MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 53759 bp
Accession: NZ_AP021889 Location: 1810350..1864108 Organism: Thiosulfatimonas sediminis strain aks77 Replicon: chromosome
Accession: NZ_AP021889 Location: 1810350..1864108 Organism: Thiosulfatimonas sediminis strain aks77 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRR27_RS08380 () | 1805844..1806332 | - | 489 | WP_173272731.1 | low molecular weight phosphotyrosine protein phosphatase | - |
| HRR27_RS08385 () | 1806390..1807094 | + | 705 | WP_173272733.1 | RluA family pseudouridine synthase | - |
| HRR27_RS12785 () | 1807280..1808746 | + | 1467 | WP_194240653.1 | hypothetical protein | - |
| HRR27_RS08395 () | 1808756..1809991 | + | 1236 | WP_173272735.1 | hypothetical protein | - |
| HRR27_RS08400 () | 1810655..1811503 | - | 849 | WP_173272737.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HRR27_RS08405 () | 1811496..1813589 | - | 2094 | WP_173272745.1 | TraI domain-containing protein | - |
| HRR27_RS08410 () | 1813574..1813969 | - | 396 | WP_173272747.1 | hypothetical protein | - |
| HRR27_RS08415 () | 1813953..1814282 | - | 330 | WP_173272749.1 | hypothetical protein | - |
| HRR27_RS08420 () | 1814493..1815218 | + | 726 | WP_173272751.1 | complement resistance protein TraT | - |
| HRR27_RS08425 () | 1815278..1815550 | - | 273 | WP_173272753.1 | hypothetical protein | - |
| HRR27_RS08430 () | 1815885..1816070 | + | 186 | WP_173272755.1 | hypothetical protein | - |
| HRR27_RS08435 () | 1816242..1816499 | - | 258 | WP_173272757.1 | DUF2442 domain-containing protein | - |
| HRR27_RS08440 () | 1816503..1816763 | - | 261 | WP_173272758.1 | DUF4160 domain-containing protein | - |
| HRR27_RS08445 () | 1816777..1817328 | - | 552 | WP_173272760.1 | Tn3 family transposase ISPsy42 | Transposase |
| HRR27_RS08450 () | 1817609..1817752 | - | 144 | WP_173272762.1 | hypothetical protein | - |
| HRR27_RS08455 () | 1817749..1818258 | - | 510 | WP_173272764.1 | hypothetical protein | - |
| HRR27_RS08460 () | 1818566..1819231 | - | 666 | WP_173272766.1 | hypothetical protein | - |
| HRR27_RS08465 () | 1819423..1819836 | - | 414 | WP_173272767.1 | hypothetical protein | - |
| HRR27_RS08470 () | 1819860..1820234 | - | 375 | WP_173272769.1 | hypothetical protein | - |
| HRR27_RS08475 () | 1820245..1820658 | - | 414 | WP_173272771.1 | hypothetical protein | - |
| HRR27_RS08480 () | 1820843..1821496 | + | 654 | WP_173272773.1 | hypothetical protein | - |
| HRR27_RS08485 () | 1821493..1821708 | + | 216 | WP_173272775.1 | hypothetical protein | - |
| HRR27_RS08490 () | 1821872..1822069 | - | 198 | WP_173272777.1 | hypothetical protein | - |
| HRR27_RS08495 () | 1822590..1822886 | - | 297 | WP_173272779.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HRR27_RS08500 () | 1822907..1823146 | - | 240 | WP_173272781.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HRR27_RS08505 () | 1823233..1823676 | - | 444 | WP_173272783.1 | hypothetical protein | - |
| HRR27_RS08510 () | 1824213..1824404 | - | 192 | WP_173272785.1 | hypothetical protein | - |
| HRR27_RS08515 () | 1824639..1824923 | - | 285 | WP_173272787.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HRR27_RS08520 () | 1824913..1825101 | - | 189 | WP_197905452.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HRR27_RS08525 () | 1825310..1825723 | + | 414 | WP_173272789.1 | hypothetical protein | - |
| HRR27_RS08530 () | 1825767..1827524 | - | 1758 | WP_173272791.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HRR27_RS08535 () | 1827536..1828903 | - | 1368 | WP_173272793.1 | hypothetical protein | - |
| HRR27_RS08540 () | 1828900..1829415 | - | 516 | WP_173272795.1 | hypothetical protein | - |
| HRR27_RS08545 () | 1829405..1832290 | - | 2886 | WP_173272797.1 | conjugative transfer ATPase | - |
