MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_AP021891 Location: 4136377..4145728 Organism: Escherichia coli strain 2017.01.04CC Replicon: chromosome
Accession: NZ_AP021891 Location: 4136377..4145728 Organism: Escherichia coli strain 2017.01.04CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VEGS_RS19965 () | 4131538..4132839 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| VEGS_RS19970 () | 4132955..4133293 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| VEGS_RS19975 () | 4133269..4134966 | + | 1698 | WP_000068902.1 | protein-disulfide reductase DsbD | - |
| VEGS_RS19980 () | 4135003..4135578 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| VEGS_RS19990 () | 4136377..4137915 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| VEGS_RS19995 () | 4138281..4139615 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| VEGS_RS20000 () | 4139695..4141842 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| VEGS_RS20005 () | 4141901..4143358 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| VEGS_RS20010 () | 4143595..4145112 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| VEGS_RS20015 () | 4145231..4145404 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| VEGS_RS20020 () | 4145432..4145728 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| VEGS_RS20025 () | 4145955..4146227 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| VEGS_RS20030 () | 4146239..4146469 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| VEGS_RS20035 () | 4146650..4148281 | + | 1632 | WP_001565376.1 | sensor histidine kinase | - |
| VEGS_RS20040 () | 4148278..4148997 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.003 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.003 |