MGE detailed information
MGE type: Prophage MGE length: 61750 bp
Accession: NZ_AP021946 Location: 3818225..3879974 Organism: Escherichia coli strain WP2-S18-ESBL-08 Replicon: chromosome
Accession: NZ_AP021946 Location: 3818225..3879974 Organism: Escherichia coli strain WP2-S18-ESBL-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R07_RS18605 () | 3813752..3815950 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| H7R07_RS18610 () | 3815960..3816916 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| H7R07_RS18615 () | 3816967..3817305 | + | 339 | Protein_3647 | LysR family transcriptional regulator | - |
| H7R07_RS18620 () | 3818225..3819025 | + | 801 | WP_182913062.1 | AAA family ATPase | - |
| H7R07_RS18625 () | 3819063..3819461 | + | 399 | WP_001041461.1 | hypothetical protein | - |
| H7R07_RS18630 () | 3819461..3820126 | + | 666 | WP_000957441.1 | hypothetical protein | - |
| H7R07_RS18635 () | 3820164..3820647 | - | 484 | Protein_3651 | DUF4113 domain-containing protein | - |
| H7R07_RS18640 () | 3820829..3822057 | + | 1229 | WP_113708090.1 | IS3 family transposase IS2 | Transposase |
| H7R07_RS18645 () | 3822261..3823433 | + | 1173 | WP_000952428.1 | IS21 family transposase ISEc62 | Transposase |
| H7R07_RS18650 () | 3823433..3824227 | + | 795 | WP_000544809.1 | IS21 family transposase ISEc62 | Transposase |
| H7R07_RS18655 () | 3824522..3826411 | + | 1890 | WP_000834404.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| H7R07_RS18660 () | 3826839..3827009 | + | 171 | Protein_3656 | integrase | - |
| H7R07_RS18665 () | 3827014..3828045 | - | 1032 | WP_001185479.1 | hypothetical protein | - |
| H7R07_RS18670 () | 3831323..3831844 | - | 522 | Protein_3658 | prophage tail fiber N-terminal domain-containing protein | - |
| H7R07_RS18675 () | 3831903..3832502 | - | 600 | WP_001230375.1 | Attachment invasion locus protein | VF |
| H7R07_RS18680 () | 3832572..3835985 | - | 3414 | WP_182913063.1 | host specificity protein J | - |
| H7R07_RS18685 () | 3836046..3836648 | - | 603 | WP_122991788.1 | tail assembly protein | - |
| H7R07_RS18690 () | 3836585..3837328 | - | 744 | WP_061363449.1 | C40 family peptidase | - |
| H7R07_RS18695 () | 3837334..3838032 | - | 699 | WP_032271385.1 | phage minor tail protein L | - |
| H7R07_RS18700 () | 3838032..3838361 | - | 330 | WP_000847352.1 | phage tail protein | - |
| H7R07_RS18705 () | 3838358..3840919 | - | 2562 | WP_000840239.1 | phage tail tape measure protein | - |
| H7R07_RS18710 () | 3840912..3841346 | - | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| H7R07_RS18715 () | 3841328..3841750 | - | 423 | WP_000479155.1 | phage minor tail protein G | - |
| H7R07_RS18720 () | 3841766..3842506 | - | 741 | WP_001446995.1 | phage tail protein | - |
| H7R07_RS18725 () | 3842514..3842909 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| H7R07_RS18730 () | 3842906..3843484 | - | 579 | WP_000975085.1 | phage tail protein | - |
| H7R07_RS18735 () | 3843496..3843849 | - | 354 | WP_000753001.1 | head-tail joining protein | - |
| H7R07_RS18740 () | 3843861..3844256 | - | 396 | WP_000158886.1 | DNA-packaging protein FI | - |
| H7R07_RS18745 () | 3844298..3845323 | - | 1026 | WP_000063273.1 | major capsid protein | - |
| H7R07_RS18750 () | 3845379..3845711 | - | 333 | WP_001380322.1 | head decoration protein | - |
| H7R07_RS18755 () | 3845721..3847040 | - | 1320 | WP_000123280.1 | S49 family peptidase | - |
| H7R07_RS18760 () | 3847021..3848622 | - | 1602 | WP_001446996.1 | phage portal protein | - |
| H7R07_RS18765 () | 3848619..3848825 | - | 207 | WP_000198149.1 | gpW family protein | - |
| H7R07_RS18770 () | 3848822..3850747 | - | 1926 | WP_001027290.1 | phage terminase large subunit family protein | - |
| H7R07_RS18775 () | 3850722..3851267 | - | 546 | WP_000453576.1 | DNA-packaging protein | - |
| H7R07_RS18780 () | 3851656..3851889 | + | 234 | WP_001663509.1 | YlcI/YnfO family protein | - |
| H7R07_RS18785 () | 3851946..3852356 | + | 411 | WP_000079508.1 | DUF1398 family protein | - |
| H7R07_RS18790 () | 3852707..3852859 | - | 153 | WP_001139678.1 | hypothetical protein | - |
| H7R07_RS18795 () | 3852847..3853284 | - | 438 | WP_001446997.1 | lysis protein | - |
| H7R07_RS18800 () | 3853281..3853757 | - | 477 | WP_001197767.1 | glycoside hydrolase family protein | - |
| H7R07_RS18805 () | 3853761..3854096 | - | 336 | WP_001120502.1 | phage holin, lambda family | - |
