MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 133705 bp
Accession: NZ_AP019785 Location: 1..133705 Organism: Methylomagnum ishizawai strain RS11D-Pr Replicon: plasmid pRS11DPr2
Accession: NZ_AP019785 Location: 1..133705 Organism: Methylomagnum ishizawai strain RS11D-Pr Replicon: plasmid pRS11DPr2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5658_RS21730 (MishRS11D_43230) | 91..522 | - | 432 | WP_221067289.1 | IS200-IS605 family transposase ISPlu2 | Transposase |
| K5658_RS21735 (MishRS11D_43240) | 774..1973 | - | 1200 | WP_221067290.1 | NosD domain-containing protein | - |
| K5658_RS21740 | 2159..2311 | - | 153 | WP_221067291.1 | hypothetical protein | - |
| K5658_RS21745 (MishRS11D_43250) | 2368..2700 | + | 333 | WP_246628696.1 | ISAs1 family transposase ISXa1 | Transposase |
| K5658_RS23750 (MishRS11D_43260) | 2752..3249 | + | 498 | WP_246628679.1 | IS3 family transposase ISPpr7 | Transposase |
| K5658_RS21750 (MishRS11D_43270) | 3246..4328 | + | 1083 | WP_246628678.1 | IS3 family transposase ISPpr7 | Transposase |
| K5658_RS21755 (MishRS11D_43280) | 4387..4965 | + | 579 | WP_221063581.1 | IS66 family transposase ISDra8 | Transposase |
| K5658_RS21760 | 5174..5425 | + | 252 | WP_221063580.1 | hypothetical protein | - |
| K5658_RS23755 (MishRS11D_43290) | 5509..6705 | + | 1197 | WP_221066587.1 | transposase | - |
| K5658_RS21770 (MishRS11D_43300) | 6712..6915 | - | 204 | WP_221067292.1 | hypothetical protein | - |
| K5658_RS24040 | 6919..7044 | - | 126 | WP_281425991.1 | hypothetical protein | - |
| K5658_RS21775 (MishRS11D_43320) | 7204..10032 | - | 2829 | WP_221067293.1 | DUF748 domain-containing protein | - |
| K5658_RS21780 (MishRS11D_43330) | 10222..11229 | + | 1008 | WP_221067294.1 | mechanosensitive ion channel | - |
| K5658_RS21785 (MishRS11D_43340) | 11454..11807 | - | 354 | WP_221067295.1 | hypothetical protein | - |
| K5658_RS21790 (MishRS11D_43350) | 11804..12376 | - | 573 | WP_221067296.1 | hypothetical protein | - |
| K5658_RS21795 (MishRS11D_43370) | 12534..13910 | - | 1377 | WP_221067297.1 | DUF2254 domain-containing protein | - |
| K5658_RS21800 (MishRS11D_43380) | 14111..14479 | + | 369 | WP_221067298.1 | STAS/SEC14 domain-containing protein | - |
| K5658_RS21805 (MishRS11D_43390) | 14758..15930 | - | 1173 | WP_221067299.1 | cation:proton antiporter | - |
| K5658_RS21810 (MishRS11D_43400) | 16012..17409 | - | 1398 | WP_246628697.1 | H(+)/Cl(-) exchange transporter ClcA | - |
| K5658_RS21815 (MishRS11D_43410) | 17537..17866 | - | 330 | WP_221067300.1 | hypothetical protein | - |
| K5658_RS21820 (MishRS11D_43420) | 18017..21115 | - | 3099 | WP_221067301.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| K5658_RS21825 (MishRS11D_43430) | 21326..22714 | - | 1389 | WP_221067302.1 | sensor histidine kinase | - |
| K5658_RS21830 (MishRS11D_43440) | 22707..23381 | - | 675 | WP_221067303.1 | Transcriptional regulatory protein QseB | VF |
| K5658_RS21835 (MishRS11D_43450) | 23665..24954 | + | 1290 | WP_281425992.1 | OpgC domain-containing protein | - |
| K5658_RS21840 (MishRS11D_43460) | 25003..26238 | + | 1236 | WP_221067305.1 | cation:proton antiporter | - |
