MGE detailed information
MGE type: Prophage MGE length: 33180 bp
Accession: NZ_AP021879 Location: 889400..922579 Organism: Desulfosarcina ovata subsp. ovata strain oXyS1 Replicon: chromosome
Accession: NZ_AP021879 Location: 889400..922579 Organism: Desulfosarcina ovata subsp. ovata strain oXyS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GN112_RS03835 () | 884422..886143 | - | 1722 | WP_197743248.1 | transposase | - |
| GN112_RS03840 () | 886580..886756 | - | 177 | WP_155314123.1 | AAA family ATPase | - |
| GN112_RS03845 () | 887061..888609 | - | 1549 | Protein_762 | IS66 family transposase | - |
| GN112_RS03850 () | 888673..889020 | - | 348 | WP_155309025.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| GN112_RS03855 () | 889017..889343 | - | 327 | WP_155309026.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| GN112_RS03860 () | 889439..890668 | + | 1230 | WP_197743249.1 | hypothetical protein | - |
| GN112_RS03865 () | 890692..891222 | - | 531 | WP_197743250.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GN112_RS03870 () | 891476..892168 | + | 693 | WP_155309027.1 | hypothetical protein | - |
| GN112_RS03875 () | 892204..894072 | + | 1869 | WP_155309028.1 | hypothetical protein ; Integrase | Integrase |
| GN112_RS03880 () | 894106..894567 | - | 462 | Protein_769 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GN112_RS03885 () | 894554..894913 | - | 360 | Protein_770 | hypothetical protein ; Integrase | Integrase |
| GN112_RS03890 () | 894933..896264 | - | 1332 | WP_155308529.1 | transposase | - |
| GN112_RS03895 () | 896505..897182 | - | 678 | Protein_772 | Tyrosine recombinase XerD ; Integrase | Integrase |
| GN112_RS03900 () | 897149..897919 | - | 771 | Protein_773 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GN112_RS03905 () | 898211..898441 | - | 231 | WP_155309029.1 | hypothetical protein | - |
| GN112_RS03910 () | 898671..899036 | + | 366 | WP_197743251.1 | hypothetical protein | - |
| GN112_RS03915 () | 899041..899703 | + | 663 | WP_176603536.1 | DNA methylase | - |
| GN112_RS03920 () | 899905..900744 | - | 840 | WP_155309030.1 | ATP-binding protein | - |
| GN112_RS03925 () | 900741..901346 | - | 606 | Protein_778 | IS481 family transposase ISTni2 | Transposase |
| GN112_RS03930 () | 901465..902460 | - | 996 | WP_155309031.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GN112_RS03935 () | 902457..903392 | - | 936 | WP_155309032.1 | IS91 family transposase ISTha3 | Transposase |
| GN112_RS03940 () | 903389..904633 | - | 1245 | WP_155309033.1 | Tyrosine recombinase XerC | VF |
| GN112_RS03945 () | 904767..905615 | - | 849 | Protein_782 | IS481 family transposase ISTni2 | Transposase |
| GN112_RS03950 () | 905777..906247 | - | 471 | WP_155309034.1 | hypothetical protein | - |
| GN112_RS03955 () | 906482..908161 | + | 1680 | WP_155309035.1 | hypothetical protein ; Integrase | Integrase |
| GN112_RS03960 () | 908137..908805 | + | 669 | WP_155309036.1 | ATP-binding protein | - |
| GN112_RS03965 () | 909101..909577 | - | 477 | WP_197743252.1 | hypothetical protein | - |
| GN112_RS03970 () | 909723..910031 | + | 309 | WP_155309037.1 | hypothetical protein | - |
| GN112_RS03975 () | 910151..910771 | + | 621 | WP_155309038.1 | hypothetical protein | - |
| GN112_RS03980 () | 910819..912255 | + | 1437 | WP_155309039.1 | IS481 family transposase ISTni2 | Transposase |
| GN112_RS03985 () | 912252..913076 | + | 825 | WP_155309040.1 | ATP-binding protein | - |
| GN112_RS03990 () | 913093..913296 | + | 204 | WP_155309041.1 | hypothetical protein | - |
| GN112_RS03995 () | 914168..915037 | + | 870 | WP_155309042.1 | hypothetical protein | - |
| GN112_RS04000 () | 914995..916557 | + | 1563 | WP_162458774.1 | hypothetical protein ; Integrase | Integrase |
| GN112_RS04005 () | 916554..917288 | + | 735 | WP_155309044.1 | AAA family ATPase | - |
| GN112_RS04010 () | 917302..917760 | + | 459 | WP_155309045.1 | hypothetical protein | - |
| GN112_RS04020 () | 918690..919338 | + | 649 | Protein_796 | radical SAM protein | - |
| GN112_RS04025 () | 919366..919758 | - | 393 | WP_162458775.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GN112_RS04030 () | 919778..920008 | - | 231 | WP_155309047.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| GN112_RS04035 () | 920339..920989 | + | 651 | WP_155309048.1 | helix-turn-helix domain-containing protein | - |
| GN112_RS04040 () | 920994..921248 | + | 255 | WP_155309049.1 | hypothetical protein | - |
| GN112_RS04045 () | 921766..921957 | + | 192 | WP_155309050.1 | ferredoxin | - |
| GN112_RS04050 () | 922004..922579 | + | 576 | WP_155309051.1 | rubrerythrin family protein | - |
| GN112_RS04055 () | 922740..924806 | - | 2067 | WP_155309052.1 | elongation factor G | - |
| GN112_RS04060 () | 924919..925668 | - | 750 | WP_155309053.1 | TlyA family RNA methyltransferase | - |
| GN112_RS04065 () | 925628..927565 | - | 1938 | WP_155314126.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|