MGE detailed information
MGE type: Prophage MGE length: 57900 bp
Accession: NZ_AP019803 Location: 1572206..1630105 Organism: Escherichia coli strain KY 1497 Replicon: chromosome
Accession: NZ_AP019803 Location: 1572206..1630105 Organism: Escherichia coli strain KY 1497 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECKY1497_RS07390 (1568105) | 1568105..1569325 | + | 1221 | WP_021523109.1 | DNA-binding transcriptional repressor Mlc | - |
| ECKY1497_RS07395 (1569450) | 1569450..1570145 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| ECKY1497_RS07400 (1570098) | 1570098..1571390 | - | 1293 | WP_071593650.1 | voltage-gated ClC-type chloride channel ClcB | - |
| ECKY1497_RS07405 (1571549) | 1571549..1572163 | - | 615 | WP_001520571.1 | Tat proofreading chaperone DmsD | - |
| ECKY1497_RS07410 (1572206) | 1572206..1573060 | - | 855 | WP_020233477.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| ECKY1497_RS07415 (1573062) | 1573062..1573679 | - | 618 | WP_001520568.1 | dimethylsulfoxide reductase subunit B | - |
| ECKY1497_RS07420 (1573690) | 1573690..1576113 | - | 2424 | WP_072170800.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| ECKY1497_RS07425 (1576174) | 1576174..1578600 | - | 2427 | WP_248520454.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| ECKY1497_RS07430 (1578799) | 1578799..1579104 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| ECKY1497_RS07435 (1579212) | 1579212..1579922 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| ECKY1497_RS07440 (1579925) | 1579925..1580485 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| ECKY1497_RS07445 (1580520) | 1580520..1580861 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| ECKY1497_RS07450 (1580996) | 1580996..1581322 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| ECKY1497_RS07455 (1581528) | 1581528..1582742 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| ECKY1497_RS07460 (1582754) | 1582754..1583773 | + | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| ECKY1497_RS07465 (1583961) | 1583961..1585241 | - | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| ECKY1497_RS07470 (1585297) | 1585297..1586868 | - | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| ECKY1497_RS07475 (1586888) | 1586888..1587235 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| ECKY1497_RS07480 (1587235) | 1587235..1587912 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| ECKY1497_RS07485 (1587983) | 1587983..1588234 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| ECKY1497_RS07490 (1588307) | 1588307..1590778 | - | 2472 | WP_000048363.1 | exonuclease | - |
| ECKY1497_RS07495 (1590872) | 1590872..1591063 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| ECKY1497_RS07500 (1591060) | 1591060..1591248 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| ECKY1497_RS26355 (1592209) | 1592209..1592310 | - | 102 | Protein_1463 | protein YdfB | - |
| ECKY1497_RS07510 (1592312) | 1592312..1592467 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| ECKY1497_RS07515 (1592636) | 1592636..1593043 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| ECKY1497_RS07520 (1593124) | 1593124..1593351 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| ECKY1497_RS07525 (1593335) | 1593335..1593856 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| ECKY1497_RS07530 (1593837) | 1593837..1594802 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| ECKY1497_RS07535 (1594843) | 1594843..1595241 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| ECKY1497_RS07540 (1595444) | 1595444..1596109 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| ECKY1497_RS07545 (1596318) | 1596318..1596932 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| ECKY1497_RS07550 (1596935) | 1596935..1597957 | + | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| ECKY1497_RS07555 (1598462) | 1598462..1599532 | + | 1071 | Protein_1473 | ISNCY family transposase ISCARN112 | Transposase |
| ECKY1497_RS07560 (1599605) | 1599605..1599754 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| ECKY1497_RS07565 (1600191) | 1600191..1600523 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| ECKY1497_RS07570 (1600726) | 1600726..1601031 | - | 306 | WP_001326990.1 | protein YdfV | - |
