MGE detailed information
MGE type: Genomic_island MGE length: 76686 bp
Accession: NZ_AP021874 Location: 1320683..1397368 Organism: Desulfosarcina alkanivorans strain PL12 Replicon: chromosome
Accession: NZ_AP021874 Location: 1320683..1397368 Organism: Desulfosarcina alkanivorans strain PL12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSCA_RS05785 () | 1319072..1319668 | + | 597 | WP_155315524.1 | hypothetical protein | - |
| DSCA_RS05790 () | 1319880..1320170 | + | 291 | WP_155315525.1 | hypothetical protein | - |
| DSCA_RS05795 () | 1320683..1321210 | + | 528 | WP_155315526.1 | hypothetical protein | - |
| DSCA_RS05800 () | 1321594..1322190 | - | 597 | WP_155315527.1 | IS1380 family transposase ISCph9 | Transposase |
| DSCA_RS05805 () | 1322377..1322619 | + | 243 | WP_155315528.1 | ribbon-helix-helix protein, CopG family | - |
| DSCA_RS05810 () | 1322612..1322893 | + | 282 | WP_155315529.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSCA_RS05815 () | 1323562..1324620 | - | 1059 | WP_155315530.1 | hypothetical protein | - |
| DSCA_RS05820 () | 1324651..1325097 | - | 447 | WP_155315531.1 | DUF86 domain-containing protein | - |
| DSCA_RS05825 () | 1325090..1325602 | - | 513 | WP_155315532.1 | nucleotidyltransferase domain-containing protein | - |
| DSCA_RS05830 () | 1326110..1326523 | - | 414 | WP_197904750.1 | nucleotidyltransferase domain-containing protein | - |
| DSCA_RS05835 () | 1326432..1326821 | - | 390 | WP_155315534.1 | HEPN domain-containing protein | - |
| DSCA_RS05840 () | 1327021..1328139 | - | 1119 | WP_155315535.1 | glycosyltransferase family 2 protein | - |
| DSCA_RS05845 () | 1328159..1330054 | - | 1896 | WP_155315536.1 | Amidophosphoribosyltransferase | VF |
| DSCA_RS05850 () | 1330086..1331093 | - | 1008 | WP_155315537.1 | NAD-dependent epimerase/dehydratase family protein | - |
| DSCA_RS05855 () | 1331086..1332477 | - | 1392 | WP_155315538.1 | GMC family oxidoreductase | - |
| DSCA_RS05860 () | 1333479..1335365 | - | 1887 | WP_155315539.1 | hypothetical protein | - |
| DSCA_RS05865 () | 1335648..1336446 | - | 799 | Protein_1162 | IS21 family transposase ISPepr5 | Transposase |
| DSCA_RS05870 () | 1336672..1337139 | + | 468 | WP_155315540.1 | IS21 family transposase ISSpu5 | Transposase |
| DSCA_RS05875 () | 1337163..1337657 | + | 495 | WP_155315541.1 | hypothetical protein | VF |
| DSCA_RS05880 () | 1337654..1338103 | + | 450 | WP_155315542.1 | IS21 family transposase ISPepr5 | Transposase |
| DSCA_RS05885 () | 1338194..1339753 | + | 1560 | WP_155315543.1 | IS21 family transposase ISPre4 | Transposase |
| DSCA_RS05890 () | 1339750..1340508 | + | 759 | WP_155315544.1 | IS21 family transposase ISGur9 | Transposase |
| DSCA_RS05895 () | 1340892..1341920 | - | 1029 | WP_155315545.1 | hypothetical protein | - |
| DSCA_RS05900 () | 1342065..1342376 | + | 312 | Protein_1169 | ATP-binding protein | - |
| DSCA_RS05905 () | 1342489..1342917 | + | 429 | WP_155315546.1 | IS4 family transposase ISDpr2 | Transposase |
| DSCA_RS05910 () | 1343027..1344162 | + | 1136 | WP_155315547.1 | IS3 family transposase ISGxy1 | Transposase |
| DSCA_RS05915 () | 1344209..1345012 | + | 804 | WP_167527628.1 | IS3 family transposase ISGxy1 | Transposase |
| DSCA_RS05920 () | 1345272..1347089 | - | 1818 | WP_155315549.1 | HAD family hydrolase | - |
| DSCA_RS05925 () | 1347117..1348247 | - | 1131 | WP_155315550.1 | glycosyltransferase | - |
| DSCA_RS05930 () | 1348528..1349730 | - | 1203 | WP_155315551.1 | glycosyltransferase family 2 protein | - |
| DSCA_RS05935 () | 1349758..1350849 | - | 1092 | WP_167527629.1 | peptidoglycan bridge formation glycyltransferase FemA/FemB family protein | - |
| DSCA_RS05940 () | 1350868..1352736 | - | 1869 | WP_155315553.1 | Amidophosphoribosyltransferase | VF |
| DSCA_RS05945 () | 1352752..1353294 | - | 543 | WP_155315554.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| DSCA_RS05950 () | 1353291..1354487 | - | 1197 | WP_155315555.1 | ATP-grasp domain-containing protein | - |
| DSCA_RS05955 () | 1354501..1355664 | - | 1164 | WP_155315556.1 | glycosyltransferase family 4 protein | - |
| DSCA_RS05960 () | 1355661..1356539 | - | 879 | WP_155315557.1 | hypothetical protein | - |
| DSCA_RS05965 () | 1356536..1357537 | - | 1002 | WP_167527630.1 | O-antigen ligase family protein | - |
| DSCA_RS05970 () | 1357816..1359255 | - | 1440 | WP_155315559.1 | lipopolysaccharide biosynthesis protein | - |
