MGE detailed information
MGE type: Conjugative plasmid MGE length: 87171 bp
Accession: NZ_AP022224 Location: 1..87171 Organism: Escherichia coli strain WP8-S17-ESBL-12 Replicon: plasmid pWP8-S17-ESBL-12_2
Accession: NZ_AP022224 Location: 1..87171 Organism: Escherichia coli strain WP8-S17-ESBL-12 Replicon: plasmid pWP8-S17-ESBL-12_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R20_RS24540 () | 101..1408 | + | 1308 | WP_021577249.1 | IncI1-type conjugal transfer protein TrbA | - |
| H7R20_RS24545 () | 1405..2529 | + | 1125 | WP_000152387.1 | DsbC family protein | - |
| H7R20_RS24550 () | 2510..4813 | + | 2304 | WP_000077664.1 | TraM recognition domain-containing protein | - |
| H7R20_RS24555 () | 5280..5510 | + | 231 | WP_071591569.1 | hypothetical protein | - |
| H7R20_RS24560 () | 5608..6039 | - | 432 | WP_001335086.1 | hypothetical protein | - |
| H7R20_RS24565 () | 6107..8818 | - | 2712 | WP_000991387.1 | Protein TraI | Relaxase |
| H7R20_RS24570 () | 8830..9162 | - | 333 | WP_001291058.1 | hypothetical protein | - |
| H7R20_RS24575 () | 9395..9730 | + | 336 | WP_000157090.1 | hypothetical protein | - |
| H7R20_RS24580 () | 9816..10664 | - | 849 | WP_182924579.1 | DUF4942 domain-containing protein | - |
| H7R20_RS24585 () | 11012..11209 | + | 198 | WP_024189120.1 | hypothetical protein | - |
| H7R20_RS24590 () | 11243..11494 | + | 252 | WP_000148280.1 | helix-turn-helix domain-containing protein | - |
| H7R20_RS24595 () | 11525..11770 | - | 246 | WP_001260884.1 | hypothetical protein | - |
| H7R20_RS24600 () | 11770..12684 | - | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| H7R20_RS24605 () | 12681..13070 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| H7R20_RS24610 () | 13247..13513 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| H7R20_RS24615 () | 13606..14040 | - | 435 | WP_000218862.1 | hypothetical protein | - |
| H7R20_RS24620 () | 14773..15273 | - | 501 | WP_000117632.1 | antirestriction protein ArdA | - |
| H7R20_RS24625 () | 15735..16331 | - | 597 | WP_182924580.1 | hypothetical protein | - |
| H7R20_RS24630 () | 16328..17047 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| H7R20_RS24635 () | 17044..17478 | - | 435 | WP_024189119.1 | conjugation system SOS inhibitor PsiB | - |
| H7R20_RS24640 () | 17533..19491 | - | 1959 | WP_001401579.1 | ParB/RepB/Spo0J family partition protein | - |
| H7R20_RS24645 () | 19550..19783 | - | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| H7R20_RS24650 () | 19841..20368 | - | 528 | WP_021532391.1 | single-stranded DNA-binding protein | - |
| H7R20_RS24655 () | 20752..21066 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| H7R20_RS24660 () | 21137..21328 | - | 192 | WP_001024838.1 | hypothetical protein | - |
| H7R20_RS24665 () | 21325..21747 | - | 423 | WP_000271732.1 | DUF1380 family protein | - |
| H7R20_RS24670 () | 21794..22096 | - | 303 | WP_072105978.1 | antirestriction protein | - |
| H7R20_RS24675 () | 22634..23404 | - | 771 | WP_001006204.1 | hypothetical protein | - |
| H7R20_RS24680 () | 23449..23883 | - | 435 | WP_000274421.1 | DUF1380 family protein | - |
| H7R20_RS24685 () | 23897..24118 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| H7R20_RS24690 () | 24119..24802 | - | 684 | WP_000086137.1 | DNA methylase | - |
| H7R20_RS24695 () | 24878..25190 | - | 313 | Protein_31 | hypothetical protein | - |
| H7R20_RS24700 () | 25187..26089 | - | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| H7R20_RS24705 () | 26508..26756 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| H7R20_RS24710 () | 26753..27190 | + | 438 | WP_182924581.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H7R20_RS24715 () | 27190..28461 | + | 1272 | WP_021516924.1 | Y-family DNA polymerase | - |
| H7R20_RS24720 () | 28673..29299 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| H7R20_RS24725 () | 29296..29598 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| H7R20_RS24730 () | 30141..31487 | - | 1347 | WP_001132022.1 | hypothetical protein | - |
| H7R20_RS24735 () | 31841..32443 | + | 603 | WP_000517694.1 | hypothetical protein | - |
| H7R20_RS24740 () | 32581..32847 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| H7R20_RS24745 () | 33038..33319 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| H7R20_RS24750 () | 33425..33700 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H7R20_RS24755 () | 33700..33984 | - | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| H7R20_RS24760 () | 34887..35759 | - | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| H7R20_RS24765 () | 36462..37103 | + | 642 | WP_021515453.1 | hypothetical protein | - |
| H7R20_RS24770 () | 37243..37905 | + | 663 | WP_005082527.1 | hypothetical protein | - |
| H7R20_RS24775 () | 38172..38315 | + | 144 | WP_000176500.1 | hypothetical protein | - |
