MGE detailed information
MGE type: Genomic_island MGE length: 16105 bp
Accession: NZ_AP021946 Location: 2533714..2549818 Organism: Escherichia coli strain WP2-S18-ESBL-08 Replicon: chromosome
Accession: NZ_AP021946 Location: 2533714..2549818 Organism: Escherichia coli strain WP2-S18-ESBL-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R07_RS12380 () | 2533714..2533980 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| H7R07_RS12385 () | 2533980..2535302 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| H7R07_RS12390 () | 2535633..2536861 | + | 1229 | WP_113708090.1 | IS3 family transposase IS2 | Transposase |
| H7R07_RS12395 () | 2537066..2538088 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| H7R07_RS12400 () | 2538088..2538867 | + | 780 | WP_001323403.1 | IS21 family transposase IS100kyp | Transposase |
| H7R07_RS12405 () | 2538933..2539117 | + | 185 | Protein_2436 | helix-turn-helix transcriptional regulator | - |
| H7R07_RS12410 () | 2539372..2540598 | + | 1227 | Protein_2437 | Outer membrane usher protein FimD | VF |
| H7R07_RS12415 () | 2540612..2541142 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| H7R07_RS12420 () | 2541155..2541658 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| H7R07_RS12425 () | 2541717..2542631 | + | 915 | WP_000520662.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| H7R07_RS12430 () | 2542965..2545244 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| H7R07_RS12435 () | 2545492..2545689 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| H7R07_RS12440 () | 2545764..2546525 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| H7R07_RS12445 () | 2546927..2548609 | + | 1683 | WP_001295684.1 | sulfatase | - |
| H7R07_RS12450 () | 2548661..2549818 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| H7R07_RS12455 () | 2549784..2549906 | - | 123 | WP_120795387.1 | protein YneP | - |
| H7R07_RS12460 () | 2550109..2551794 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| H7R07_RS12465 () | 2551832..2554204 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.009 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.009 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.009 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.009 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.009 |