| DSCA_RS05975 () | 1359772..1361034 | - | 1263 | WP_155315560.1 | glycosyltransferase | - |
| DSCA_RS05980 () | 1361206..1361595 | + | 390 | WP_155315561.1 | hypothetical protein | - |
| DSCA_RS05985 () | 1361795..1362967 | + | 1173 | WP_155315562.1 | transposase | - |
| DSCA_RS05990 () | 1362910..1363539 | + | 630 | WP_167527631.1 | transposase | - |
| DSCA_RS05995 () | 1363693..1364847 | - | 1155 | WP_155315564.1 | hypothetical protein | - |
| DSCA_RS06000 () | 1364837..1365706 | - | 870 | WP_155315565.1 | AAC(3) family N-acetyltransferase | - |
| DSCA_RS06005 () | 1365699..1367183 | - | 1485 | WP_155315566.1 | DUF362 domain-containing protein | - |
| DSCA_RS06010 () | 1367255..1367791 | + | 537 | WP_167527632.1 | ISL3 family transposase ISVa7 | Transposase |
| DSCA_RS06015 () | 1367901..1369403 | - | 1503 | WP_155315568.1 | exosortase W | - |
| DSCA_RS06020 () | 1369403..1370581 | - | 1179 | WP_155315569.1 | DegT/DnrJ/EryC1/StrS aminotransferase family protein | - |
| DSCA_RS06025 () | 1370712..1371776 | - | 1065 | WP_155315570.1 | FemAB family PEP-CTERM system-associated protein | - |
| DSCA_RS06030 () | 1371867..1373405 | - | 1539 | WP_155315571.1 | AMP-binding protein | - |
| DSCA_RS06035 () | 1373669..1374322 | - | 654 | WP_155315572.1 | hypothetical protein | - |
| DSCA_RS06040 () | 1374315..1374671 | - | 357 | WP_155315573.1 | hypothetical protein | - |
| DSCA_RS06045 () | 1374885..1375220 | - | 336 | WP_155315574.1 | VOC family protein | - |
| DSCA_RS06050 () | 1375253..1376389 | - | 1137 | WP_155315575.1 | UDP-N-acetylglucosamine 2-epimerase | VF |
| DSCA_RS06055 () | 1376554..1376928 | - | 375 | WP_155315576.1 | GxxExxY protein | - |
| DSCA_RS06060 () | 1377086..1378345 | - | 1260 | WP_155320325.1 | MBL fold metallo-hydrolase | - |
| DSCA_RS06065 () | 1378652..1379032 | - | 381 | WP_155315577.1 | GxxExxY protein | - |
| DSCA_RS06070 () | 1379677..1379874 | + | 198 | WP_155315578.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| DSCA_RS06075 () | 1379871..1380248 | + | 378 | WP_155315579.1 | PIN domain-containing protein | - |
| DSCA_RS06080 () | 1380671..1381087 | - | 417 | WP_155315580.1 | DUF86 domain-containing protein | - |
| DSCA_RS06085 () | 1381080..1381496 | - | 417 | WP_155315581.1 | nucleotidyltransferase domain-containing protein | - |
| DSCA_RS06090 () | 1381901..1382308 | - | 408 | WP_197904751.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DSCA_RS06095 () | 1382305..1382535 | - | 231 | WP_155315582.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DSCA_RS06100 () | 1382946..1383215 | + | 270 | WP_155320327.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| DSCA_RS06105 () | 1383212..1383496 | + | 285 | WP_155315583.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DSCA_RS06110 () | 1384542..1384925 | - | 384 | WP_155315584.1 | GxxExxY protein | - |
| DSCA_RS06115 () | 1385415..1387166 | - | 1752 | WP_155315585.1 | acyl--CoA ligase | - |
| DSCA_RS06120 () | 1387511..1387756 | - | 246 | WP_155315586.1 | acyl carrier protein | - |
| DSCA_RS06125 () | 1388124..1388507 | - | 384 | WP_155315587.1 | GxxExxY protein | - |
| DSCA_RS06130 () | 1389080..1390183 | - | 1104 | WP_155315588.1 | NAD(+) synthase | - |
| DSCA_RS06135 () | 1390336..1390698 | - | 363 | WP_155315589.1 | four helix bundle protein | - |
| DSCA_RS06140 () | 1390762..1392108 | - | 1347 | WP_155315590.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| DSCA_RS06145 () | 1392227..1392589 | - | 363 | WP_155315591.1 | four helix bundle protein | - |
| DSCA_RS06150 () | 1392659..1393567 | - | 909 | WP_155320328.1 | polysaccharide deacetylase family protein | - |
| DSCA_RS32105 () | 1393562..1393717 | - | 156 | Protein_1220 | polysaccharide deacetylase | - |
| DSCA_RS06155 () | 1393952..1395220 | - | 1269 | WP_155315592.1 | outer membrane beta-barrel protein | - |
| DSCA_RS06160 () | 1396355..1396939 | - | 585 | WP_155315593.1 | hypothetical protein | VF |
| DSCA_RS06165 () | 1397006..1397368 | - | 363 | WP_155315594.1 | four helix bundle protein | - |
| DSCA_RS06170 () | 1397420..1398448 | - | 1029 | WP_155315595.1 | NAD-dependent epimerase | - |
| DSCA_RS06175 () | 1398902..1400296 | - | 1395 | WP_155315596.1 | TIGR03013 family PEP-CTERM/XrtA system glycosyltransferase | - |
| DSCA_RS06180 () | 1400400..1401251 | - | 852 | WP_155315597.1 | CpsD/CapB family tyrosine-protein kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|