| H7R07_RS18810 () | 3854173..3855225 | - | 1053 | WP_021548833.1 | site-specific DNA-methyltransferase | - |
| H7R07_RS18815 () | 3855376..3855579 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| H7R07_RS18820 () | 3855848..3856789 | + | 942 | WP_182913064.1 | hypothetical protein | - |
| H7R07_RS18825 () | 3856811..3857260 | + | 450 | WP_001208502.1 | hypothetical protein | - |
| H7R07_RS18830 () | 3857296..3857664 | - | 369 | WP_085949407.1 | antitermination protein Q | - |
| H7R07_RS18835 () | 3857679..3858668 | - | 990 | WP_001571227.1 | DUF968 domain-containing protein | - |
| H7R07_RS18840 () | 3858676..3859473 | - | 798 | WP_001061412.1 | KilA-N domain-containing protein | - |
| H7R07_RS18845 () | 3859493..3859882 | - | 390 | WP_061363473.1 | RusA family crossover junction endodeoxyribonuclease | - |
| H7R07_RS18850 () | 3859879..3860205 | - | 327 | WP_000210148.1 | LexA family transcriptional regulator | - |
| H7R07_RS18855 () | 3860205..3860699 | - | 495 | WP_001573323.1 | PerC family transcriptional regulator | - |
| H7R07_RS18860 () | 3860696..3861652 | - | 957 | WP_000104985.1 | helix-turn-helix domain-containing protein | - |
| H7R07_RS18865 () | 3861642..3861821 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| H7R07_RS18870 () | 3861997..3862548 | - | 552 | WP_000515847.1 | hypothetical protein | - |
| H7R07_RS18875 () | 3862586..3862786 | - | 201 | WP_000205494.1 | cell division protein | - |
| H7R07_RS18880 () | 3862884..3863510 | + | 627 | WP_000450738.1 | LexA family transcriptional regulator | - |
| H7R07_RS18885 () | 3863738..3864253 | - | 516 | WP_000559916.1 | hypothetical protein | - |
| H7R07_RS18890 () | 3864398..3864708 | + | 311 | Protein_3702 | hypothetical protein | - |
| H7R07_RS18895 () | 3864723..3865085 | + | 363 | WP_000135682.1 | hypothetical protein | - |
| H7R07_RS18900 () | 3865151..3865975 | + | 825 | WP_096058035.1 | DUF2303 family protein | - |
| H7R07_RS18905 () | 3866103..3866639 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| H7R07_RS18910 () | 3866630..3866992 | + | 363 | WP_001242749.1 | phage protein | - |
| H7R07_RS18915 () | 3866992..3867297 | + | 306 | WP_000206734.1 | hypothetical protein | - |
| H7R07_RS18920 () | 3867524..3868687 | + | 1164 | WP_000051887.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| H7R07_RS18930 () | 3868892..3870145 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| H7R07_RS18935 () | 3870157..3871260 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| H7R07_RS18940 () | 3871548..3872603 | + | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| H7R07_RS18945 () | 3872642..3873043 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| H7R07_RS18950 () | 3873101..3874345 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 3873761..3873841 | - | 81 | NuclAT_12 | - | - |
| - () | 3873761..3873841 | - | 81 | NuclAT_12 | - | - |
| - () | 3873761..3873841 | - | 81 | NuclAT_12 | - | - |
| - () | 3873761..3873841 | - | 81 | NuclAT_12 | - | - |
| H7R07_RS18955 () | 3874437..3874895 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| H7R07_RS18960 () | 3875156..3876613 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| H7R07_RS18965 () | 3876670..3877191 | - | 522 | Protein_3716 | peptide chain release factor H | - |
| H7R07_RS18970 () | 3877187..3877393 | - | 207 | Protein_3717 | RtcB family protein | - |
| H7R07_RS18975 () | 3877711..3878163 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| H7R07_RS18980 () | 3878173..3878571 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| H7R07_RS18985 () | 3878574..3878867 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| H7R07_RS18990 () | 3878919..3879974 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| H7R07_RS18995 () | 3880045..3880830 | - | 786 | WP_000207552.1 | putative lateral flagellar export/assembly protein LafU | - |
| H7R07_RS19000 () | 3880802..3882514 | + | 1713 | Protein_3723 | flagellar biosynthesis protein FlhA | - |
| H7R07_RS19005 () | 3882738..3883235 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| H7R07_RS19010 () | 3883411..3884160 | - | 750 | WP_133412475.1 | C40 family peptidase | - |
| H7R07_RS19015 () | 3884370..3884630 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| H7R07_RS19020 () | 3884633..3884911 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|