| HRR27_RS08550 () | 1832291..1832662 | - | 372 | WP_197905396.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HRR27_RS12805 () | 1832622..1834115 | - | 1494 | WP_197905397.1 | TIGR03752 family integrating conjugative element protein | - |
| HRR27_RS08555 () | 1834112..1834954 | - | 843 | WP_173272801.1 | DUF3438 family protein | - |
| HRR27_RS08560 () | 1834951..1835697 | - | 747 | WP_173272803.1 | DUF2895 family protein | - |
| HRR27_RS08565 () | 1835715..1836062 | - | 348 | WP_173272805.1 | DUF3487 family protein | - |
| HRR27_RS08570 () | 1836076..1836477 | - | 402 | WP_173272807.1 | hypothetical protein | - |
| HRR27_RS08575 () | 1836763..1837185 | - | 423 | WP_173272809.1 | RAQPRD family integrative conjugative element protein | - |
| HRR27_RS08580 () | 1837675..1838334 | - | 660 | WP_173272811.1 | DUF4400 domain-containing protein | - |
| HRR27_RS08585 () | 1838335..1840422 | - | 2088 | WP_173272813.1 | type IV conjugative transfer system coupling protein TraD | - |
| HRR27_RS08590 () | 1840422..1840838 | - | 417 | WP_173272815.1 | integrating conjugative element protein | - |
| HRR27_RS08595 () | 1840804..1841289 | - | 486 | WP_173272817.1 | hypothetical protein | VF |
| HRR27_RS08600 () | 1841291..1842034 | - | 744 | WP_173272819.1 | hypothetical protein | - |
| HRR27_RS08605 () | 1842031..1843023 | - | 993 | WP_173272821.1 | hypothetical protein | - |
| HRR27_RS08610 () | 1843047..1844198 | - | 1152 | WP_173272823.1 | TraU family protein | - |
| HRR27_RS08615 () | 1844203..1845048 | - | 846 | WP_173272825.1 | hypothetical protein | VF |
| HRR27_RS08620 () | 1845192..1845779 | - | 588 | WP_173272827.1 | hypothetical protein | - |
| HRR27_RS08625 () | 1845769..1846068 | - | 300 | WP_173272829.1 | hypothetical protein | - |
| HRR27_RS08630 () | 1846512..1847537 | - | 1026 | WP_173272831.1 | DUF1738 domain-containing protein | - |
| HRR27_RS08635 () | 1848035..1848718 | - | 684 | WP_173272833.1 | hypothetical protein | - |
| HRR27_RS08640 () | 1848962..1849201 | - | 240 | WP_173272835.1 | hypothetical protein | - |
| HRR27_RS08645 () | 1849406..1849870 | - | 465 | WP_173272837.1 | hypothetical protein | - |
| HRR27_RS08650 () | 1850764..1851288 | - | 525 | WP_173272839.1 | DUF3577 domain-containing protein | - |
| HRR27_RS08655 () | 1851495..1853618 | - | 2124 | WP_173272841.1 | type I DNA topoisomerase | - |
| HRR27_RS08660 () | 1853618..1853800 | - | 183 | WP_173272843.1 | hypothetical protein | - |
| HRR27_RS08665 () | 1853803..1854219 | - | 417 | WP_173272845.1 | single-stranded DNA-binding protein | - |
| HRR27_RS08670 () | 1854364..1854852 | - | 489 | WP_173272847.1 | hypothetical protein | - |
| HRR27_RS08675 () | 1855297..1855548 | - | 252 | WP_173272849.1 | hypothetical protein | - |
| HRR27_RS08680 () | 1855613..1856569 | - | 957 | WP_173272851.1 | DNA-binding protein | - |
| HRR27_RS08685 () | 1856766..1857332 | - | 567 | WP_173272853.1 | hypothetical protein | - |
| HRR27_RS08690 () | 1857325..1858062 | - | 738 | WP_173272855.1 | TIGR03761 family integrating conjugative element protein | - |
| HRR27_RS08695 () | 1858331..1858585 | - | 255 | WP_173272857.1 | hypothetical protein | - |
| HRR27_RS08700 () | 1858604..1858795 | - | 192 | WP_173272859.1 | hypothetical protein | - |
| HRR27_RS08705 () | 1858797..1859033 | - | 237 | WP_173272861.1 | hypothetical protein | - |
| HRR27_RS08710 () | 1859030..1860034 | - | 1005 | WP_173272863.1 | hypothetical protein | - |
| HRR27_RS08715 () | 1860031..1860900 | - | 870 | WP_173272865.1 | replication initiator protein A | - |
| HRR27_RS08720 () | 1860904..1861482 | - | 579 | WP_173272867.1 | DUF2857 family protein | - |
| HRR27_RS08725 () | 1861475..1863112 | - | 1638 | WP_173272869.1 | ParB N-terminal domain-containing protein | - |
| HRR27_RS08730 () | 1863105..1863932 | - | 828 | WP_173272871.1 | ParA family protein | - |
| HRR27_RS08740 () | 1865004..1866704 | + | 1701 | WP_173272873.1 | methyl-accepting chemotaxis protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|