MGE detailed information
MGE type: Prophage MGE length: 95793 bp
Accession: NZ_AP019761 Location: 1635480..1731272 Organism: Escherichia coli O111:H- strain 110512 Replicon: chromosome
Accession: NZ_AP019761 Location: 1635480..1731272 Organism: Escherichia coli O111:H- strain 110512 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC110512_RS08310 () | 1630986..1632512 | - | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| EC110512_RS08315 () | 1632549..1633994 | - | 1446 | WP_001156467.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| EC110512_RS08320 () | 1633994..1635304 | - | 1311 | WP_000444949.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| EC110512_RS08325 () | 1635480..1636388 | + | 909 | WP_000885466.1 | LysR family transcriptional regulator | - |
| EC110512_RS08330 () | 1636718..1637281 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| EC110512_RS08335 () | 1637302..1638534 | - | 1233 | WP_000628065.1 | diguanylate cyclase DgcM | - |
| EC110512_RS08340 () | 1638789..1639772 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| EC110512_RS08345 () | 1640250..1641623 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| EC110512_RS08350 () | 1641752..1642687 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| EC110512_RS08355 () | 1642739..1643974 | - | 1236 | WP_000040839.1 | site-specific integrase | - |
| EC110512_RS08360 () | 1643976..1644191 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| EC110512_RS08365 () | 1644291..1644479 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1644295..1644473 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1644295..1644473 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1644295..1644473 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1644295..1644473 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| EC110512_RS08370 () | 1644517..1644666 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| EC110512_RS08375 () | 1644722..1645531 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| EC110512_RS08380 () | 1645524..1648124 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| EC110512_RS08385 () | 1648226..1648501 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| EC110512_RS08390 () | 1648576..1648746 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| EC110512_RS08395 () | 1648746..1648967 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| EC110512_RS08400 () | 1649409..1649897 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| EC110512_RS08405 () | 1649894..1650049 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| EC110512_RS08410 () | 1650060..1650239 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| EC110512_RS08420 () | 1650482..1650901 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| EC110512_RS08425 () | 1650981..1651235 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| EC110512_RS08430 () | 1651232..1651654 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| EC110512_RS08435 () | 1651732..1652520 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| EC110512_RS08440 () | 1652527..1653273 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| EC110512_RS08445 () | 1653296..1654057 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| EC110512_RS08450 () | 1654073..1654495 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| EC110512_RS08455 () | 1654601..1654813 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| EC110512_RS08460 () | 1654846..1655063 | + | 218 | Protein_1610 | DUF4014 family protein | - |
| EC110512_RS08465 () | 1655065..1655328 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| EC110512_RS08470 () | 1655339..1655500 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| EC110512_RS08475 () | 1655579..1655824 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| EC110512_RS08480 () | 1656256..1657407 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| EC110512_RS08485 () | 1657375..1658364 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| EC110512_RS08490 () | 1658364..1659755 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| EC110512_RS08495 () | 1660255..1660854 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| EC110512_RS08500 () | 1660854..1661144 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| EC110512_RS08505 () | 1661141..1661695 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| EC110512_RS08520 () | 1662257..1662688 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| EC110512_RS08525 () | 1662685..1662940 | + | 256 | Protein_1621 | DUF3927 family protein | - |
| EC110512_RS08530 () | 1663259..1665112 | + | 1854 | WP_106914131.1 | SASA family carbohydrate esterase | - |
