MGE detailed information
MGE type: Genomic_island MGE length: 20009 bp
Accession: NZ_AP021893 Location: 4075483..4095491 Organism: Escherichia coli strain 2018-06-4CC Replicon: chromosome
Accession: NZ_AP021893 Location: 4075483..4095491 Organism: Escherichia coli strain 2018-06-4CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRR20_RS19645 () | 4072008..4072733 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| HRR20_RS19650 () | 4072770..4073309 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| HRR20_RS19655 () | 4073374..4073928 | - | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| HRR20_RS19660 () | 4074410..4075006 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| HRR20_RS19665 () | 4075483..4076085 | - | 603 | WP_000790583.1 | type 1 fimbria switch DNA invertase FimB | - |
| HRR20_RS19670 () | 4077539..4078255 | + | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HRR20_RS19675 () | 4078275..4079381 | + | 1107 | WP_001353974.1 | N-acetylneuraminate epimerase | - |
| HRR20_RS19680 () | 4079446..4080426 | + | 981 | WP_001295601.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HRR20_RS19685 () | 4080434..4081084 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| HRR20_RS19690 () | 4082129..4082281 | - | 153 | WP_021581278.1 | hypothetical protein | - |
| HRR20_RS19695 () | 4082366..4082563 | - | 198 | WP_021581277.1 | DUF957 domain-containing protein | - |
| HRR20_RS19700 () | 4082583..4083071 | - | 489 | WP_021581276.1 | hypothetical protein | - |
| HRR20_RS19705 () | 4083068..4083445 | - | 378 | WP_001559913.1 | TA system toxin CbtA family protein | Toxin Detail |
| HRR20_RS19710 () | 4083536..4083904 | - | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HRR20_RS19715 () | 4084061..4084282 | - | 222 | WP_000692300.1 | DUF987 domain-containing protein | - |
| HRR20_RS19720 () | 4084351..4084827 | - | 477 | WP_001186774.1 | RadC family protein | - |
| HRR20_RS19725 () | 4084843..4085316 | - | 474 | WP_021581273.1 | antirestriction protein | - |
| HRR20_RS19730 () | 4085410..4085655 | - | 246 | WP_152922235.1 | antirestriction protein | - |
| HRR20_RS19735 () | 4085655..4086476 | - | 822 | WP_001519291.1 | DUF945 domain-containing protein | - |
| HRR20_RS19740 () | 4086844..4087326 | - | 483 | WP_001519290.1 | hypothetical protein | - |
| HRR20_RS19745 () | 4087687..4088229 | - | 543 | WP_001519289.1 | hypothetical protein | - |
| HRR20_RS19750 () | 4088362..4089432 | - | 1071 | WP_001519287.1 | patatin-like phospholipase family protein | - |
| HRR20_RS19755 () | 4089429..4090334 | - | 906 | Protein_3868 | chemotaxis protein | - |
| HRR20_RS19760 () | 4090331..4092715 | - | 2385 | WP_032287014.1 | dynamin family protein | - |
| HRR20_RS19765 () | 4092933..4093806 | - | 874 | Protein_3870 | GTPase family protein | - |
| HRR20_RS19770 () | 4093890..4094603 | - | 714 | WP_021581266.1 | hypothetical protein | - |
| HRR20_RS19775 () | 4094648..4094806 | - | 159 | WP_021581265.1 | hypothetical protein | - |
| HRR20_RS19780 () | 4096003..4096611 | - | 609 | WP_064717681.1 | hypothetical protein | - |
| HRR20_RS19785 () | 4096699..4096905 | - | 207 | WP_000211312.1 | AlpA family transcriptional regulator | - |
| HRR20_RS19790 () | 4098751..4099320 | + | 570 | WP_001519276.1 | inovirus Gp2 family protein | - |
| HRR20_RS19795 () | 4099488..4099871 | + | 384 | WP_152922116.1 | hypothetical protein | - |
| HRR20_RS19800 () | 4099868..4100293 | + | 426 | WP_152922117.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|