 1242511..1243497 | - | 987 | WP_007052636.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| BLGA_RS05360 () | 1243508..1244962 | - | 1455 | WP_007052635.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| BLGA_RS05365 () | 1245094..1245834 | + | 741 | WP_007056209.1 | hypothetical protein | VF |
| BLGA_RS05370 () | 1245867..1246883 | - | 1017 | WP_007052632.1 | DMT family transporter | - |
| BLGA_RS05375 () | 1247023..1247922 | - | 900 | WP_007052631.1 | Bax inhibitor-1/YccA family protein | - |
| BLGA_RS05380 () | 1248103..1248948 | - | 846 | WP_007057205.1 | DUF5067 domain-containing protein | - |
| BLGA_RS05385 () | 1249283..1250515 | + | 1233 | WP_007056207.1 | sensor histidine kinase | - |
| BLGA_RS05390 () | 1250550..1251275 | + | 726 | WP_007056206.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| BLGA_RS05395 () | 1251315..1251956 | + | 642 | WP_007052627.1 | GNAT family N-acetyltransferase | - |
| BLGA_RS05400 () | 1252046..1254151 | + | 2106 | WP_007052626.1 | DUF262 domain-containing protein | - |
| BLGA_RS05405 () | 1254213..1254704 | - | 492 | WP_007054468.1 | PIN domain-containing protein | Toxin Detail |
| BLGA_RS05410 () | 1254704..1255066 | - | 363 | WP_008783109.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BLGA_RS05415 () | 1255212..1257911 | - | 2700 | WP_008783110.1 | aconitate hydratase AcnA | - |
| BLGA_RS05420 () | 1258032..1260545 | - | 2514 | WP_011068028.1 | HAD-IC family P-type ATPase | - |
| BLGA_RS05425 () | 1260636..1261331 | - | 696 | WP_007055252.1 | hypothetical protein | - |
| BLGA_RS05430 () | 1261343..1262611 | - | 1269 | WP_162899838.1 | RsmD family RNA methyltransferase | - |
| BLGA_RS05435 () | 1262601..1263359 | - | 759 | WP_058060960.1 | DUF3159 domain-containing protein | - |
| BLGA_RS05440 () | 1263375..1264229 | - | 855 | WP_060618469.1 | DUF3710 domain-containing protein | - |
| BLGA_RS05445 () | 1264354..1265214 | + | 861 | WP_007052617.1 | exodeoxyribonuclease III | - |
| BLGA_RS05450 () | 1265523..1267532 | - | 2010 | WP_007052616.1 | ABC transporter ATP-binding protein | - |
| BLGA_RS05455 () | 1267555..1268559 | - | 1005 | WP_003832139.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|