MGE detailed information
MGE type: Genomic_island MGE length: 20013 bp
Accession: NZ_AP022036 Location: 3997172..4017184 Organism: Escherichia coli strain WP3-S18-ESBL-09 Replicon: chromosome
Accession: NZ_AP022036 Location: 3997172..4017184 Organism: Escherichia coli strain WP3-S18-ESBL-09 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R01_RS19110 () | 3992491..3993393 | - | 903 | WP_000832231.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| H7R01_RS19115 () | 3993413..3993916 | - | 504 | WP_000872005.1 | type 1 fimbria minor subunit FimG | - |
| H7R01_RS19120 () | 3993929..3994459 | - | 531 | WP_001439327.1 | type 1 fimbria minor subunit FimF | - |
| H7R01_RS19125 () | 3994469..3997105 | - | 2637 | WP_000120935.1 | fimbrial usher FimD | - |
| H7R01_RS19130 () | 3997172..3997897 | - | 726 | WP_000066570.1 | Chaperone protein FimC | VF |
| H7R01_RS19135 () | 3997934..3998473 | - | 540 | WP_000824112.1 | putative major fimbrial subunit LpfA | VF |
| H7R01_RS19140 () | 3998538..3999086 | - | 549 | WP_000695572.1 | Type-1 fimbrial protein, A chain | VF |
| H7R01_RS19145 () | 3999567..4000163 | - | 597 | WP_000044707.1 | Tyrosine recombinase XerD | VF |
| H7R01_RS19150 () | 4000641..4001243 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| H7R01_RS19155 () | 4002695..4003411 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| H7R01_RS19160 () | 4003430..4004536 | + | 1107 | WP_001044124.1 | N-acetylneuraminate epimerase | - |
| H7R01_RS19165 () | 4004601..4005581 | + | 981 | WP_001765419.1 | sialate O-acetylesterase | - |
| H7R01_RS19170 () | 4006164..4007390 | - | 1227 | Protein_3746 | DNA helicase | - |
| H7R01_RS19175 () | 4007468..4007767 | + | 300 | WP_024186563.1 | GNAT family N-acetyltransferase | - |
| H7R01_RS19180 () | 4008144..4008401 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| H7R01_RS19185 () | 4008413..4008964 | + | 552 | WP_000215866.1 | N-acetyltransferase | Antitoxin Detail |
| H7R01_RS19190 () | 4009016..4009762 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| H7R01_RS19195 () | 4009889..4010149 | + | 261 | WP_000084876.1 | hypothetical protein | - |
| H7R01_RS23255 () | 4010187..4010303 | + | 117 | Protein_3752 | VOC family protein | - |
| H7R01_RS19200 () | 4010548..4011669 | + | 1122 | WP_000010835.1 | M42 family metallopeptidase | - |
| H7R01_RS19205 () | 4011666..4011944 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| H7R01_RS19210 () | 4011956..4013269 | + | 1314 | WP_000460846.1 | galactitol-specific PTS transporter subunit IIC | - |
| H7R01_RS19215 () | 4013282..4014088 | + | 807 | WP_000118623.1 | BtpA family protein SgcQ | - |
| H7R01_RS19220 () | 4014219..4014650 | + | 432 | WP_000606405.1 | PTS sugar transporter subunit IIA | - |
| H7R01_RS19225 () | 4014662..4015294 | + | 633 | WP_000600625.1 | ribulose-phosphate 3 epimerase family protein | - |
| H7R01_RS19230 () | 4015311..4016093 | + | 783 | WP_000082779.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| H7R01_RS19235 () | 4016396..4017184 | + | 789 | WP_019843006.1 | IclR family transcriptional regulator | - |
| H7R01_RS19240 () | 4017189..4018094 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| H7R01_RS19245 () | 4018105..4020072 | + | 1968 | WP_000116327.1 | xylonate dehydratase YjhG | - |
| H7R01_RS19250 () | 4020179..4021528 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|