MGE detailed information
MGE type: Conjugative plasmid MGE length: 95805 bp
Accession: NZ_AP022066 Location: 1..95805 Organism: Escherichia coli strain WP4-W18-ESBL-08 Replicon: plasmid pWP4-W18-ESBL-08_2
Accession: NZ_AP022066 Location: 1..95805 Organism: Escherichia coli strain WP4-W18-ESBL-08 Replicon: plasmid pWP4-W18-ESBL-08_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R03_RS24685 () | 101..388 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| H7R03_RS24690 () | 830..1363 | + | 534 | WP_182913250.1 | transcription termination factor NusG | - |
| H7R03_RS24695 () | 1616..2299 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| H7R03_RS24700 () | 2472..3023 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| H7R03_RS24705 () | 3185..3439 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| H7R03_RS24710 () | 3482..3934 | + | 453 | WP_000008894.1 | hypothetical protein | - |
| H7R03_RS24715 () | 4608..5675 | + | 1068 | WP_001302629.1 | hypothetical protein | VF |
| H7R03_RS24720 () | 5675..6112 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| H7R03_RS24725 () | 6126..7808 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| H7R03_RS24730 () | 7801..9096 | + | 1296 | WP_021560540.1 | hypothetical protein | VF |
| H7R03_RS24735 () | 9083..9535 | + | 453 | WP_119002036.1 | hypothetical protein | VF |
| H7R03_RS24740 () | 9546..11099 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H7R03_RS24745 () | 11112..12209 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H7R03_RS24750 () | 12227..12841 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| H7R03_RS24755 () | 12851..13411 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| H7R03_RS24760 () | 13396..14052 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| H7R03_RS24765 () | 14052..15476 | + | 1425 | WP_001389385.1 | hypothetical protein | VF |
| H7R03_RS24770 () | 15473..15670 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| H7R03_RS24775 () | 16280..17434 | + | 1155 | WP_001139957.1 | integrase | - |
| H7R03_RS24780 () | 17585..18409 | + | 825 | WP_001238939.1 | hypothetical protein | - |
| H7R03_RS24785 () | 18494..19696 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| H7R03_RS24790 () | 19756..20340 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| H7R03_RS24795 () | 20735..21193 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| H7R03_RS24800 () | 21190..22008 | + | 819 | WP_000646098.1 | hypothetical protein | VF |
| H7R03_RS24805 () | 22005..23153 | + | 1149 | WP_182913251.1 | putative protein YggR | VF |
| H7R03_RS24810 () | 23150..23440 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| H7R03_RS24815 () | 23455..24006 | + | 552 | WP_000014583.1 | Phospholipase D | VF |
| H7R03_RS24820 () | 24095..27862 | + | 3768 | WP_001141527.1 | DNA primase | - |
| H7R03_RS24825 () | 27880..28227 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| H7R03_RS24830 () | 28224..28916 | + | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| H7R03_RS24835 () | 28927..29910 | + | 984 | WP_001191877.1 | hypothetical protein | VF |
| H7R03_RS24840 () | 29913..31202 | + | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| H7R03_RS24845 () | 31202..31906 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| H7R03_RS24850 () | 31906..32433 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| H7R03_RS24855 () | 32484..32888 | + | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| H7R03_RS24860 () | 32952..33140 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| H7R03_RS24865 () | 33124..33924 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| H7R03_RS24870 () | 34014..37058 | + | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| H7R03_RS24875 () | 37058..37672 | + | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| H7R03_RS24880 () | 37639..38841 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| H7R03_RS24885 () | 38870..39454 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| H7R03_RS24890 () | 39551..41719 | + | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| H7R03_RS24895 () | 41793..42443 | + | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H7R03_RS24900 () | 42515..42724 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| H7R03_RS24905 () | 43116..43292 | + | 177 | WP_001054904.1 | hypothetical protein | - |
| H7R03_RS24910 () | 43951..44202 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| H7R03_RS24915 () | 44274..44426 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - () | 44476..44538 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 44476..44538 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 44476..44538 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 44476..44538 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| H7R03_RS24920 () | 44718..45926 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| H7R03_RS24925 () | 45945..47015 | + | 1071 | WP_000151576.1 | IncI1-type conjugal transfer protein TrbB | - |
| H7R03_RS24930 () | 47008..49299 | + | 2292 | WP_001289270.1 | hypothetical protein | - |