| ECKY1497_RS07575 (1601056) | 1601056..1601295 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| ECKY1497_RS07580 (1601295) | 1601295..1601582 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| ECKY1497_RS07585 (1601654) | 1601654..1601809 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| ECKY1497_RS07590 (1602026) | 1602026..1602277 | + | 252 | WP_000980994.1 | protein Rem | - |
| ECKY1497_RS07595 (1602344) | 1602344..1602622 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| ECKY1497_RS07600 (1602624) | 1602624..1603673 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| ECKY1497_RS07605 (1603687) | 1603687..1604091 | + | 405 | Protein_1483 | antitermination protein | - |
| ECKY1497_RS07610 (1604148) | 1604148..1604845 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| ECKY1497_RS07615 (1604838) | 1604838..1605014 | + | 177 | WP_138069336.1 | cold-shock protein | - |
| ECKY1497_RS07620 (1605017) | 1605017..1605082 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| ECKY1497_RS07625 (1605087) | 1605087..1605317 | + | 231 | WP_000720962.1 | protein YnfN | - |
| ECKY1497_RS07630 (1605489) | 1605489..1605662 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| ECKY1497_RS07635 (1605814) | 1605814..1606224 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| ECKY1497_RS07640 (1606282) | 1606282..1606515 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| ECKY1497_RS07645 (1606904) | 1606904..1607449 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| ECKY1497_RS07650 (1607424) | 1607424..1609349 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| ECKY1497_RS07655 (1609346) | 1609346..1609552 | + | 207 | WP_000198149.1 | gpW family protein | - |
| ECKY1497_RS07660 (1609549) | 1609549..1611150 | + | 1602 | WP_001356819.1 | phage portal protein | - |
| ECKY1497_RS07665 (1611131) | 1611131..1612450 | + | 1320 | WP_020233915.1 | S49 family peptidase | - |
| ECKY1497_RS07670 (1612460) | 1612460..1612792 | + | 333 | WP_001708751.1 | head decoration protein | - |
| ECKY1497_RS07675 (1612847) | 1612847..1613872 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| ECKY1497_RS07680 (1613914) | 1613914..1614312 | + | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| ECKY1497_RS07685 (1614324) | 1614324..1614677 | + | 354 | WP_000752979.1 | head-tail joining protein | - |
| ECKY1497_RS07690 (1614689) | 1614689..1615267 | + | 579 | WP_033559746.1 | phage tail protein | - |
| ECKY1497_RS07695 (1615264) | 1615264..1615659 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| ECKY1497_RS07700 (1615667) | 1615667..1616407 | + | 741 | WP_001349920.1 | phage tail protein | - |
| ECKY1497_RS07705 (1616423) | 1616423..1616845 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| ECKY1497_RS07710 (1616827) | 1616827..1617261 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| ECKY1497_RS07715 (1617254) | 1617254..1619815 | + | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| ECKY1497_RS07720 (1619812) | 1619812..1620141 | + | 330 | WP_000847345.1 | phage tail protein | - |
| ECKY1497_RS07725 (1620141) | 1620141..1620839 | + | 699 | WP_001551186.1 | phage minor tail protein L | - |
| ECKY1497_RS07730 (1620845) | 1620845..1621588 | + | 744 | WP_032153655.1 | C40 family peptidase | - |
| ECKY1497_RS07735 (1621525) | 1621525..1622127 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| ECKY1497_RS07740 (1622188) | 1622188..1625667 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| ECKY1497_RS07745 (1625735) | 1625735..1626334 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| ECKY1497_RS07750 (1626399) | 1626399..1628774 | + | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| ECKY1497_RS07755 (1628774) | 1628774..1629055 | + | 282 | WP_000654155.1 | hypothetical protein | - |
| ECKY1497_RS07760 (1629065) | 1629065..1630105 | + | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| ECKY1497_RS07765 (1630148) | 1630148..1630441 | + | 294 | WP_001405873.1 | hypothetical protein | - |
| ECKY1497_RS07770 (1630711) | 1630711..1630897 | - | 187 | Protein_1516 | DinI-like family protein | - |
| ECKY1497_RS07775 (1630987) | 1630987..1631781 | - | 795 | WP_000354607.1 | hypothetical protein | - |
| ECKY1497_RS07780 (1632254) | 1632254..1633111 | - | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| ECKY1497_RS07785 (1633108) | 1633108..1633965 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| ECKY1497_RS07790 (1633962) | 1633962..1634789 | - | 828 | WP_033559630.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|