| H7R20_RS24780 () | 38396..38638 | + | 243 | WP_021515452.1 | PilI type IV pilus biogenesis protein | - |
| H7R20_RS24785 () | 38754..39074 | + | 321 | WP_001447108.1 | hypothetical protein | - |
| H7R20_RS24790 () | 39315..40385 | + | 1071 | WP_000730430.1 | hypothetical protein | VF |
| H7R20_RS24795 () | 40389..40826 | + | 438 | WP_000539952.1 | hypothetical protein | VF |
| H7R20_RS24800 () | 40858..42477 | + | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| H7R20_RS24805 () | 42498..43793 | + | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| H7R20_RS24810 () | 43783..44241 | + | 459 | WP_000095886.1 | hypothetical protein | VF |
| H7R20_RS24815 () | 44345..45853 | + | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H7R20_RS24820 () | 45855..46949 | + | 1095 | WP_032253914.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H7R20_RS24825 () | 47011..47547 | + | 537 | WP_000111521.1 | hypothetical protein | VF |
| H7R20_RS24830 () | 47592..48077 | + | 486 | WP_001080767.1 | hypothetical protein | VF |
| H7R20_RS24835 () | 48093..48719 | + | 627 | WP_013307883.1 | prepilin peptidase | - |
| H7R20_RS24840 () | 48737..50098 | + | 1362 | WP_021532399.1 | hypothetical protein | VF |
| H7R20_RS24845 () | 50270..50449 | - | 180 | Protein_61 | hypothetical protein | - |
| H7R20_RS24850 () | 50736..51116 | - | 381 | WP_168220877.1 | pilus assembly protein | - |
| H7R20_RS24855 () | 51074..51271 | + | 198 | WP_001356717.1 | hypothetical protein | - |
| H7R20_RS24860 () | 51595..52719 | + | 1125 | WP_013307880.1 | site-specific integrase | - |
| H7R20_RS24865 () | 52932..53753 | + | 822 | WP_001681675.1 | hypothetical protein | - |
| H7R20_RS24870 () | 53855..55057 | + | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| H7R20_RS24875 () | 55161..55619 | + | 459 | WP_025750398.1 | DotD/TraH family lipoprotein | - |
| H7R20_RS24880 () | 55616..56452 | + | 837 | WP_000745049.1 | hypothetical protein | VF |
| H7R20_RS24885 () | 56436..57584 | + | 1149 | WP_013307876.1 | putative protein YggR | VF |
| H7R20_RS24890 () | 57581..57871 | + | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| H7R20_RS24895 () | 58283..59545 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| H7R20_RS24900 () | 59795..60670 | + | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| H7R20_RS24905 () | 60705..61160 | + | 456 | Protein_73 | IS5 family transposase | - |
| H7R20_RS24910 () | 61168..61749 | + | 582 | WP_025750394.1 | hypothetical protein | - |
| H7R20_RS24915 () | 62103..66164 | + | 4062 | WP_013307874.1 | DNA primase | - |
| H7R20_RS24920 () | 66181..66531 | + | 351 | WP_001056367.1 | hypothetical protein | - |
| H7R20_RS24925 () | 66543..67238 | + | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| H7R20_RS24930 () | 67249..68223 | + | 975 | WP_000547383.1 | hypothetical protein | VF |
| H7R20_RS24935 () | 68227..69564 | + | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| H7R20_RS24940 () | 69561..70274 | + | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| H7R20_RS24945 () | 70274..70801 | + | 528 | WP_001407937.1 | conjugal transfer protein TraQ | - |
| H7R20_RS24950 () | 70848..71246 | + | 399 | WP_000088813.1 | hypothetical protein | - |
| H7R20_RS24955 () | 71303..71554 | + | 252 | WP_001277573.1 | hypothetical protein | - |
| H7R20_RS24960 () | 71469..72287 | + | 819 | WP_000753550.1 | hypothetical protein | - |
| H7R20_RS24965 () | 72582..75626 | + | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| H7R20_RS24970 () | 75626..76246 | + | 621 | WP_000286854.1 | hypothetical protein | - |
| H7R20_RS24975 () | 76204..77409 | + | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| H7R20_RS24980 () | 77406..77975 | + | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| H7R20_RS24985 () | 78050..80209 | + | 2160 | WP_000691811.1 | DotA/TraY family protein | - |
| H7R20_RS24990 () | 80297..80944 | + | 648 | WP_015056434.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H7R20_RS24995 () | 81218..82804 | + | 1587 | WP_000004564.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| H7R20_RS25000 () | 82942..83094 | - | 153 | WP_001335079.1 | Hok/Gef family protein | - |
| H7R20_RS25005 () | 83424..83666 | + | 243 | WP_000650923.1 | hypothetical protein | - |
| H7R20_RS25010 () | 83957..84325 | + | 369 | WP_001345852.1 | hypothetical protein | - |
| H7R20_RS25015 () | 84329..84544 | + | 216 | WP_000266543.1 | hypothetical protein | - |
| H7R20_RS25020 () | 84742..85365 | - | 624 | WP_001155247.1 | DNA-binding protein | - |
| H7R20_RS25025 () | 85524..85991 | + | 468 | WP_000598962.1 | thermonuclease family protein | - |
| H7R20_RS25030 () | 86141..86317 | + | 177 | WP_001054907.1 | hypothetical protein | - |
| H7R20_RS25035 () | 86380..86631 | - | 252 | WP_001081067.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|