| EC110512_RS08535 () | 1665262..1665477 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| EC110512_RS08540 () | 1665482..1665826 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| EC110512_RS08545 () | 1665877..1666410 | + | 534 | WP_000992086.1 | lysozyme | - |
| EC110512_RS08550 () | 1666684..1667223 | + | 540 | WP_001344811.1 | phage antirepressor KilAC domain-containing protein | - |
| EC110512_RS08560 () | 1668516..1668692 | + | 177 | WP_000285960.1 | phage antirepressor KilAC domain-containing protein | - |
| EC110512_RS08565 () | 1668787..1668918 | + | 132 | WP_001280923.1 | hypothetical protein | - |
| EC110512_RS08575 () | 1669141..1669326 | + | 186 | WP_012817877.1 | Rz1 family lipoprotein | - |
| EC110512_RS08590 () | 1669727..1670053 | + | 327 | WP_000828070.1 | TonB family protein | - |
| EC110512_RS08595 () | 1670185..1670385 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| EC110512_RS08600 () | 1670427..1670792 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| EC110512_RS08605 () | 1671081..1671644 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| EC110512_RS08610 () | 1671641..1673302 | + | 1662 | WP_001411753.1 | terminase large subunit | - |
| EC110512_RS08615 () | 1673366..1675303 | + | 1938 | WP_000173011.1 | phage major capsid protein | - |
| EC110512_RS08620 () | 1675348..1675569 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| EC110512_RS08625 () | 1675515..1677937 | + | 2423 | Protein_1638 | phage portal protein | - |
| EC110512_RS08630 () | 1677934..1678260 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| EC110512_RS08635 () | 1678270..1678620 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| EC110512_RS08640 () | 1678617..1679063 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| EC110512_RS08645 () | 1679060..1679404 | + | 345 | WP_000133393.1 | DUF3168 domain-containing protein | - |
| EC110512_RS08650 () | 1679473..1680189 | + | 717 | WP_001275480.1 | immunoglobulin domain-containing protein | - |
| EC110512_RS08655 () | 1680195..1680569 | + | 375 | WP_001030060.1 | phage tail assembly chaperone | - |
| EC110512_RS08660 () | 1680665..1680874 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| EC110512_RS08665 () | 1680926..1684168 | + | 3243 | WP_000212770.1 | phage tail tape measure protein | - |
| EC110512_RS08670 () | 1684161..1684502 | + | 342 | WP_000807964.1 | phage tail protein | - |
| EC110512_RS08675 () | 1684502..1685200 | + | 699 | WP_001152159.1 | phage minor tail protein L | - |
| EC110512_RS08680 () | 1685211..1685954 | + | 744 | WP_000194763.1 | C40 family peptidase | - |
| EC110512_RS08685 () | 1685900..1686532 | + | 633 | WP_064732755.1 | tail assembly protein | - |
| EC110512_RS08695 () | 1686723..1687250 | - | 528 | WP_000649829.1 | superoxide dismutase family protein | - |
| EC110512_RS08700 () | 1687384..1690857 | + | 3474 | WP_146868604.1 | host specificity protein J | - |
| EC110512_RS08705 () | 1690925..1691524 | + | 600 | WP_001228290.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| EC110512_RS08710 () | 1691676..1692980 | + | 1305 | WP_000216548.1 | phage tail protein | - |
| EC110512_RS08715 () | 1692982..1693251 | + | 270 | WP_001023476.1 | phage tail fiber C-terminal domain-containing protein | - |
| EC110512_RS08720 () | 1693364..1693764 | + | 401 | Protein_1656 | T3SS effector NleG family protein | - |
| EC110512_RS08725 () | 1693744..1694343 | - | 600 | Protein_1657 | tyrosine-type recombinase/integrase | - |
| EC110512_RS08730 () | 1694366..1694488 | + | 123 | WP_106409364.1 | phage tail fiber C-terminal domain-containing protein | - |
| EC110512_RS08735 () | 1694595..1695506 | + | 912 | WP_000950979.1 | type III secretion system effector kinase NleH1-2 | - |
| EC110512_RS08740 () | 1695572..1696011 | + | 440 | Protein_1660 | T3SS effector caspase inhibitor NleF | - |
| EC110512_RS08755 () | 1697319..1697806 | - | 488 | Protein_1662 | transposase | - |
| EC110512_RS08760 () | 1698293..1698571 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| EC110512_RS08765 () | 1698999..1699145 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| EC110512_RS08770 () | 1699282..1699929 | - | 648 | WP_001303944.1 | T3SS effector E3 ubiquitin-protein ligase NleG | - |
| EC110512_RS08775 () | 1700113..1700703 | + | 591 | WP_001144879.1 | T3SS effector guanine nucleotide exchange factor EspM1 | - |
| EC110512_RS08780 () | 1700922..1701978 | - | 1057 | Protein_1667 | IS630 family transposase | - |
| EC110512_RS08785 () | 1702210..1702860 | + | 651 | WP_001345079.1 | DUF1076 domain-containing protein | - |
