MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 176648 bp
Accession: NZ_AP022268 Location: 2683236..2859883 Organism: Raoultella ornithinolytica strain WP8-W19-CRE-01 Replicon: chromosome
Accession: NZ_AP022268 Location: 2683236..2859883 Organism: Raoultella ornithinolytica strain WP8-W19-CRE-01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R88_RS12560 () | 2678597..2679439 | - | 843 | WP_015584306.1 | LysR family transcriptional regulator | - |
| H7R88_RS12565 () | 2679531..2680607 | + | 1077 | WP_048023601.1 | nitronate monooxygenase | - |
| H7R88_RS12570 () | 2680634..2681293 | - | 660 | WP_160873165.1 | ABC transporter permease | - |
| H7R88_RS12575 () | 2681290..2682081 | - | 792 | WP_004862124.1 | ATP-binding cassette domain-containing protein | - |
| H7R88_RS12580 () | 2682078..2682884 | - | 807 | WP_004862122.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| H7R88_RS12585 () | 2682908..2683936 | - | 1029 | WP_004862120.1 | isopenicillin N synthase family oxygenase | - |
| H7R88_RS12590 () | 2684222..2684503 | + | 282 | WP_004862116.1 | VF530 family protein | - |
| H7R88_RS12595 () | 2684521..2685468 | - | 948 | WP_004862114.1 | AraC family transcriptional regulator | - |
| H7R88_RS12600 () | 2685577..2686776 | + | 1200 | WP_004862113.1 | MFS transporter | - |
| H7R88_RS12605 () | 2686789..2687268 | - | 480 | WP_088911464.1 | GNAT family N-acetyltransferase | - |
| H7R88_RS12610 () | 2687586..2688860 | + | 1275 | WP_004862108.1 | oxalate/formate MFS antiporter | - |
| H7R88_RS12615 () | 2688932..2690317 | - | 1386 | WP_004862107.1 | Phosphoglycerate transporter protein | VF |
| H7R88_RS12620 () | 2690844..2692037 | + | 1194 | WP_015584313.1 | ABC transporter substrate-binding protein | - |
| H7R88_RS12625 () | 2692034..2694061 | + | 2028 | WP_123629274.1 | HAMP domain-containing protein | - |
| H7R88_RS12630 () | 2694027..2695271 | + | 1245 | WP_183114636.1 | sigma-54 dependent transcriptional regulator | - |
| H7R88_RS12635 () | 2695948..2696748 | + | 801 | WP_004862099.1 | hypothetical protein | - |
| H7R88_RS12640 () | 2696835..2697650 | + | 816 | WP_004862097.1 | DNA/RNA non-specific endonuclease | - |
| H7R88_RS12645 () | 2697762..2698310 | - | 549 | WP_077266760.1 | hypothetical protein | VF |
| H7R88_RS12650 () | 2698350..2698958 | - | 609 | WP_004862093.1 | Galactoside O-acetyltransferase | VF |
| H7R88_RS12655 () | 2699158..2699739 | - | 582 | WP_004862091.1 | nuclear transport factor 2 family protein | - |
| H7R88_RS12660 () | 2699848..2700732 | + | 885 | WP_044351616.1 | LysR family transcriptional regulator | - |
| H7R88_RS12665 () | 2700729..2701964 | - | 1236 | WP_099144428.1 | MFS transporter | - |
| H7R88_RS12670 () | 2702107..2702562 | + | 456 | WP_004862084.1 | helix-turn-helix transcriptional regulator | - |
| H7R88_RS12675 () | 2702642..2703034 | + | 393 | WP_197707176.1 | hypothetical protein | - |
| H7R88_RS12680 () | 2703097..2703987 | - | 891 | WP_044351621.1 | DMT family transporter | - |
