MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_AP022245 Location: 4219046..4228397 Organism: Escherichia coli strain WP8-S18-CRE-02 Replicon: chromosome
Accession: NZ_AP022245 Location: 4219046..4228397 Organism: Escherichia coli strain WP8-S18-CRE-02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R30_RS20635 () | 4214207..4215508 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| H7R30_RS20640 () | 4215624..4215962 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| H7R30_RS20645 () | 4215938..4217635 | + | 1698 | WP_063073651.1 | protein-disulfide reductase DsbD | - |
| H7R30_RS20650 () | 4217672..4218247 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| H7R30_RS20660 () | 4219046..4220584 | + | 1539 | WP_001751945.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| H7R30_RS20665 () | 4220950..4222284 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| H7R30_RS20670 () | 4222364..4224511 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| H7R30_RS20675 () | 4224570..4226027 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| H7R30_RS20680 () | 4226264..4227781 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| H7R30_RS20685 () | 4227900..4228073 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| H7R30_RS20690 () | 4228101..4228397 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| H7R30_RS20695 () | 4228624..4228896 | - | 273 | WP_000405651.1 | N-acetyltransferase | - |
| H7R30_RS20700 () | 4228908..4229138 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| H7R30_RS20705 () | 4229319..4230950 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| H7R30_RS20710 () | 4230947..4231666 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.004 |