MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 69474 bp
Accession: NZ_AP019695 Location: 327525..396998 Organism: Amedibacterium intestinale strain N6H1-5 Replicon: chromosome
Accession: NZ_AP019695 Location: 327525..396998 Organism: Amedibacterium intestinale strain N6H1-5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aargi30884_RS01685 () | 323126..323452 | + | 327 | WP_115714631.1 | hypothetical protein | - |
| Aargi30884_RS01690 () | 323534..323749 | + | 216 | WP_115714632.1 | YneF family protein | - |
| Aargi30884_RS01695 () | 323850..324542 | + | 693 | WP_115714633.1 | transglycosylase domain-containing protein | - |
| Aargi30884_RS01705 () | 325181..325465 | + | 285 | WP_115714634.1 | hypothetical protein | - |
| Aargi30884_RS01710 () | 325536..325751 | + | 216 | WP_115714635.1 | hypothetical protein | - |
| Aargi30884_RS01715 () | 325763..326368 | + | 606 | WP_163051345.1 | hypothetical protein | - |
| Aargi30884_RS01720 () | 326358..327905 | + | 1548 | WP_115714637.1 | hypothetical protein | - |
| Aargi30884_RS01725 () | 327956..328255 | + | 300 | WP_115714638.1 | hypothetical protein | - |
| Aargi30884_RS01730 () | 328598..328777 | + | 180 | WP_115714639.1 | hypothetical protein | - |
| Aargi30884_RS01735 () | 328799..328969 | + | 171 | WP_157964917.1 | hypothetical protein | - |
| Aargi30884_RS01740 () | 329012..329809 | + | 798 | WP_163051347.1 | Iron-sulfur cluster carrier protein | VF |
| Aargi30884_RS01745 () | 329799..330716 | + | 918 | WP_163051349.1 | ParB/RepB/Spo0J family partition protein | - |
| Aargi30884_RS01750 () | 330759..331280 | + | 522 | WP_163051351.1 | hypothetical protein | - |
| Aargi30884_RS01755 () | 331273..331566 | + | 294 | WP_115714643.1 | single-stranded DNA-binding protein | - |
| Aargi30884_RS01760 () | 331828..332061 | + | 234 | WP_147360222.1 | hypothetical protein | - |
| Aargi30884_RS01765 () | 332054..332335 | + | 282 | WP_115714645.1 | hypothetical protein | - |
| Aargi30884_RS01770 () | 332337..332768 | + | 432 | WP_115714646.1 | hypothetical protein | - |
| Aargi30884_RS01775 () | 333133..333771 | - | 639 | WP_115714648.1 | hypothetical protein | - |
| Aargi30884_RS01780 () | 333821..334063 | + | 243 | WP_115714649.1 | helix-turn-helix domain-containing protein | - |
| Aargi30884_RS01785 () | 334386..334754 | + | 369 | WP_115714651.1 | hypothetical protein | - |
| Aargi30884_RS01790 () | 334799..335131 | + | 333 | WP_115714652.1 | hypothetical protein | - |
| Aargi30884_RS01795 () | 335128..336081 | + | 954 | WP_163051353.1 | DUF5011 domain-containing protein | - |
| Aargi30884_RS01800 () | 336364..336582 | + | 219 | WP_115714654.1 | CopG family transcriptional regulator | Antitoxin Detail |
| Aargi30884_RS01805 () | 336582..336854 | + | 273 | WP_174766916.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| Aargi30884_RS01810 () | 337048..343392 | + | 6345 | WP_163051355.1 | Cys-Gln thioester bond-forming surface protein | - |
| Aargi30884_RS01815 () | 343379..344008 | + | 630 | WP_115714657.1 | hypothetical protein | - |
| Aargi30884_RS01820 () | 344072..344887 | + | 816 | WP_163051357.1 | hypothetical protein | - |
| Aargi30884_RS01825 () | 344884..345036 | + | 153 | WP_157964919.1 | hypothetical protein | - |
| Aargi30884_RS01830 () | 345043..346914 | + | 1872 | WP_115714660.1 | DNA primase | - |
| Aargi30884_RS01835 () | 346956..347312 | + | 357 | WP_115714661.1 | hypothetical protein | - |
| Aargi30884_RS01840 () | 347316..348116 | + | 801 | WP_115714662.1 | hypothetical protein | - |
| Aargi30884_RS01845 () | 348126..350876 | + | 2751 | WP_163051359.1 | ATP-binding protein | - |
| Aargi30884_RS01850 () | 350873..352663 | + | 1791 | WP_163051361.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| Aargi30884_RS01855 () | 352681..353211 | + | 531 | WP_115714665.1 | hypothetical protein | - |
| Aargi30884_RS01860 () | 353279..353686 | + | 408 | WP_163051363.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| Aargi30884_RS01865 () | 353643..353873 | + | 231 | WP_163051365.1 | hypothetical protein | - |
| Aargi30884_RS01870 () | 353886..354764 | + | 879 | WP_163051367.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| Aargi30884_RS01875 () | 354797..354973 | + | 177 | WP_157964920.1 | hypothetical protein | - |
