MGE detailed information
MGE type: Genomic_island MGE length: 16242 bp
Accession: NZ_AP021892 Location: 1883550..1899791 Organism: Escherichia coli strain 2018-01-1CC Replicon: chromosome
Accession: NZ_AP021892 Location: 1883550..1899791 Organism: Escherichia coli strain 2018-01-1CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRR21_RS09160 () | 1879053..1879454 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| HRR21_RS09165 () | 1879512..1880756 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 1880172..1880252 | - | 81 | NuclAT_8 | - | - |
| - () | 1880172..1880252 | - | 81 | NuclAT_8 | - | - |
| - () | 1880172..1880252 | - | 81 | NuclAT_8 | - | - |
| - () | 1880172..1880252 | - | 81 | NuclAT_8 | - | - |
| HRR21_RS09170 () | 1880848..1881306 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| HRR21_RS09175 () | 1881567..1883024 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| HRR21_RS09180 () | 1883081..1883602 | - | 522 | Protein_1799 | peptide chain release factor H | - |
| HRR21_RS09185 () | 1883601..1883804 | - | 204 | Protein_1800 | RNA ligase RtcB family protein | - |
| HRR21_RS09190 () | 1884050..1884502 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| HRR21_RS09195 () | 1884512..1884910 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HRR21_RS09200 () | 1884913..1885206 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HRR21_RS09205 () | 1885258..1886313 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| HRR21_RS09210 () | 1886384..1887169 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| HRR21_RS09215 () | 1887141..1888853 | + | 1713 | Protein_1806 | hypothetical protein | VF |
| HRR21_RS09220 () | 1889077..1889574 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| HRR21_RS09225 () | 1889750..1890523 | - | 774 | WP_015675129.1 | hypothetical protein | VF |
| HRR21_RS09230 () | 1890709..1890969 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| HRR21_RS09235 () | 1890972..1891250 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| HRR21_RS09240 () | 1891406..1892146 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| HRR21_RS09245 () | 1892117..1892884 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| HRR21_RS09250 () | 1893090..1893668 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| HRR21_RS09255 () | 1893908..1896352 | + | 2445 | WP_172409443.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| HRR21_RS09260 () | 1896395..1896841 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| HRR21_RS09265 () | 1897022..1897792 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| HRR21_RS09270 () | 1897833..1898969 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| HRR21_RS09275 () | 1899573..1899791 | - | 219 | WP_001101841.1 | hypothetical protein | - |
| HRR21_RS09280 () | 1899769..1903734 | - | 3966 | Protein_1819 | RHS repeat protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|