| H7R88_RS12685 () | 2704091..2705425 | + | 1335 | WP_183114637.1 | PLP-dependent aminotransferase family protein | - |
| H7R88_RS12690 () | 2705705..2706139 | + | 435 | WP_032717454.1 | GNAT family N-acetyltransferase | - |
| H7R88_RS12695 () | 2706283..2706633 | + | 351 | WP_032724357.1 | hypothetical protein | - |
| H7R88_RS12700 () | 2706974..2707474 | + | 501 | WP_004862067.1 | DUF1003 domain-containing protein | - |
| H7R88_RS12705 () | 2707498..2709372 | + | 1875 | WP_183114638.1 | KUP/HAK/KT family potassium transporter | - |
| H7R88_RS12710 () | 2709588..2710085 | + | 498 | WP_048023692.1 | hypothetical protein | - |
| H7R88_RS12715 () | 2710243..2712168 | - | 1926 | WP_064359428.1 | C1 family peptidase | - |
| H7R88_RS12720 () | 2712810..2713088 | + | 279 | WP_015584326.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| H7R88_RS12725 () | 2713079..2713561 | + | 483 | WP_044351088.1 | GNAT family N-acetyltransferase | Toxin Detail |
| H7R88_RS12730 () | 2714228..2714860 | + | 633 | WP_001567369.1 | hypothetical protein | - |
| H7R88_RS12735 () | 2714889..2716292 | - | 1404 | WP_001567368.1 | ISNCY family transposase ISKpn21 | Transposase |
| H7R88_RS12740 () | 2716486..2716644 | - | 159 | WP_155728879.1 | hypothetical protein | - |
| H7R88_RS12745 () | 2717363..2718238 | - | 876 | WP_032717451.1 | NAD(P)-dependent oxidoreductase | - |
| H7R88_RS12750 () | 2718500..2719216 | - | 717 | WP_004861956.1 | ABC transporter ATP-binding protein | - |
| H7R88_RS12755 () | 2719213..2720088 | - | 876 | WP_032717450.1 | ATP-binding cassette domain-containing protein | - |
| H7R88_RS12760 () | 2720085..2721371 | - | 1287 | WP_015584332.1 | high-affinity branched-chain amino acid ABC transporter permease LivM | - |
| H7R88_RS12765 () | 2721382..2722296 | - | 915 | WP_015584333.1 | branched-chain amino acid ABC transporter permease | - |
| H7R88_RS12770 () | 2722396..2723454 | - | 1059 | WP_162180097.1 | branched-chain amino acid ABC transporter substrate-binding protein | - |
| H7R88_RS12775 () | 2724169..2725575 | + | 1407 | WP_183114649.1 | glycoside hydrolase family 10 protein | - |
| H7R88_RS12780 () | 2725508..2726839 | - | 1332 | WP_183114639.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| H7R88_RS12785 () | 2726839..2727111 | - | 273 | WP_032717448.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| H7R88_RS12790 () | 2727314..2727868 | - | 555 | WP_004861926.1 | RNA polymerase sigma factor | - |
| H7R88_RS12795 () | 2727874..2728299 | - | 426 | WP_032724724.1 | hypothetical protein | - |
| H7R88_RS12800 () | 2728432..2729385 | - | 954 | WP_004861921.1 | hypothetical protein | - |
| H7R88_RS12805 () | 2729599..2730231 | - | 633 | WP_069475943.1 | class I SAM-dependent methyltransferase | - |
| H7R88_RS12810 () | 2730251..2731492 | - | 1242 | WP_004861912.1 | sensor domain-containing diguanylate cyclase | - |
| H7R88_RS12815 () | 2731721..2732827 | - | 1107 | WP_004861907.1 | DUF4056 domain-containing protein | - |
| H7R88_RS12820 () | 2732881..2733840 | - | 960 | WP_015584341.1 | hypothetical protein | - |
