MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 75595 bp
Accession: NZ_AP020318 Location: 4159..79753 Organism: Staphylococcus aureus strain KUH180038 Replicon: chromosome
Accession: NZ_AP020318 Location: 4159..79753 Organism: Staphylococcus aureus strain KUH180038 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F6Y16_RS00010 () | 1..1662 | + | 1662 | WP_150014903.1 | terminase large subunit | - |
| F6Y16_RS00015 () | 1678..2865 | + | 1188 | WP_000025274.1 | phage portal protein | - |
| F6Y16_RS00020 () | 2849..3586 | + | 738 | WP_000642727.1 | Clp protease ClpP | - |
| F6Y16_RS00025 () | 3610..4755 | + | 1146 | WP_000154559.1 | phage major capsid protein | - |
| F6Y16_RS00030 () | 4775..5059 | + | 285 | WP_000238236.1 | hypothetical protein | - |
| F6Y16_RS00035 () | 5049..5333 | + | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| F6Y16_RS00040 () | 5317..5679 | + | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| F6Y16_RS00045 () | 5676..6080 | + | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| F6Y16_RS00050 () | 6077..6484 | + | 408 | WP_000565498.1 | hypothetical protein | - |
| F6Y16_RS00055 () | 6485..7129 | + | 645 | WP_000268735.1 | phage tail protein | - |
| F6Y16_RS00060 () | 7171..7395 | + | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| F6Y16_RS00065 () | 7445..7795 | + | 351 | WP_001096355.1 | hypothetical protein | - |
| F6Y16_RS00070 () | 8040..12584 | + | 4545 | WP_000504557.1 | phage tail tape measure protein | - |
| F6Y16_RS00075 () | 12581..14065 | + | 1485 | WP_000567393.1 | phage tail family protein | - |
| F6Y16_RS00080 () | 14081..17866 | + | 3786 | WP_000582184.1 | hypothetical protein | - |
| F6Y16_RS00085 () | 17856..18008 | + | 153 | WP_000654329.1 | hypothetical protein | - |
| F6Y16_RS00090 () | 18055..18342 | + | 288 | WP_001040255.1 | hypothetical protein | - |
| F6Y16_RS00095 () | 18398..18772 | + | 375 | WP_000340977.1 | hypothetical protein | - |
| F6Y16_RS00100 () | 19193..19966 | + | 774 | WP_025174055.1 | Enterotoxin type E | VF |
| F6Y16_RS00105 () | 20169..20345 | + | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| - () | 20333..20507 | - | 175 | - | - | Antitoxin Detail |
| F6Y16_RS00115 () | 20557..20811 | + | 255 | WP_000611512.1 | phage holin | - |
| F6Y16_RS00120 () | 20823..21578 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| F6Y16_RS00125 () | 21769..22260 | + | 492 | WP_000920038.1 | Staphylokinase | VF |
| F6Y16_RS00145 () | 22911..23246 | + | 336 | Protein_25 | SH3 domain-containing protein | - |
| F6Y16_RS00150 () | 23757..24107 | + | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| F6Y16_RS00155 () | 24160..24420 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| F6Y16_RS00165 () | 24731..24910 | - | 180 | WP_000669791.1 | hypothetical protein | - |
| F6Y16_RS00170 () | 25232..25482 | - | 251 | Protein_29 | Phospholipase C | VF |
| F6Y16_RS00175 () | 25868..27922 | + | 2055 | WP_000669721.1 | 65 kDa membrane protein | VF |
| F6Y16_RS00180 () | 28246..29532 | - | 1287 | WP_001068542.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| F6Y16_RS00185 () | 29732..29830 | + | 99 | WP_000990056.1 | hypothetical protein | - |
| F6Y16_RS00190 () | 30073..30249 | + | 177 | WP_000681968.1 | hypothetical protein | - |
| F6Y16_RS00195 () | 30508..30888 | + | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| F6Y16_RS00200 () | 30885..31781 | + | 897 | WP_000991302.1 | ABC transporter ATP-binding protein NatA | VF |
| F6Y16_RS00205 () | 31782..32462 | + | 681 | WP_108932450.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| F6Y16_RS00210 () | 32459..33331 | + | 873 | WP_000763048.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtC | - |
| F6Y16_RS00215 () | 33331..34071 | + | 741 | WP_001221651.1 | phenol-soluble modulin export ABC transporter permease subunit PmtD | - |
| F6Y16_RS00220 () | 34137..34700 | - | 564 | WP_000182842.1 | thioredoxin family protein | - |
| F6Y16_RS00225 () | 34821..35345 | + | 525 | WP_000966288.1 | membrane protein | - |
| F6Y16_RS00230 () | 35405..35962 | + | 558 | WP_150014906.1 | DUF1700 domain-containing protein | - |
| F6Y16_RS00235 () | 35959..36801 | + | 843 | WP_000713072.1 | DUF4097 family beta strand repeat protein | - |
| F6Y16_RS00240 () | 36858..37898 | - | 1041 | WP_001188077.1 | linear amide C-N hydrolase | - |
| F6Y16_RS00245 () | 38292..38765 | - | 474 | WP_078096690.1 | IS30 family transposase ISSau5 | Transposase |