| H7R03_RS24935 () | 50084..50719 | + | 636 | WP_000999378.1 | CPBP family intramembrane metalloprotease | - |
| H7R03_RS24940 () | 50822..52075 | + | 1254 | WP_001685252.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| H7R03_RS24945 () | 52075..54264 | + | 2190 | WP_000443942.1 | peptidase domain-containing ABC transporter | - |
| H7R03_RS24950 () | 54314..54886 | - | 573 | WP_000332079.1 | hypothetical protein | - |
| H7R03_RS24955 () | 54912..57611 | - | 2700 | WP_039005629.1 | Protein TraI | Relaxase |
| H7R03_RS24960 () | 57622..57954 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| H7R03_RS24965 () | 58188..58523 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H7R03_RS24970 () | 58607..59455 | - | 849 | WP_182913247.1 | DUF4942 domain-containing protein | - |
| H7R03_RS24975 () | 59804..60001 | + | 198 | Protein_58 | hypothetical protein | - |
| H7R03_RS24980 () | 60035..60286 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| H7R03_RS24985 () | 60317..60511 | - | 195 | WP_001681710.1 | hypothetical protein | - |
| H7R03_RS24990 () | 60573..61463 | - | 891 | WP_001542500.1 | Recombination-promoting nuclease RpnA | VF |
| H7R03_RS24995 () | 61528..61794 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| H7R03_RS25000 () | 61888..62322 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| H7R03_RS25005 () | 63051..63551 | - | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| H7R03_RS25010 () | 63999..65174 | - | 1176 | WP_023210867.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| H7R03_RS25015 () | 65304..66023 | - | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| H7R03_RS25020 () | 66020..66454 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| H7R03_RS25025 () | 66509..68467 | - | 1959 | WP_182913248.1 | ParB/RepB/Spo0J family partition protein | - |
| H7R03_RS25030 () | 68526..68759 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| H7R03_RS25035 () | 68817..69344 | - | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| H7R03_RS25040 () | 69713..69781 | + | 69 | Protein_71 | pilus protein | - |
| H7R03_RS25045 () | 70114..70305 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| H7R03_RS25050 () | 70302..70724 | - | 423 | WP_021560529.1 | DUF1380 family protein | - |
| H7R03_RS25055 () | 70771..71073 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| H7R03_RS25060 () | 71614..72384 | - | 771 | WP_001006206.1 | hypothetical protein | - |
| H7R03_RS25065 () | 72429..72863 | - | 435 | WP_000274499.1 | DUF1380 family protein | - |
| H7R03_RS25070 () | 72876..73097 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| H7R03_RS25075 () | 73098..73781 | - | 684 | WP_000086148.1 | DNA methylase | - |
| H7R03_RS25080 () | 73857..74168 | - | 312 | WP_032260789.1 | hypothetical protein | - |
| H7R03_RS25085 () | 74165..75067 | - | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| H7R03_RS25090 () | 75485..75733 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| H7R03_RS25095 () | 75730..76167 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H7R03_RS25100 () | 76167..77441 | + | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| H7R03_RS25105 () | 77443..77859 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| H7R03_RS25110 () | 77852..78832 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| H7R03_RS25115 () | 79246..79554 | - | 309 | WP_000048808.1 | hypothetical protein | - |
| H7R03_RS25120 () | 79641..80285 | - | 645 | WP_001144036.1 | ParA family protein | - |
| H7R03_RS25125 () | 80464..81243 | - | 780 | WP_000147280.1 | site-specific integrase | - |
| H7R03_RS25130 () | 81243..82064 | - | 822 | WP_001316850.1 | hypothetical protein | - |
| H7R03_RS25135 () | 82123..82473 | - | 351 | WP_000493380.1 | hypothetical protein | - |
| H7R03_RS25140 () | 83004..83930 | + | 927 | WP_001280608.1 | hypothetical protein | - |
| H7R03_RS25145 () | 83974..84228 | + | 255 | WP_000678529.1 | hypothetical protein | - |
| H7R03_RS25150 () | 84725..85069 | + | 345 | WP_000793772.1 | hypothetical protein | - |
| H7R03_RS25155 () | 85100..85240 | + | 141 | WP_154071810.1 | hypothetical protein | - |
| H7R03_RS25160 () | 85253..86254 | - | 1002 | WP_000138754.1 | DUF4238 domain-containing protein | - |
| H7R03_RS25165 () | 86658..88451 | + | 1794 | WP_182913249.1 | DUF262 domain-containing protein | - |
| H7R03_RS25170 () | 88742..88993 | + | 252 | WP_021560533.1 | hypothetical protein | - |
| H7R03_RS25175 () | 88993..89583 | + | 591 | WP_021560534.1 | hypothetical protein | - |
| H7R03_RS25180 () | 89795..90847 | + | 1053 | WP_000655519.1 | hypothetical protein | - |
| H7R03_RS25185 () | 91023..91625 | + | 603 | WP_021560535.1 | hypothetical protein | - |
| H7R03_RS25190 () | 91681..92181 | + | 501 | WP_024230392.1 | hypothetical protein | - |
| H7R03_RS25195 () | 92256..92531 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H7R03_RS25200 () | 92531..92815 | - | 285 | WP_024186511.1 | ribbon-helix-helix domain-containing protein | - |
| H7R03_RS25205 () | 93721..94752 | - | 1032 | WP_000907863.1 | replication initiation protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|