MGE detailed information
MGE type: Genomic_island MGE length: 34370 bp
Accession: NZ_AP021895 Location: 3592963..3627332 Organism: Escherichia coli strain 2018-11-3CC Replicon: chromosome
Accession: NZ_AP021895 Location: 3592963..3627332 Organism: Escherichia coli strain 2018-11-3CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRR26_RS17295 () | 3590734..3591447 | - | 714 | WP_000119302.1 | hypothetical protein | - |
| HRR26_RS17300 () | 3591434..3592501 | - | 1068 | WP_001037132.1 | inovirus-type Gp2 protein | - |
| HRR26_RS17305 () | 3592623..3592841 | - | 219 | WP_000434497.1 | AlpA family phage regulatory protein | - |
| HRR26_RS17310 () | 3592963..3593820 | - | 858 | WP_000523418.1 | hypothetical protein | - |
| HRR26_RS17320 () | 3594237..3595490 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HRR26_RS17325 () | 3595502..3596605 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HRR26_RS17330 () | 3596893..3597948 | + | 1056 | WP_000749893.1 | phosphoporin PhoE | - |
| HRR26_RS17335 () | 3597987..3598388 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| HRR26_RS17340 () | 3598446..3599690 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3599106..3599186 | - | 81 | NuclAT_9 | - | - |
| - () | 3599106..3599186 | - | 81 | NuclAT_9 | - | - |
| - () | 3599106..3599186 | - | 81 | NuclAT_9 | - | - |
| - () | 3599106..3599186 | - | 81 | NuclAT_9 | - | - |
| HRR26_RS17345 () | 3599782..3600240 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| HRR26_RS17350 () | 3600501..3601958 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| HRR26_RS17355 () | 3602015..3602536 | - | 522 | Protein_3392 | peptide chain release factor H | - |
| HRR26_RS17360 () | 3602535..3602738 | - | 204 | Protein_3393 | RNA ligase RtcB family protein | - |
| HRR26_RS17365 () | 3602984..3603436 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| HRR26_RS17370 () | 3603446..3603844 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HRR26_RS17375 () | 3603847..3604140 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HRR26_RS17380 () | 3604192..3605244 | - | 1053 | WP_000691315.1 | DNA polymerase IV | - |
| HRR26_RS17385 () | 3605306..3606850 | + | 1545 | WP_115735755.1 | hypothetical protein ; Integrase | Integrase |
| HRR26_RS17390 () | 3606888..3607850 | + | 963 | WP_152952776.1 | hypothetical protein | - |
| HRR26_RS17395 () | 3607854..3608426 | - | 573 | WP_000086540.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HRR26_RS17400 () | 3608795..3609088 | - | 294 | WP_000896590.1 | hypothetical protein | - |
| HRR26_RS17405 () | 3609679..3610581 | + | 903 | WP_089536588.1 | helix-turn-helix domain-containing protein | - |
| HRR26_RS17410 () | 3610867..3611652 | - | 786 | WP_000207587.1 | Chemotaxis protein LafU | VF |
| HRR26_RS17415 () | 3611624..3613336 | + | 1713 | Protein_3404 | Flagellar biosynthesis protein FlhA | VF |
| HRR26_RS17420 () | 3613560..3614057 | - | 498 | WP_161222508.1 | REP-associated tyrosine transposase RayT | - |
| HRR26_RS17425 () | 3614233..3615006 | - | 774 | WP_015675129.1 | Murein DD-endopeptidase MepH | VF |
| HRR26_RS17430 () | 3615192..3615452 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| HRR26_RS17435 () | 3615455..3615733 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| HRR26_RS17440 () | 3615889..3616629 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| HRR26_RS17445 () | 3616600..3617367 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| HRR26_RS17450 () | 3617573..3618151 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| HRR26_RS17455 () | 3618391..3620835 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| HRR26_RS17460 () | 3620878..3621324 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| HRR26_RS17465 () | 3621505..3622275 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| HRR26_RS17470 () | 3622316..3622507 | - | 192 | Protein_3415 | transposase | - |
| HRR26_RS17475 () | 3622554..3623251 | + | 698 | Protein_3416 | IS1 family transposase | - |
| HRR26_RS17480 () | 3623245..3624024 | - | 780 | WP_172410981.1 | hypothetical protein | - |
| HRR26_RS17490 () | 3624561..3625292 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| HRR26_RS17495 () | 3625357..3625824 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| HRR26_RS17500 () | 3625821..3626543 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| HRR26_RS17505 () | 3626577..3627332 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| HRR26_RS17510 () | 3627404..3628762 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| HRR26_RS17515 () | 3628810..3629367 | - | 558 | Protein_3423 | class I SAM-dependent methyltransferase | - |
| HRR26_RS17520 () | 3629398..3630198 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| HRR26_RS17525 () | 3630439..3631353 | + | 915 | WP_000648572.1 | LysR family transcriptional regulator | - |
| HRR26_RS17530 () | 3631350..3632153 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|