| K5658_RS21845 (MishRS11D_43470) | 26306..26476 | - | 171 | WP_221067343.1 | hypothetical protein | - |
| K5658_RS21850 (MishRS11D_43480) | 26579..27106 | + | 528 | WP_221067306.1 | hypothetical protein | - |
| K5658_RS21855 (MishRS11D_43490) | 27248..28681 | + | 1434 | WP_221067307.1 | glycosyl hydrolase | - |
| K5658_RS21860 (MishRS11D_43500) | 28710..30032 | + | 1323 | WP_221067308.1 | glucoamylase family protein | - |
| K5658_RS21865 (MishRS11D_43510) | 30090..31073 | + | 984 | WP_221067309.1 | SDR family oxidoreductase | - |
| K5658_RS21870 (MishRS11D_43520) | 31078..31485 | - | 408 | WP_221067310.1 | hypothetical protein | - |
| K5658_RS21875 (MishRS11D_43530) | 31482..31868 | - | 387 | WP_221067311.1 | sensory rhodopsin transducer | - |
| K5658_RS21880 (MishRS11D_43540) | 31942..32607 | - | 666 | Protein_33 | DUF4396 domain-containing protein | - |
| K5658_RS21885 (MishRS11D_43550) | 32679..33872 | - | 1194 | WP_221067312.1 | cation:proton antiporter | - |
| K5658_RS21890 (MishRS11D_43560) | 33921..35024 | - | 1104 | WP_221067313.1 | AI-2E family transporter | - |
| K5658_RS21895 (MishRS11D_43570) | 35446..35925 | - | 480 | WP_221067314.1 | nuclear transport factor 2 family protein | - |
| K5658_RS21900 (MishRS11D_43580) | 35976..36572 | - | 597 | WP_221067315.1 | glutathione S-transferase | - |
| K5658_RS21905 (MishRS11D_43590) | 36628..37287 | - | 660 | WP_221067316.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| K5658_RS21910 (MishRS11D_43600) | 37395..37949 | - | 555 | WP_221067317.1 | carboxymuconolactone decarboxylase family protein | - |
| K5658_RS21915 (MishRS11D_43610) | 38175..39074 | + | 900 | WP_221067318.1 | HTH-type transcriptional regulator DmlR | VF |
| K5658_RS21920 (MishRS11D_43620) | 39104..40999 | - | 1896 | WP_221067319.1 | DNA-binding transcriptional activator HyfR | VF |
| K5658_RS21925 (MishRS11D_43630) | 41265..41540 | + | 276 | WP_221067320.1 | DUF2282 domain-containing protein | - |
| K5658_RS21930 (MishRS11D_43640) | 41540..42427 | + | 888 | WP_221067321.1 | DUF692 domain-containing protein | - |
| K5658_RS21935 (MishRS11D_43650) | 42411..43199 | + | 789 | WP_221067322.1 | DNA-binding domain-containing protein | - |
| K5658_RS21940 (MishRS11D_43660) | 43196..43678 | + | 483 | WP_221067323.1 | DoxX family protein | - |
| K5658_RS21945 (MishRS11D_43670) | 43696..44367 | + | 672 | WP_221067324.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| K5658_RS21950 (MishRS11D_43680) | 44575..44952 | - | 378 | WP_281425993.1 | IS66 family transposase ISAzo15 | Transposase |
| K5658_RS21955 (MishRS11D_43690) | 44952..45197 | - | 246 | WP_221067325.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| K5658_RS21960 (MishRS11D_43700) | 45442..45684 | + | 243 | WP_221067326.1 | ISAs1 family transposase ISChth1 | Transposase |
| K5658_RS21965 (MishRS11D_43710) | 45929..46129 | - | 201 | WP_221067327.1 | hypothetical protein | - |
| K5658_RS21970 (MishRS11D_43720) | 46173..47543 | - | 1371 | WP_246628698.1 | transposase | - |
| K5658_RS21975 (MishRS11D_43730) | 47649..48929 | + | 1281 | WP_246628699.1 | Cell division protein PomZ | VF |
