MGE detailed information
MGE type: Prophage MGE length: 41825 bp
Accession: NZ_AP021894 Location: 2268267..2310091 Organism: Escherichia coli strain 2018-10-1CC Replicon: chromosome
Accession: NZ_AP021894 Location: 2268267..2310091 Organism: Escherichia coli strain 2018-10-1CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRR23_RS10980 () | 2264166..2265386 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| HRR23_RS10985 () | 2265511..2266206 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| HRR23_RS10990 () | 2266159..2267451 | - | 1293 | WP_074169909.1 | voltage-gated ClC-type chloride channel ClcB | - |
| HRR23_RS10995 () | 2267610..2268224 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| HRR23_RS11000 () | 2268267..2269121 | - | 855 | WP_000526477.1 | dimethyl sulfoxide reductase anchor subunit | - |
| HRR23_RS11005 () | 2269123..2269740 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| HRR23_RS11010 () | 2269751..2272174 | - | 2424 | WP_072169196.1 | dimethyl sulfoxide reductase subunit A | - |
| HRR23_RS11015 () | 2272235..2274661 | - | 2427 | WP_001761878.1 | dimethyl sulfoxide reductase subunit A | - |
| HRR23_RS11020 () | 2274860..2275165 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| HRR23_RS11025 () | 2275273..2275983 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| HRR23_RS11030 () | 2275986..2276546 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| HRR23_RS11035 () | 2276581..2276922 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| HRR23_RS11040 () | 2277057..2277383 | + | 327 | WP_001295395.1 | YnfA family protein | - |
| HRR23_RS11045 () | 2277589..2278803 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| HRR23_RS11050 () | 2278815..2279834 | + | 1020 | WP_172410192.1 | Zn-dependent oxidoreductase | - |
| HRR23_RS11055 () | 2279892..2280002 | + | 111 | WP_021531328.1 | hypothetical protein | - |
| HRR23_RS11060 () | 2280022..2281302 | - | 1281 | WP_000876979.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HRR23_RS11065 () | 2281337..2281588 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| HRR23_RS11070 () | 2281661..2282509 | - | 849 | WP_197746840.1 | exonuclease | - |
| HRR23_RS11075 () | 2282578..2283791 | + | 1214 | WP_162853977.1 | IS3 family transposase IS1203 | Transposase |
| HRR23_RS11080 () | 2283831..2284154 | + | 324 | Protein_2167 | DUF977 family protein | - |
| HRR23_RS11085 () | 2284151..2284507 | + | 357 | WP_001315552.1 | class I SAM-dependent methyltransferase | - |
| HRR23_RS11090 () | 2285118..2285382 | + | 265 | Protein_2169 | hypothetical protein | - |
| HRR23_RS11105 () | 2287433..2288773 | + | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| HRR23_RS11110 () | 2289210..2289542 | - | 333 | WP_001301033.1 | protein FlxA | - |
| HRR23_RS11115 () | 2289745..2290050 | - | 306 | WP_071593935.1 | hypothetical protein | - |
| HRR23_RS11120 () | 2290075..2290314 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HRR23_RS11125 () | 2290314..2290601 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HRR23_RS11130 () | 2290673..2290828 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HRR23_RS11135 () | 2291045..2291296 | + | 252 | WP_001463433.1 | hypothetical protein | - |
| HRR23_RS11140 () | 2291363..2291641 | + | 279 | WP_172410193.1 | hypothetical protein | - |
| HRR23_RS11145 () | 2291643..2292692 | + | 1050 | WP_001515372.1 | DUF968 domain-containing protein | - |
| HRR23_RS11150 () | 2292710..2293087 | + | 378 | WP_001204787.1 | antitermination protein | - |
| HRR23_RS11155 () | 2293243..2293767 | - | 525 | WP_000780584.1 | lipocalin family protein | - |
| HRR23_RS11160 () | 2293877..2294574 | + | 698 | Protein_2182 | IS1 family transposase | - |
| HRR23_RS11165 () | 2294721..2295434 | + | 714 | WP_001146314.1 | HTH-type transcriptional regulator GadW | VF |
| HRR23_RS11170 () | 2295625..2295840 | + | 216 | WP_001515371.1 | phage lysis protein EssD | - |
| HRR23_RS11175 () | 2295845..2296159 | + | 315 | WP_001515370.1 | YdfR family protein | - |
| HRR23_RS11180 () | 2296215..2296748 | + | 534 | WP_001515369.1 | lysozyme | - |
| HRR23_RS11185 () | 2296745..2297242 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HRR23_RS11190 () | 2297604..2297816 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HRR23_RS11195 () | 2297827..2298015 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| HRR23_RS11200 () | 2298018..2298083 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| HRR23_RS11205 () | 2298228..2299390 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| HRR23_RS11210 () | 2299423..2299578 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| HRR23_RS11215 () | 2299750..2299923 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HRR23_RS11220 () | 2300075..2300485 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| HRR23_RS11225 () | 2300543..2300776 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| HRR23_RS11230 () | 2301165..2301710 | + | 546 | WP_032187400.1 | DNA-packaging protein | - |
| HRR23_RS11235 () | 2301685..2303610 | + | 1926 | WP_032187399.1 | phage terminase large subunit family protein | - |
| HRR23_RS11240 () | 2303607..2303813 | + | 207 | WP_000198149.1 | gpW family protein | - |
| HRR23_RS11245 () | 2303810..2304439 | + | 630 | Protein_2199 | phage portal protein | - |
| HRR23_RS11250 () | 2304484..2304618 | + | 135 | WP_001301586.1 | hypothetical protein | - |
| HRR23_RS11255 () | 2304579..2306237 | + | 1659 | WP_001162608.1 | phage tail protein | - |
| HRR23_RS11260 () | 2306237..2306783 | + | 547 | Protein_2202 | tail fiber assembly protein | - |
| HRR23_RS11265 () | 2306881..2307471 | - | 591 | WP_032187390.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HRR23_RS11270 () | 2307788..2308021 | - | 234 | WP_172410194.1 | cold shock protein YdfK | - |
| HRR23_RS11275 () | 2308090..2308203 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| HRR23_RS11280 () | 2308808..2310091 | + | 1284 | Protein_2206 | MHS family MFS transporter YdfJ | - |
| HRR23_RS11285 () | 2310180..2311640 | + | 1461 | WP_000527813.1 | mannitol dehydrogenase family protein | - |
| HRR23_RS11290 () | 2311675..2311878 | - | 204 | WP_074465184.1 | putative selenium delivery protein YdfZ | - |
| HRR23_RS11295 () | 2312055..2312741 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| HRR23_RS11300 () | 2312830..2313576 | - | 747 | WP_134886861.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|