| H7R88_RS12825 () | 2733858..2734985 | - | 1128 | WP_004861901.1 | BamA/TamA family outer membrane protein | - |
| H7R88_RS12830 () | 2735446..2736138 | + | 693 | WP_004861896.1 | TenA family protein | - |
| H7R88_RS12835 () | 2736135..2736863 | + | 729 | WP_044346646.1 | Aliphatic sulfonates import ATP-binding protein SsuB | VF |
| H7R88_RS12840 () | 2736860..2737600 | + | 741 | WP_004861892.1 | ABC transporter permease | - |
| H7R88_RS12845 () | 2737610..2738545 | + | 936 | WP_004861888.1 | ABC transporter substrate-binding protein | - |
| H7R88_RS12850 () | 2738852..2740237 | + | 1386 | WP_015584344.1 | Diaminobutyrate--2-oxoglutarate aminotransferase | VF |
| H7R88_RS12855 () | 2740247..2741728 | + | 1482 | WP_160873090.1 | aspartate aminotransferase family protein | - |
| H7R88_RS12860 () | 2741953..2743143 | - | 1191 | WP_088883972.1 | redoxin domain-containing protein | - |
| H7R88_RS12865 () | 2743228..2744589 | - | 1362 | WP_032717441.1 | HAMP domain-containing protein | - |
| H7R88_RS12870 () | 2744586..2745326 | - | 741 | WP_015584348.1 | Transcriptional regulatory protein OmpR | VF |
| H7R88_RS12875 () | 2745411..2746403 | - | 993 | WP_004861870.1 | alpha/beta hydrolase | - |
| H7R88_RS12880 () | 2746588..2747328 | - | 741 | WP_015584350.1 | glutamine amidotransferase | - |
| H7R88_RS12885 () | 2747487..2748473 | - | 987 | WP_004861863.1 | hypothetical protein | - |
| H7R88_RS12890 () | 2748489..2749340 | - | 852 | WP_004861860.1 | hypothetical protein | - |
| H7R88_RS12895 () | 2749509..2750906 | + | 1398 | WP_113991093.1 | FAD-binding oxidoreductase | - |
| H7R88_RS12900 () | 2750931..2752274 | + | 1344 | WP_015584351.1 | carbohydrate kinase | - |
| H7R88_RS12905 () | 2752271..2753236 | + | 966 | WP_015584352.1 | tagatose-6-phosphate kinase | - |
| H7R88_RS12910 () | 2753251..2754633 | + | 1383 | WP_183114177.1 | sugar porter family MFS transporter | - |
| H7R88_RS12915 () | 2754713..2755219 | + | 507 | WP_004861848.1 | D-ribose pyranase | - |
| H7R88_RS12920 () | 2755221..2756600 | + | 1380 | WP_004861845.1 | sugar porter family MFS transporter | - |
| H7R88_RS12925 () | 2756747..2758669 | - | 1923 | WP_183114178.1 | penicillin-binding protein 2 | - |
| H7R88_RS12930 () | 2758892..2760691 | - | 1800 | WP_183114179.1 | Allophanate hydrolase | VF |
| H7R88_RS12935 () | 2760688..2764293 | - | 3606 | WP_004861838.1 | urea carboxylase | - |
| H7R88_RS12940 () | 2764462..2765097 | - | 636 | WP_004861833.1 | urea carboxylase-associated family protein | - |
| H7R88_RS12945 () | 2765108..2765836 | - | 729 | WP_183114180.1 | urea carboxylase-associated family protein | - |
| H7R88_RS12950 () | 2765841..2766620 | - | 780 | WP_004861827.1 | Bicarbonate transport ATP-binding protein CmpD | VF |
| H7R88_RS12955 () | 2766617..2767432 | - | 816 | WP_004861825.1 | ABC transporter permease subunit | - |
| H7R88_RS12960 () | 2767457..2768515 | - | 1059 | WP_048023536.1 | putative urea ABC transporter substrate-binding protein | - |