| K5658_RS21980 (MishRS11D_43740) | 48931..49947 | + | 1017 | WP_221067328.1 | ParB/RepB/Spo0J family partition protein | - |
| K5658_RS21985 (MishRS11D_43750) | 50880..51503 | + | 624 | WP_221067329.1 | isochorismate family cysteine hydrolase YcaC | - |
| K5658_RS21990 (MishRS11D_43760) | 51740..53566 | + | 1827 | Protein_55 | amidohydrolase family protein | - |
| K5658_RS21995 | 53709..54272 | + | 564 | WP_246628701.1 | hypothetical protein | - |
| K5658_RS22000 (MishRS11D_43770) | 54284..54694 | + | 411 | WP_221067330.1 | lipocalin-like domain-containing protein | - |
| K5658_RS22005 (MishRS11D_43790) | 54979..55737 | - | 759 | WP_221067331.1 | slipin family protein | - |
| K5658_RS22010 (MishRS11D_43800) | 55741..57048 | - | 1308 | WP_246628700.1 | nodulation protein NfeD | - |
| K5658_RS22015 (MishRS11D_43820) | 58005..58490 | + | 486 | WP_221067333.1 | transposase family protein | - |
| K5658_RS22020 (MishRS11D_43830) | 58520..58900 | + | 381 | WP_221063574.1 | IS5 family transposase ISRfsp3 | Transposase |
| K5658_RS22025 (MishRS11D_43840) | 59557..60717 | + | 1161 | WP_221063449.1 | IS4 family transposase ISPa45 | Transposase |
| K5658_RS22030 (MishRS11D_43850) | 60872..61810 | + | 939 | Protein_63 | IS1595 family transposase ISVasp5 | Transposase |
| K5658_RS22035 (MishRS11D_43860) | 61994..63751 | - | 1758 | WP_221067334.1 | choice-of-anchor Q domain-containing protein | - |
| K5658_RS22040 (MishRS11D_43870) | 63923..64393 | - | 471 | WP_221067335.1 | hypothetical protein | - |
| K5658_RS23760 (MishRS11D_43880) | 64535..65032 | + | 498 | WP_246628679.1 | IS3 family transposase ISPpr7 | Transposase |
| K5658_RS22045 (MishRS11D_43890) | 65029..66111 | + | 1083 | WP_246628678.1 | IS3 family transposase ISPpr7 | Transposase |
| K5658_RS22050 (MishRS11D_43900) | 66084..67205 | - | 1122 | WP_221067336.1 | YncE family protein | - |
| K5658_RS22055 (MishRS11D_43910) | 67637..68908 | - | 1272 | WP_221067245.1 | DUF4010 domain-containing protein | - |
| K5658_RS22060 (MishRS11D_43920) | 69196..70230 | + | 1035 | WP_221067246.1 | glycoside hydrolase | - |
| K5658_RS23765 (MishRS11D_43930) | 70336..70965 | - | 630 | WP_246628691.1 | hypothetical protein | - |
| K5658_RS22070 | 71792..72010 | - | 219 | WP_221067248.1 | ISNCY family transposase ISAtsp9 | Transposase |
| K5658_RS22075 (MishRS11D_43950) | 73030..74278 | + | 1249 | Protein_73 | group II intron reverse transcriptase/maturase | - |
| K5658_RS22080 | 74323..75884 | - | 1562 | Protein_74 | IS3 family transposase | - |
| K5658_RS23770 | 76030..76242 | + | 213 | Protein_75 | ISNCY family transposase ISAcif1 | Transposase |
| K5658_RS22085 (MishRS11D_44000) | 76283..78541 | - | 2259 | WP_221067249.1 | hypothetical protein | - |
| K5658_RS23775 (MishRS11D_44010) | 78998..79378 | - | 381 | WP_221063574.1 | IS5 family transposase ISRfsp3 | Transposase |
| K5658_RS23780 (MishRS11D_44020) | 79408..79893 | - | 486 | WP_221064728.1 | transposase family protein | - |
| K5658_RS22095 (MishRS11D_44030) | 79981..81309 | - | 1329 | WP_221063785.1 | IS4 family transposase ISRso13 | Transposase |
