MGE detailed information
MGE type: Conjugative plasmid MGE length: 84553 bp
Accession: NZ_AP022071 Location: 1..84553 Organism: Escherichia coli strain WP4-W18-ESBL-09 Replicon: plasmid pWP4-W18-ESBL-09_2
Accession: NZ_AP022071 Location: 1..84553 Organism: Escherichia coli strain WP4-W18-ESBL-09 Replicon: plasmid pWP4-W18-ESBL-09_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R28_RS25895 () | 101..277 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| H7R28_RS25900 () | 427..894 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| H7R28_RS25905 () | 1053..1676 | + | 624 | WP_001155247.1 | DNA-binding protein | - |
| H7R28_RS25910 () | 1874..2089 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| H7R28_RS25915 () | 2093..2461 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| H7R28_RS25920 () | 2752..2994 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| H7R28_RS25925 () | 3324..3476 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| H7R28_RS25930 () | 3614..5200 | - | 1587 | WP_000004564.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| H7R28_RS25935 () | 5474..6127 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H7R28_RS25940 () | 6215..8380 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| H7R28_RS25945 () | 8455..9024 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| H7R28_RS25950 () | 9021..10226 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| H7R28_RS25955 () | 10184..10804 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| H7R28_RS25960 () | 10804..13848 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| H7R28_RS25965 () | 14143..14961 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| H7R28_RS25970 () | 14876..15127 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| H7R28_RS25975 () | 15184..15582 | - | 399 | WP_000088812.1 | hypothetical protein | - |
| H7R28_RS25980 () | 15629..16156 | - | 528 | WP_001407937.1 | conjugal transfer protein TraQ | - |
| H7R28_RS25985 () | 16156..16869 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| H7R28_RS25990 () | 16866..18203 | - | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| H7R28_RS25995 () | 18207..19181 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| H7R28_RS26000 () | 19192..19887 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| H7R28_RS26005 () | 19899..20249 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| H7R28_RS26010 () | 20266..24327 | - | 4062 | WP_149856870.1 | DNA primase | - |
| H7R28_RS26015 () | 24681..25262 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| H7R28_RS26020 () | 25494..25784 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| H7R28_RS26025 () | 25781..26929 | - | 1149 | WP_013307876.1 | putative protein YggR | VF |
| H7R28_RS26030 () | 26913..27749 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| H7R28_RS26035 () | 27746..28204 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| H7R28_RS26040 () | 28308..29510 | - | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| H7R28_RS26045 () | 29612..30433 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| H7R28_RS26050 () | 30646..31770 | - | 1125 | WP_013307880.1 | site-specific integrase | - |
| H7R28_RS26055 () | 31945..32184 | + | 240 | WP_000271302.1 | hypothetical protein | - |
| H7R28_RS26060 () | 32189..32566 | - | 378 | WP_052972533.1 | phage tail protein | - |
| H7R28_RS26065 () | 32861..33241 | - | 381 | WP_166739623.1 | pilus assembly protein | - |
| H7R28_RS26070 () | 33199..33396 | + | 198 | WP_001356717.1 | hypothetical protein | - |
| H7R28_RS26075 () | 33393..34628 | - | 1236 | WP_032151497.1 | hypothetical protein | VF |
| H7R28_RS26080 () | 34646..35272 | - | 627 | WP_013307883.1 | prepilin peptidase | - |
| H7R28_RS26085 () | 35288..35773 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| H7R28_RS26090 () | 35818..36354 | - | 537 | WP_000111521.1 | hypothetical protein | VF |
| H7R28_RS26095 () | 36416..37510 | - | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H7R28_RS26100 () | 37512..39020 | - | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H7R28_RS26105 () | 39123..39581 | - | 459 | WP_000095887.1 | hypothetical protein | VF |
| H7R28_RS26110 () | 39571..40866 | - | 1296 | WP_000129885.1 | type 4b pilus protein PilO2 | - |
| H7R28_RS26115 () | 40887..42506 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| H7R28_RS26120 () | 42538..42975 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| H7R28_RS26125 () | 42979..44049 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