| H7R88_RS12965 () | 2769237..2771414 | + | 2178 | WP_183114181.1 | Catalase-peroxidase | VF |
| H7R88_RS12970 () | 2771466..2772491 | - | 1026 | WP_183114182.1 | cell division protein ZapE | - |
| H7R88_RS12975 () | 2772865..2774988 | + | 2124 | WP_015584361.1 | TonB-dependent siderophore receptor | - |
| H7R88_RS12980 () | 2774997..2776019 | + | 1023 | WP_104895644.1 | ABC transporter substrate-binding protein | - |
| H7R88_RS12985 () | 2776239..2777648 | + | 1410 | WP_004861807.1 | MFS transporter | - |
| H7R88_RS12990 () | 2777784..2778665 | - | 882 | WP_004861802.1 | LysR family transcriptional regulator | - |
| H7R88_RS12995 () | 2778851..2779651 | + | 801 | WP_015584364.1 | Transcriptional activator NphR | VF |
| H7R88_RS13000 () | 2779735..2780355 | + | 621 | WP_015584365.1 | LysE family translocator | - |
| H7R88_RS13005 () | 2780402..2782702 | - | 2301 | WP_004861793.1 | FdhF/YdeP family oxidoreductase | - |
| H7R88_RS13010 () | 2782917..2783834 | - | 918 | WP_004861790.1 | hypothetical protein | - |
| H7R88_RS13015 () | 2784250..2785119 | - | 870 | WP_032717429.1 | DUF2236 domain-containing protein | - |
| H7R88_RS13020 () | 2785244..2785675 | - | 432 | WP_004861784.1 | OsmC family protein | - |
| H7R88_RS13025 () | 2786016..2787029 | + | 1014 | WP_015584367.1 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | - |
| H7R88_RS13030 () | 2787117..2788358 | + | 1242 | WP_086816643.1 | MFS transporter | - |
| H7R88_RS13035 () | 2788408..2789697 | + | 1290 | WP_183114183.1 | 5-methylphenazine-1-carboxylate 1-monooxygenase | VF |
| H7R88_RS13040 () | 2789743..2790789 | + | 1047 | WP_015584370.1 | amidohydrolase | - |
| H7R88_RS13045 () | 2790862..2791707 | - | 846 | WP_015584371.1 | DUF2218 domain-containing protein | - |
| H7R88_RS13050 () | 2791839..2792219 | - | 381 | WP_183114184.1 | RidA family protein | - |
| H7R88_RS13055 () | 2792287..2793591 | - | 1305 | WP_081213135.1 | hypothetical protein | - |
| H7R88_RS13060 () | 2793781..2795004 | - | 1224 | WP_183114185.1 | DUF3500 domain-containing protein | - |
| H7R88_RS13065 () | 2795004..2795873 | - | 870 | WP_015584375.1 | fumarylacetoacetate hydrolase family protein | - |
| H7R88_RS13070 () | 2795885..2796262 | - | 378 | WP_015584376.1 | nuclear transport factor 2 family protein | - |
| H7R88_RS13075 () | 2796259..2797041 | - | 783 | WP_015584377.1 | SDR family oxidoreductase | - |
| H7R88_RS13080 () | 2797290..2798174 | - | 885 | WP_004861781.1 | LysR family transcriptional regulator | - |
| H7R88_RS13085 () | 2798288..2799139 | + | 852 | WP_004861778.1 | MBL fold metallo-hydrolase | - |
| H7R88_RS13090 () | 2799297..2799437 | + | 141 | WP_004861775.1 | stationary-phase-induced ribosome-associated protein | - |
| H7R88_RS13095 () | 2799610..2801307 | + | 1698 | WP_004861771.1 | NAD-dependent malic enzyme | - |
| H7R88_RS13100 () | 2801647..2803359 | + | 1713 | WP_162661334.1 | putative ABC transporter ATP-binding protein YheS | VF |
| H7R88_RS13105 () | 2803425..2804402 | - | 978 | WP_183114186.1 | bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase | - |
| H7R88_RS13110 () | 2804604..2805203 | - | 600 | WP_004861761.1 | inorganic diphosphatase | - |
| H7R88_RS13115 () | 2805459..2806469 | + | 1011 | WP_004861757.1 | alcohol dehydrogenase AdhP | - |
| H7R88_RS13120 () | 2806675..2808297 | + | 1623 | WP_004861755.1 | TIGR04028 family ABC transporter substrate-binding protein | - |
| H7R88_RS13125 () | 2808308..2809252 | + | 945 | WP_004861753.1 | ABC transporter permease | - |
| H7R88_RS13130 () | 2809249..2810100 | + | 852 | WP_004861751.1 | ABC transporter permease | - |
| H7R88_RS13135 () | 2810097..2811701 | + | 1605 | WP_004861748.1 | Glutathione import ATP-binding protein GsiA | VF |
| H7R88_RS13140 () | 2811698..2812687 | + | 990 | WP_015584382.1 | putative FMN-dependent luciferase-like monooxygenase | - |
| H7R88_RS13145 () | 2812696..2813790 | + | 1095 | WP_183114187.1 | alkylhydroperoxidase domain protein | - |
| H7R88_RS13150 () | 2813787..2814956 | - | 1170 | WP_004861738.1 | MFS transporter AraJ | - |
| H7R88_RS13155 () | 2815174..2815506 | - | 333 | WP_004861735.1 | hypothetical protein | - |
| H7R88_RS13160 () | 2815807..2816625 | + | 819 | WP_004861730.1 | polyphosphate kinase 2 | - |
| H7R88_RS13165 () | 2816785..2817216 | + | 432 | WP_044348267.1 | VOC family protein | - |
| H7R88_RS13170 () | 2817253..2817921 | - | 669 | WP_004861726.1 | formate dehydrogenase-N subunit gamma | - |
| H7R88_RS13175 () | 2817914..2818798 | - | 885 | WP_015584385.1 | formate dehydrogenase subunit beta | - |
| H7R88_RS13180 () | 2818810..2821857 | - | 3048 | WP_088883983.1 | formate dehydrogenase-N subunit alpha | - |
| H7R88_RS13185 () | 2822081..2822959 | + | 879 | WP_004861717.1 | aromatic amino acid DMT transporter YddG | - |
| H7R88_RS13190 () | 2822956..2823729 | - | 774 | WP_004861716.1 | Levodione reductase | VF |
| H7R88_RS13195 () | 2823739..2824752 | - | 1014 | WP_048023517.1 | ring-hydroxylating dioxygenase ferredoxin reductase family protein | - |
| H7R88_RS13200 () | 2824762..2825247 | - | 486 | WP_004861712.1 | benzoate 1,2-dioxygenase small subunit | - |
| H7R88_RS13205 () | 2825247..2826629 | - | 1383 | WP_048023515.1 | Rieske 2Fe-2S domain-containing protein | - |
| H7R88_RS13210 () | 2826774..2827700 | - | 927 | WP_004861706.1 | catechol 1,2-dioxygenase | - |
| H7R88_RS13215 () | 2827778..2828068 | - | 291 | WP_004861704.1 | muconolactone Delta-isomerase | - |
| H7R88_RS13220 () | 2828088..2829206 | - | 1119 | WP_004861702.1 | muconate cycloisomerase family protein | - |
| H7R88_RS13225 () | 2829466..2830263 | + | 798 | WP_015584389.1 | helix-turn-helix domain-containing protein | - |
| H7R88_RS13230 () | 2830266..2831756 | - | 1491 | WP_064359366.1 | MFS transporter | - |
| H7R88_RS13235 () | 2831875..2832465 | + | 591 | WP_032717407.1 | TetR family transcriptional regulator | - |
| H7R88_RS13240 () | 2832742..2834130 | + | 1389 | WP_004861692.1 | NarK family nitrate/nitrite MFS transporter | - |
| H7R88_RS13245 () | 2834268..2838008 | + | 3741 | WP_071359390.1 | nitrate reductase subunit alpha | - |