| K5658_RS22100 (MishRS11D_44040) | 81430..81663 | + | 234 | WP_221067250.1 | hypothetical protein | - |
| K5658_RS22105 (MishRS11D_44050) | 81771..82196 | + | 426 | WP_221067251.1 | hypothetical protein | - |
| K5658_RS22110 (MishRS11D_44060) | 82243..82725 | + | 483 | WP_221067252.1 | PHB depolymerase family esterase | - |
| K5658_RS22115 (MishRS11D_44070) | 82784..83401 | + | 618 | WP_221067253.1 | LemA family protein | - |
| K5658_RS24045 (MishRS11D_44080) | 83450..84280 | + | 831 | WP_221067254.1 | TPM domain-containing protein | - |
| K5658_RS22125 (MishRS11D_44090) | 84280..84789 | + | 510 | WP_221067255.1 | TPM domain-containing protein | - |
| K5658_RS22130 (MishRS11D_44100) | 85151..86206 | - | 1056 | WP_221067256.1 | IS4 family transposase ISMmg3 | Transposase |
| K5658_RS22135 (MishRS11D_44110) | 86305..86631 | + | 327 | WP_221067257.1 | hypothetical protein | - |
| K5658_RS22140 (MishRS11D_44120) | 86828..87853 | - | 1026 | WP_221067258.1 | replication protein | - |
| K5658_RS22145 (MishRS11D_44130) | 88172..89086 | - | 915 | WP_221067259.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| K5658_RS22150 (MishRS11D_44140) | 89083..89682 | - | 600 | WP_221067260.1 | AbiEi antitoxin N-terminal domain-containing protein | Antitoxin Detail |
| K5658_RS22155 (MishRS11D_44150) | 90171..90998 | + | 828 | WP_221067261.1 | IS5 family transposase ISMac11 | Transposase |
| K5658_RS22160 (MishRS11D_44160) | 91023..91619 | - | 597 | WP_221067262.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| K5658_RS22165 (MishRS11D_44170) | 91805..92539 | - | 735 | WP_246628692.1 | ISAzo13 family transposase ISCap1 | Transposase |
| K5658_RS22170 (MishRS11D_44180) | 92640..92915 | + | 276 | WP_221067263.1 | acyl carrier protein | - |
| K5658_RS22175 (MishRS11D_44190) | 93119..94183 | + | 1065 | WP_221067264.1 | TauD/TfdA family dioxygenase | - |
| K5658_RS22180 (MishRS11D_44200) | 94252..95319 | + | 1068 | WP_221067265.1 | hypothetical protein | - |
| K5658_RS22185 (MishRS11D_44210) | 95376..101432 | + | 6057 | WP_221067266.1 | Dimodular nonribosomal peptide synthase | VF |
| K5658_RS22190 (MishRS11D_44220) | 101593..101805 | - | 213 | WP_221067267.1 | hypothetical protein | - |
| K5658_RS22195 (MishRS11D_44230) | 101833..102915 | - | 1083 | WP_246628678.1 | IS3 family transposase ISPpr7 | Transposase |
| K5658_RS23790 (MishRS11D_44240) | 102912..103409 | - | 498 | WP_246628679.1 | IS3 family transposase ISPpr7 | Transposase |
| K5658_RS23795 | 103672..103830 | + | 159 | Protein_101 | IS3 family transposase ISAfe17 | Transposase |
| K5658_RS23800 | 103845..104726 | - | 882 | Protein_102 | IS3 family transposase | - |
| K5658_RS22210 | 104762..104899 | + | 138 | WP_221067269.1 | hypothetical protein | - |
| K5658_RS22215 (MishRS11D_44270) | 105000..106826 | + | 1827 | WP_221067270.1 | Heterocyst differentiation ATP-binding protein HepA | VF |
| K5658_RS22220 (MishRS11D_44280) | 106823..107725 | + | 903 | WP_221067271.1 | glycosyltransferase | - |
| K5658_RS22225 (MishRS11D_44290) | 107749..108639 | + | 891 | WP_221067272.1 | Chondroitin synthase | VF |
