MGE detailed information
MGE type: Prophage MGE length: 55062 bp
Accession: NZ_AP021890 Location: 2000776..2055837 Organism: Escherichia coli strain 2017.15.01CC Replicon: chromosome
Accession: NZ_AP021890 Location: 2000776..2055837 Organism: Escherichia coli strain 2017.15.01CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRR22_RS09425 () | 1996826..1997809 | + | 984 | WP_000387395.1 | zinc transporter ZntB | - |
| HRR22_RS09430 () | 1998084..1998257 | + | 174 | WP_001296046.1 | hypothetical protein | - |
| HRR22_RS09435 () | 1998287..1999660 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| HRR22_RS09440 () | 1999789..2000724 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| HRR22_RS09445 () | 2000776..2002011 | - | 1236 | WP_000040858.1 | Abequosyltransferase RfbV ; Integrase | Integrase |
| HRR22_RS09450 () | 2002013..2002228 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| HRR22_RS09455 () | 2002307..2002516 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2002332..2002510 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2002332..2002510 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2002332..2002510 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2002332..2002510 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| HRR22_RS09460 () | 2002509..2002703 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| HRR22_RS09465 () | 2002760..2003569 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| HRR22_RS09470 () | 2003562..2006153 | - | 2592 | WP_000105142.1 | exodeoxyribonuclease VIII | - |
| HRR22_RS09475 () | 2006255..2006530 | - | 276 | WP_000632297.1 | protein RacC | - |
| HRR22_RS09480 () | 2006605..2006775 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| HRR22_RS09485 () | 2006775..2006996 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| HRR22_RS09490 () | 2007438..2007926 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| HRR22_RS09495 () | 2007923..2008078 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| HRR22_RS09500 () | 2008478..2008897 | - | 420 | WP_000362155.1 | hypothetical protein | - |
| HRR22_RS09505 () | 2008998..2009279 | + | 282 | WP_000391949.1 | helix-turn-helix domain-containing protein | - |
| HRR22_RS09510 () | 2009263..2009688 | + | 426 | WP_000693836.1 | Rha family transcriptional regulator | - |
| HRR22_RS09515 () | 2009760..2010830 | + | 1071 | WP_001262352.1 | hypothetical protein | - |
| HRR22_RS09520 () | 2010871..2011293 | + | 423 | WP_001151151.1 | DUF977 family protein | - |
| HRR22_RS09525 () | 2011634..2013631 | + | 1998 | WP_001676522.1 | choline BCCT transporter BetT | - |
| HRR22_RS09530 () | 2013695..2014972 | + | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| HRR22_RS09535 () | 2015103..2015984 | - | 882 | WP_000019009.1 | LysR family transcriptional regulator | - |
| HRR22_RS09540 () | 2015981..2016673 | - | 693 | WP_063122196.1 | gamma-glutamylcyclotransferase | - |
| HRR22_RS09545 () | 2016685..2017884 | - | 1200 | WP_001117226.1 | MFS transporter | - |
| HRR22_RS09550 () | 2018608..2018946 | - | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| HRR22_RS09555 () | 2019760..2020359 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| HRR22_RS09560 () | 2020359..2020649 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| HRR22_RS09565 () | 2020646..2021188 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| HRR22_RS09570 () | 2021953..2022650 | + | 698 | Protein_1861 | IS1 family transposase IS1R | Transposase |
| HRR22_RS09575 () | 2023009..2023437 | + | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| HRR22_RS09580 () | 2023609..2023983 | + | 375 | WP_001348108.1 | hypothetical protein | - |
| HRR22_RS09585 () | 2024235..2024450 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| HRR22_RS09590 () | 2024450..2024947 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| HRR22_RS09595 () | 2025164..2025349 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| HRR22_RS09600 () | 2025546..2027003 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| HRR22_RS09605 () | 2027141..2027932 | + | 792 | WP_029488566.1 | ParB/Srx family N-terminal domain-containing protein | - |
| HRR22_RS09610 () | 2027925..2028857 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| HRR22_RS09615 () | 2028793..2029044 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| HRR22_RS09620 () | 2029048..2030141 | + | 1094 | Protein_1871 | terminase small subunit | - |
| HRR22_RS09625 () | 2030122..2031423 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| HRR22_RS09630 () | 2031426..2032832 | + | 1407 | WP_000763704.1 | DUF4055 domain-containing protein | - |
| HRR22_RS09635 () | 2032816..2033928 | + | 1113 | WP_001351715.1 | hypothetical protein | - |
| HRR22_RS09640 () | 2034033..2034797 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| HRR22_RS09645 () | 2034896..2036035 | + | 1140 | WP_063122197.1 | P22 coat - protein 5 family protein | - |
| HRR22_RS09650 () | 2036078..2036254 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| HRR22_RS09655 () | 2036258..2036653 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| HRR22_RS09660 () | 2036744..2037766 | + | 1023 | WP_000627495.1 | IS21 family transposase ISSen3 | Transposase |
| HRR22_RS09665 () | 2037763..2038545 | + | 783 | WP_001531258.1 | IS21 family transposase ISSen3 | Transposase |
| HRR22_RS09670 () | 2038630..2038995 | + | 366 | WP_074152101.1 | glutamate 5-kinase | - |
| HRR22_RS09675 () | 2038996..2039376 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| HRR22_RS09680 () | 2039373..2039765 | + | 393 | WP_000144678.1 | hypothetical protein | - |
| HRR22_RS09685 () | 2039792..2040754 | + | 963 | WP_029488565.1 | hypothetical protein | - |
| HRR22_RS09690 () | 2040905..2041264 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| HRR22_RS09695 () | 2041738..2044971 | + | 3234 | WP_001703076.1 | phage tail tape measure protein | - |
| HRR22_RS09700 () | 2044964..2045302 | + | 339 | WP_000024051.1 | phage tail protein | - |
| HRR22_RS09705 () | 2045302..2046000 | + | 699 | WP_001152434.1 | phage minor tail protein L | - |
| HRR22_RS09710 () | 2046006..2046749 | + | 744 | WP_063122198.1 | C40 family peptidase | - |
| HRR22_RS09715 () | 2046647..2047294 | + | 648 | WP_000741591.1 | tail assembly protein | - |
| HRR22_RS09720 () | 2047355..2050768 | + | 3414 | WP_172410349.1 | host specificity protein J | - |
| HRR22_RS09725 () | 2050839..2051438 | + | 600 | WP_001230279.1 | 2-heptyl-4(1H)-quinolone synthase subunit PqsC | VF |
| HRR22_RS09730 () | 2051503..2054574 | + | 3072 | WP_072059964.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HRR22_RS09735 () | 2054574..2055149 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| HRR22_RS09740 () | 2055247..2055837 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HRR22_RS09745 () | 2056154..2056387 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| HRR22_RS09750 () | 2056456..2056569 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| HRR22_RS09755 () | 2057346..2057780 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| HRR22_RS09760 () | 2057921..2059054 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|