| F6Y16_RS00250 () | 38746..39276 | - | 531 | WP_108957673.1 | IS30 family transposase ISSau5 | Transposase |
| F6Y16_RS00255 () | 39388..39750 | - | 363 | WP_031904066.1 | cystatin-like fold lipoprotein | - |
| F6Y16_RS00260 () | 39798..40391 | - | 594 | WP_031904065.1 | hypothetical protein | - |
| F6Y16_RS00265 () | 40398..41435 | - | 1038 | WP_001553872.1 | CHAP domain-containing protein | - |
| F6Y16_RS00270 () | 41425..43341 | - | 1917 | WP_150014909.1 | hypothetical protein | - |
| F6Y16_RS14585 () | 43357..43524 | - | 168 | WP_001553877.1 | hypothetical protein | - |
| F6Y16_RS00275 () | 43531..44889 | - | 1359 | WP_001553878.1 | DUF87 domain-containing protein | - |
| F6Y16_RS00280 () | 45122..47617 | - | 2496 | WP_001553882.1 | ATP-binding protein | - |
| F6Y16_RS00285 () | 47652..48041 | - | 390 | WP_031904063.1 | conjugal transfer protein | - |
| F6Y16_RS00290 () | 48047..48307 | - | 261 | WP_001553885.1 | hypothetical protein | - |
| F6Y16_RS00295 () | 48312..49373 | - | 1062 | WP_031904062.1 | conjugal transfer protein | - |
| F6Y16_RS00300 () | 49459..50535 | - | 1077 | WP_001553889.1 | replication initiation factor domain-containing protein | - |
| F6Y16_RS00305 () | 50715..51017 | - | 303 | WP_001553891.1 | hypothetical protein | - |
| F6Y16_RS00310 () | 51021..51356 | - | 336 | WP_001553893.1 | DUF961 family protein | - |
| F6Y16_RS00315 () | 51399..51701 | - | 303 | WP_001553895.1 | hypothetical protein | - |
| F6Y16_RS00325 () | 52549..52722 | + | 174 | WP_000267034.1 | hypothetical protein | - |
| F6Y16_RS00330 () | 53069..53277 | + | 209 | Protein_61 | transposase | - |
| F6Y16_RS00335 () | 53295..53600 | - | 306 | Protein_62 | YolD-like family protein | - |
| F6Y16_RS00340 () | 53785..54897 | + | 1113 | WP_001820623.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| F6Y16_RS00345 () | 54900..56963 | + | 2064 | WP_000026852.1 | IS91 family transposase ISWz1 | Transposase |
| F6Y16_RS00350 () | 56972..57337 | + | 366 | WP_000410572.1 | hypothetical protein | - |
| F6Y16_RS00355 () | 57342..58711 | + | 1370 | Protein_66 | hypothetical protein | - |
| F6Y16_RS00360 () | 58754..59164 | - | 411 | WP_000612782.1 | YolD-like family protein | - |
| F6Y16_RS00365 () | 59473..60318 | - | 846 | WP_000733625.1 | Beta-lactamase | ARG |
| F6Y16_RS00370 () | 60425..62182 | + | 1758 | WP_001096379.1 | beta-lactam sensor/signal transducer BlaR1 | - |
| F6Y16_RS00375 () | 62172..62552 | + | 381 | WP_001284657.1 | penicillinase repressor BlaI | - |
| F6Y16_RS00380 () | 63011..64039 | + | 1029 | WP_000181322.1 | lactonase family protein | - |
| F6Y16_RS00385 () | 64159..65538 | - | 1380 | WP_001021214.1 | aldehyde dehydrogenase | - |
| F6Y16_RS00390 () | 65590..65763 | + | 174 | WP_001790680.1 | hypothetical protein | - |
| F6Y16_RS00395 () | 65958..66887 | - | 930 | WP_001140871.1 | manganese-dependent inorganic pyrophosphatase | - |
| F6Y16_RS00400 () | 66940..67500 | - | 561 | WP_000149686.1 | Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | VF |
| F6Y16_RS00405 () | 67872..68969 | + | 1098 | WP_000275730.1 | pectate lyase | - |
| F6Y16_RS00410 () | 69174..70736 | + | 1563 | WP_000323161.1 | SLC13 family permease | - |
| F6Y16_RS00415 () | 70747..70854 | - | 108 | WP_001802312.1 | hypothetical protein | - |
| F6Y16_RS00420 () | 70926..71720 | - | 795 | WP_001177823.1 | prephenate dehydratase | - |
| F6Y16_RS00425 () | 71740..72816 | - | 1077 | WP_000897635.1 | nitric oxide synthase oxygenase | - |
| F6Y16_RS00430 () | 73000..74469 | + | 1470 | WP_000284431.1 | nicotinate phosphoribosyltransferase | - |
| F6Y16_RS00435 () | 74462..75283 | + | 822 | WP_000040873.1 | ammonia-dependent NAD(+) synthetase | - |
| F6Y16_RS00440 () | 75554..76156 | + | 603 | WP_000011542.1 | DUF2179 domain-containing protein | - |
| F6Y16_RS00445 () | 76137..76310 | + | 174 | WP_000669862.1 | NETI motif-containing protein | - |
| F6Y16_RS00450 () | 76602..76928 | - | 327 | WP_000434933.1 | staphostatin A | - |
| F6Y16_RS00455 () | 76959..78125 | - | 1167 | WP_000827748.1 | Staphopain A | VF |
| F6Y16_RS00465 () | 78986..80281 | + | 1296 | WP_000572878.1 | adenylosuccinate lyase | - |
| F6Y16_RS00470 () | 80390..80692 | + | 303 | WP_001165363.1 | hypothetical protein | - |
| F6Y16_RS00475 () | 80864..81556 | + | 693 | WP_000272070.1 | heptaprenylglyceryl phosphate synthase | - |
| F6Y16_RS00480 () | 81553..83745 | + | 2193 | WP_000992921.1 | DNA helicase PcrA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|