| K5658_RS22230 (MishRS11D_44300) | 108667..109419 | + | 753 | WP_221067273.1 | glycosyltransferase family 25 protein | - |
| K5658_RS22235 (MishRS11D_44310) | 109437..110213 | - | 777 | WP_221067274.1 | glycosyltransferase family 25 protein | - |
| K5658_RS22240 (MishRS11D_44320) | 110348..111172 | - | 825 | WP_221067275.1 | hypothetical protein | - |
| K5658_RS22245 (MishRS11D_44330) | 111207..111989 | - | 783 | WP_221067276.1 | glycosyltransferase family 25 protein | - |
| K5658_RS22250 (MishRS11D_44340) | 111986..113470 | - | 1485 | WP_221067277.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| K5658_RS22255 (MishRS11D_44350) | 113527..114531 | - | 1005 | WP_221067278.1 | glycosyltransferase | - |
| K5658_RS22260 (MishRS11D_44370) | 115115..115942 | + | 828 | WP_221063606.1 | IS5 family transposase ISMac11 | Transposase |
| K5658_RS22265 (MishRS11D_44380) | 116006..116554 | + | 549 | WP_221063835.1 | IS630 family transposase ISAcma32 | Transposase |
| K5658_RS22270 (MishRS11D_44390) | 116575..116997 | + | 423 | WP_246628702.1 | IS630 family transposase ISAcma32 | Transposase |
| K5658_RS22275 (MishRS11D_44400) | 117811..118638 | - | 828 | WP_221063606.1 | IS5 family transposase ISMac11 | Transposase |
| K5658_RS22280 (MishRS11D_44410) | 118792..119565 | - | 774 | WP_221067279.1 | hypothetical protein | - |
| K5658_RS22285 (MishRS11D_44420) | 120187..121515 | - | 1329 | WP_221065052.1 | IS4 family transposase ISRso13 | Transposase |
| K5658_RS22290 (MishRS11D_44430) | 121797..122051 | + | 255 | Protein_119 | ECF RNA polymerase sigma-E factor | VF |
| K5658_RS22295 (MishRS11D_44440) | 122077..122376 | - | 300 | Protein_120 | ISNCY family transposase ISAcif1 | Transposase |
| K5658_RS22300 (MishRS11D_44450) | 122453..123703 | - | 1251 | WP_221067282.1 | group II intron reverse transcriptase/maturase | - |
| K5658_RS22305 (MishRS11D_44460) | 123700..125298 | - | 1599 | WP_221067283.1 | ISNCY family transposase ISAtsp9 | Transposase |
| K5658_RS22310 (MishRS11D_44470) | 125327..125695 | + | 369 | WP_221067284.1 | ECF RNA polymerase sigma-E factor | VF |
| K5658_RS22315 (MishRS11D_44490) | 125869..127170 | + | 1302 | WP_221067285.1 | cation:proton antiporter | - |
| K5658_RS22320 (MishRS11D_44500) | 127602..127886 | + | 285 | WP_221067286.1 | RNA-binding protein | - |
| K5658_RS23805 (MishRS11D_44510) | 128066..128437 | + | 372 | WP_246628561.1 | IS5 family transposase ISMac15 | Transposase |
| K5658_RS23810 (MishRS11D_44520) | 128416..128829 | + | 414 | WP_246628703.1 | IS5 family transposase ISMac15 | Transposase |
| K5658_RS22330 (MishRS11D_44530) | 129127..129516 | + | 390 | WP_221067287.1 | hypothetical protein | - |
| K5658_RS22335 (MishRS11D_44540) | 129581..130837 | + | 1257 | WP_221067288.1 | PHB depolymerase family esterase | - |
| K5658_RS22340 (MishRS11D_44550) | 130736..131320 | - | 585 | WP_246628693.1 | putative ribonucleotide transport ATP-binding protein mkl | VF |
| K5658_RS22345 (MishRS11D_44560) | 131343..132407 | - | 1065 | WP_246628694.1 | MlaE family lipid ABC transporter permease subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|