| H7R28_RS26130 () | 44276..44611 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| H7R28_RS26135 () | 44727..44969 | - | 243 | WP_021515452.1 | PilI type IV pilus biogenesis protein | - |
| H7R28_RS26140 () | 45050..45193 | - | 144 | WP_000176500.1 | hypothetical protein | - |
| H7R28_RS26145 () | 45460..46122 | - | 663 | WP_005082527.1 | hypothetical protein | - |
| H7R28_RS26150 () | 46262..46903 | - | 642 | WP_021515453.1 | hypothetical protein | - |
| H7R28_RS26155 () | 47606..48478 | + | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| H7R28_RS26160 () | 49173..49331 | + | 159 | WP_000829588.1 | hypothetical protein | - |
| H7R28_RS26165 () | 49386..49655 | + | 270 | WP_000079932.1 | hypothetical protein | Antitoxin Detail |
| H7R28_RS26170 () | 49652..49933 | + | 282 | WP_000969997.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H7R28_RS26175 () | 50770..51357 | + | 588 | WP_001418189.1 | serine acetyltransferase | - |
| H7R28_RS26180 () | 51639..52232 | - | 594 | WP_001401779.1 | hypothetical protein | - |
| H7R28_RS26185 () | 52586..53932 | + | 1347 | WP_001132021.1 | hypothetical protein | - |
| H7R28_RS26190 () | 54264..54968 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| H7R28_RS26195 () | 55287..55589 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| H7R28_RS26200 () | 55586..56212 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| H7R28_RS26205 () | 56408..57679 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| H7R28_RS26210 () | 57679..58116 | - | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H7R28_RS26215 () | 58113..58361 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| H7R28_RS26220 () | 58780..59682 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| H7R28_RS26225 () | 59679..59991 | + | 313 | Protein_67 | hypothetical protein | - |
| H7R28_RS26230 () | 60067..60750 | + | 684 | WP_001401756.1 | DNA methylase | - |
| H7R28_RS26235 () | 60751..60972 | + | 222 | WP_001104871.1 | hypothetical protein | - |
| H7R28_RS26240 () | 60866..61420 | + | 555 | WP_077635412.1 | DUF1380 family protein | - |
| H7R28_RS26245 () | 61464..62239 | + | 776 | Protein_71 | hypothetical protein | - |
| H7R28_RS26250 () | 62777..63079 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| H7R28_RS26255 () | 63126..63548 | + | 423 | WP_013307864.1 | DUF1380 family protein | - |
| H7R28_RS26260 () | 63545..63736 | + | 192 | WP_001703906.1 | hypothetical protein | - |
| H7R28_RS26265 () | 64069..64137 | - | 69 | Protein_75 | pilus protein | - |
| H7R28_RS26270 () | 64506..65033 | + | 528 | WP_001760699.1 | single-stranded DNA-binding protein | - |
| H7R28_RS26275 () | 65091..65324 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| H7R28_RS26280 () | 65383..67341 | + | 1959 | WP_064670764.1 | ParB/RepB/Spo0J family partition protein | - |
| H7R28_RS26285 () | 67396..67830 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| H7R28_RS26290 () | 67827..68546 | + | 720 | WP_001276268.1 | plasmid SOS inhibition protein A | - |
| H7R28_RS26295 () | 68543..69139 | + | 597 | WP_001401763.1 | hypothetical protein | - |
| H7R28_RS26300 () | 69601..70101 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| H7R28_RS26305 () | 70834..71268 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| H7R28_RS26310 () | 71361..71627 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| H7R28_RS26315 () | 71804..72193 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| H7R28_RS26320 () | 72190..73080 | + | 891 | WP_000038343.1 | Recombination-promoting nuclease RpnA | VF |
| H7R28_RS26325 () | 73080..73325 | + | 246 | WP_001260882.1 | hypothetical protein | - |
| H7R28_RS26330 () | 73356..73607 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| H7R28_RS26335 () | 73641..73838 | - | 198 | Protein_89 | hypothetical protein | - |
| H7R28_RS26340 () | 74187..75035 | + | 849 | WP_013307867.1 | DUF4942 domain-containing protein | - |
| H7R28_RS26345 () | 75121..75456 | - | 336 | WP_000157090.1 | hypothetical protein | - |
| H7R28_RS26350 () | 75687..76019 | + | 333 | WP_001291057.1 | hypothetical protein | - |
| H7R28_RS26355 () | 76031..78751 | + | 2721 | WP_000991405.1 | Protein TraI | Relaxase |
| H7R28_RS26360 () | 78972..81272 | - | 2301 | WP_013307869.1 | TraM recognition domain-containing protein | - |
| H7R28_RS26365 () | 81253..82377 | - | 1125 | WP_000152382.1 | DsbC family protein | - |
| H7R28_RS26370 () | 82374..83699 | - | 1326 | WP_181137976.1 | IncI1-type conjugal transfer protein TrbA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|