| EC110512_RS08790 () | 1703031..1703266 | + | 236 | Protein_1669 | IS3 family transposase | - |
| EC110512_RS08795 () | 1703209..1703562 | - | 354 | WP_001261191.1 | recombinase family protein | - |
| EC110512_RS08800 () | 1703653..1704372 | + | 720 | WP_000171274.1 | TonB system transport protein TonB | - |
| EC110512_RS08805 () | 1704412..1704810 | - | 399 | WP_112033818.1 | acyl-CoA thioester hydrolase YciA | - |
| EC110512_RS08810 () | 1704915..1705454 | - | 540 | WP_000808667.1 | septation protein A | - |
| EC110512_RS08815 () | 1705484..1706227 | - | 744 | WP_000028550.1 | envelope biogenesis factor ElyC | - |
| EC110512_RS08820 () | 1706255..1706344 | - | 90 | Protein_1675 | YkgJ family cysteine cluster protein | - |
| EC110512_RS08825 () | 1706584..1707222 | + | 639 | WP_000737224.1 | outer membrane protein OmpW | - |
| EC110512_RS08830 () | 1707268..1708398 | - | 1131 | WP_000113674.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| EC110512_RS08835 () | 1708376..1708624 | - | 249 | WP_000113189.1 | excisionase | - |
| EC110512_RS08840 () | 1708689..1711160 | - | 2472 | WP_000048484.1 | exonuclease | - |
| EC110512_RS08845 () | 1711256..1711444 | - | 189 | WP_000199480.1 | DUF1482 family protein | - |
| EC110512_RS08850 () | 1711441..1711629 | - | 189 | WP_000449172.1 | cell division inhibitor | - |
| EC110512_RS08860 () | 1712190..1712423 | + | 234 | WP_000920491.1 | hypothetical protein | - |
| EC110512_RS08865 () | 1712401..1712808 | - | 408 | WP_000394552.1 | hypothetical protein | - |
| EC110512_RS08870 () | 1712831..1713049 | - | 219 | WP_001171894.1 | hypothetical protein | - |
| EC110512_RS08875 () | 1713122..1713421 | - | 300 | WP_001240336.1 | hypothetical protein | - |
| EC110512_RS08885 () | 1713686..1714093 | - | 408 | WP_000787428.1 | helix-turn-helix domain-containing protein | - |
| EC110512_RS08890 () | 1714170..1714396 | + | 227 | Protein_1687 | transcriptional regulator | - |
| EC110512_RS08895 () | 1714380..1714931 | + | 552 | WP_000705622.1 | hypothetical protein | - |
| EC110512_RS08900 () | 1714903..1715943 | + | 1041 | WP_000020556.1 | DNA-binding protein | - |
| EC110512_RS08905 () | 1715855..1716397 | + | 543 | WP_157825328.1 | replication protein | - |
| EC110512_RS08910 () | 1716431..1717165 | + | 735 | WP_000450683.1 | DUF1627 domain-containing protein | - |
| EC110512_RS08915 () | 1717162..1717326 | + | 165 | WP_001505071.1 | hypothetical protein | - |
| EC110512_RS08925 () | 1718025..1718783 | + | 759 | WP_001449026.1 | AcfC family adhesin Paa | - |
| EC110512_RS08930 () | 1719119..1719274 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EC110512_RS08935 () | 1719495..1719752 | + | 258 | WP_001217394.1 | hypothetical protein | - |
| EC110512_RS08940 () | 1719822..1720100 | + | 279 | WP_032178572.1 | hypothetical protein | - |
| EC110512_RS08945 () | 1720102..1721157 | + | 1056 | WP_001265289.1 | DUF968 domain-containing protein | - |
| EC110512_RS08950 () | 1721158..1721523 | + | 366 | WP_000140002.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EC110512_RS08955 () | 1721520..1722209 | + | 690 | WP_001059384.1 | antiterminator | - |
| EC110512_RS08975 () | 1722828..1723256 | + | 429 | Protein_1700 | tellurite resistance TerB family protein | - |
| EC110512_RS08980 () | 1723253..1723508 | + | 256 | Protein_1701 | DUF3927 family protein | - |
| EC110512_RS08985 () | 1723735..1725501 | + | 1767 | Protein_1702 | DUF1737 domain-containing protein | - |
| EC110512_RS08990 () | 1725556..1726769 | + | 1214 | WP_162829202.1 | IS3 family transposase | - |
| EC110512_RS09000 () | 1726859..1727128 | + | 270 | WP_001023452.1 | phage tail fiber C-terminal domain-containing protein | - |
| EC110512_RS09005 () | 1727269..1728144 | + | 876 | WP_000491542.1 | hypothetical protein | - |
| EC110512_RS09015 () | 1728369..1729019 | - | 651 | WP_001121225.1 | type III secretion system effector NleG7 | - |
| EC110512_RS09020 () | 1729023..1729289 | - | 267 | Protein_1707 | hypothetical protein | - |
| EC110512_RS28790 () | 1729347..1729496 | - | 150 | WP_001345374.1 | hypothetical protein | - |
| EC110512_RS09025 () | 1729615..1729857 | - | 243 | WP_012817881.1 | DinI-like family protein | - |
| EC110512_RS09030 () | 1729989..1731272 | + | 1284 | Protein_1710 | MHS family MFS transporter YdfJ | - |
| EC110512_RS09035 () | 1731361..1732821 | + | 1461 | WP_000527750.1 | mannitol dehydrogenase family protein | - |
| EC110512_RS09040 () | 1732857..1733060 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EC110512_RS09045 () | 1733238..1733924 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EC110512_RS09050 () | 1734013..1734759 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|