| H7R88_RS13250 () | 2838005..2839531 | + | 1527 | WP_183114188.1 | nitrate reductase subunit beta | - |
| H7R88_RS13255 () | 2839531..2840226 | + | 696 | WP_004861686.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| H7R88_RS13260 () | 2840223..2840903 | + | 681 | WP_004861681.1 | respiratory nitrate reductase subunit gamma | - |
| H7R88_RS13265 () | 2841096..2841368 | + | 273 | WP_032717404.1 | hypothetical protein | - |
| H7R88_RS13270 () | 2841414..2842322 | - | 909 | WP_183114650.1 | HTH-type transcriptional regulator CysL | VF |
| H7R88_RS13275 () | 2842428..2842742 | + | 315 | WP_004861674.1 | carboxymuconolactone decarboxylase family protein | - |
| H7R88_RS13280 () | 2842753..2843163 | + | 411 | WP_015584395.1 | tautomerase family protein | - |
| H7R88_RS13285 () | 2843618..2844463 | - | 846 | WP_004861668.1 | N-hydroxyarylamine O-acetyltransferase | - |
| H7R88_RS13290 () | 2844540..2846195 | - | 1656 | WP_004861666.1 | iron ABC transporter permease | - |
| H7R88_RS13295 () | 2846265..2847233 | - | 969 | WP_004861664.1 | ABC transporter substrate-binding protein | - |
| H7R88_RS13300 () | 2847230..2847934 | - | 705 | WP_162098180.1 | Maltose/maltodextrin import ATP-binding protein MalK | VF |
| H7R88_RS13305 () | 2848146..2848727 | + | 582 | WP_004861659.1 | flavin reductase family protein | - |
| H7R88_RS13310 () | 2849349..2849858 | + | 510 | WP_004861657.1 | MarR family transcriptional regulator | - |
| H7R88_RS13315 () | 2849848..2850624 | + | 777 | WP_044351473.1 | DNA alkylation repair protein | - |
| H7R88_RS13320 () | 2850747..2851265 | + | 519 | WP_183114189.1 | hypothetical protein | VF |
| H7R88_RS13325 () | 2851274..2852095 | - | 822 | WP_064359372.1 | helix-turn-helix domain-containing protein | - |
| H7R88_RS13330 () | 2852301..2853872 | + | 1572 | WP_044351475.1 | family 78 glycoside hydrolase catalytic domain | - |
| H7R88_RS13335 () | 2853898..2855280 | + | 1383 | WP_128318675.1 | glycoside-pentoside-hexuronide (GPH):cation symporter | - |
| H7R88_RS13340 () | 2855325..2856929 | + | 1605 | WP_183114190.1 | carbohydrate porin | - |
| H7R88_RS13345 () | 2857138..2857365 | - | 228 | WP_004861642.1 | tautomerase PptA | - |
| H7R88_RS13350 () | 2857433..2858050 | - | 618 | WP_004861641.1 | glutathione S-transferase | - |
| H7R88_RS13355 () | 2858266..2858922 | - | 657 | WP_048023505.1 | hypothetical protein | - |
| H7R88_RS13360 () | 2859247..2860140 | - | 894 | WP_064357085.1 | transporter substrate-binding domain-containing protein | - |
| H7R88_RS13365 () | 2860137..2860913 | - | 777 | WP_004861634.1 | amino acid ABC transporter ATP-binding protein | - |
| H7R88_RS13370 () | 2860897..2861826 | - | 930 | WP_004861632.1 | amino acid ABC transporter permease | - |
| H7R88_RS13375 () | 2861836..2862345 | - | 510 | WP_004861630.1 | GNAT family N-acetyltransferase | - |
| H7R88_RS13380 () | 2862357..2864624 | - | 2268 | Protein_2620 | NtaA/DmoA family FMN-dependent monooxygenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|