| Aargi30884_RS01880 () | 354927..356171 | + | 1245 | WP_163051369.1 | DUF1738 domain-containing protein | - |
| Aargi30884_RS01885 () | 356453..356893 | - | 441 | WP_115714669.1 | hypothetical protein | - |
| Aargi30884_RS01890 () | 357071..357562 | + | 492 | WP_163051371.1 | hypothetical protein | - |
| Aargi30884_RS01895 () | 357565..359265 | + | 1701 | WP_163051373.1 | hypothetical protein | - |
| Aargi30884_RS01900 () | 359262..361229 | + | 1968 | WP_163051375.1 | type IV secretory system conjugative DNA transfer family protein | - |
| Aargi30884_RS01905 () | 361231..362046 | + | 816 | WP_115714673.1 | hypothetical protein | - |
| Aargi30884_RS01910 () | 362274..362615 | + | 342 | WP_163051377.1 | hypothetical protein | - |
| Aargi30884_RS01915 () | 362874..363014 | + | 141 | WP_163051379.1 | hypothetical protein | - |
| Aargi30884_RS01920 () | 363007..364629 | + | 1623 | WP_163051381.1 | hypothetical protein ; Integrase | Integrase |
| Aargi30884_RS01925 () | 365045..365215 | + | 171 | WP_115715330.1 | hypothetical protein | - |
| Aargi30884_RS01945 () | 370371..371531 | + | 1161 | WP_163051383.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| Aargi30884_RS01950 () | 371599..372228 | + | 630 | WP_163051385.1 | CPBP family intramembrane metalloprotease | - |
| Aargi30884_RS01955 () | 372241..374406 | + | 2166 | WP_163051387.1 | ATP-dependent RecD-like DNA helicase | - |
| Aargi30884_RS15175 () | 374454..374630 | + | 177 | WP_164503359.1 | hypothetical protein | - |
| Aargi30884_RS01960 () | 374652..375743 | + | 1092 | WP_115714683.1 | AI-2E family transporter | - |
| Aargi30884_RS01965 () | 376017..378641 | + | 2625 | WP_174766917.1 | alanine--tRNA ligase | - |
| Aargi30884_RS01970 () | 378702..378962 | + | 261 | WP_115714685.1 | IreB family regulatory phosphoprotein | - |
| Aargi30884_RS01975 () | 378959..379372 | + | 414 | WP_115714686.1 | Holliday junction resolvase RuvX | - |
| Aargi30884_RS01980 () | 379407..379658 | + | 252 | WP_115714687.1 | DUF1292 domain-containing protein | - |
| Aargi30884_RS01985 () | 379642..380706 | + | 1065 | WP_197743636.1 | endolytic transglycosylase MltG | - |
| Aargi30884_RS01990 () | 380716..381348 | + | 633 | WP_115714689.1 | uridine kinase | - |
| Aargi30884_RS01995 () | 381372..381851 | + | 480 | WP_115714690.1 | transcription elongation factor GreA | - |
| Aargi30884_RS02000 () | 381904..382374 | + | 471 | WP_115714691.1 | ComEA family DNA-binding protein | - |
| Aargi30884_RS02005 () | 382518..384320 | + | 1803 | WP_157964923.1 | MBL fold metallo-hydrolase | - |
| Aargi30884_RS02010 () | 384326..385270 | + | 945 | WP_118277244.1 | DNA polymerase III subunit delta | - |
| Aargi30884_RS02015 () | 385283..386488 | + | 1206 | WP_118277245.1 | L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | - |
| Aargi30884_RS02020 () | 386573..387226 | - | 654 | WP_115714695.1 | hypothetical protein | VF |
| Aargi30884_RS02025 () | 387429..390359 | + | 2931 | WP_115714696.1 | chromosome segregation protein SMC | - |
| Aargi30884_RS02030 () | 390359..391330 | + | 972 | WP_115714697.1 | signal recognition particle-docking protein FtsY | - |
| Aargi30884_RS02035 () | 391323..391640 | + | 318 | WP_115714698.1 | YlxM family DNA-binding protein | - |
| Aargi30884_RS02040 () | 391650..392846 | + | 1197 | WP_115714699.1 | acetate kinase | - |
| Aargi30884_RS02045 () | 392843..393811 | + | 969 | WP_174766934.1 | bifunctional oligoribonuclease/PAP phosphatase NrnA | - |
| Aargi30884_RS02050 () | 393887..396973 | + | 3087 | WP_163051389.1 | DNA polymerase III subunit alpha | - |
| Aargi30884_RS02055 () | 397115..397426 | + | 312 | WP_115714701.1 | 50S ribosomal protein L21 | - |
| Aargi30884_RS02060 () | 397432..397746 | + | 315 | WP_115714702.1 | ribosomal-processing cysteine protease Prp | - |
| Aargi30884_RS02065 () | 397749..398033 | + | 285 | WP_115714703.1 | 50S ribosomal protein L27 | - |
| Aargi30884_RS02070 () | 398092..399381 | + | 1290 | WP_118277249.1 | GTPase ObgE | - |
| Aargi30884_RS02075 () | 399479..400231 | + | 753 | WP_163051391.1 | exodeoxyribonuclease III | - |
| Aargi30884_RS02080 () | 400296..401126 | + | 831 | WP_118277251.1 | Cof-type HAD-IIB family hydrolase | - |
| Aargi30884_RS02085 () | 401223..401804 | + | 582 | WP_115714707.1 | Holliday junction branch migration protein RuvA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|