MGE detailed information
MGE type: Genomic_island MGE length: 51404 bp
Accession: NZ_AP019684 Location: 1199923..1251326 Organism: Xanthomonas campestris pv. campestris strain MAFF302021 Replicon: chromosome
Accession: NZ_AP019684 Location: 1199923..1251326 Organism: Xanthomonas campestris pv. campestris strain MAFF302021 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GDM11_RS05225 () | 1195678..1196463 | - | 786 | WP_011038258.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| GDM11_RS05230 () | 1196609..1197403 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| GDM11_RS05235 () | 1197452..1197652 | - | 201 | WP_016944633.1 | sulfur carrier protein ThiS | - |
| GDM11_RS05240 () | 1197841..1199625 | + | 1785 | WP_029217022.1 | autotransporter domain-containing esterase | - |
| GDM11_RS05250 () | 1199890..1201467 | + | 1578 | WP_100666311.1 | hypothetical protein ; Integrase | Integrase |
| GDM11_RS05255 () | 1201527..1201955 | + | 429 | WP_145998822.1 | hypothetical protein | - |
| GDM11_RS05260 () | 1202340..1203128 | - | 789 | WP_145998823.1 | hypothetical protein | - |
| GDM11_RS05265 () | 1203202..1204095 | - | 894 | WP_145998824.1 | hypothetical protein | - |
| GDM11_RS05270 () | 1204261..1204641 | - | 381 | WP_172973787.1 | hypothetical protein | - |
| GDM11_RS05275 () | 1204638..1204952 | - | 315 | WP_100666315.1 | hypothetical protein | - |
| GDM11_RS05280 () | 1205002..1205763 | - | 762 | WP_100666316.1 | hypothetical protein | - |
| GDM11_RS05285 () | 1205872..1206240 | + | 369 | WP_172973788.1 | helix-turn-helix domain-containing protein | - |
| GDM11_RS05290 () | 1206309..1206740 | + | 432 | WP_100666318.1 | hypothetical protein | - |
| GDM11_RS05295 () | 1206745..1207197 | - | 453 | WP_145998825.1 | hypothetical protein | - |
| GDM11_RS05300 () | 1207400..1208800 | - | 1401 | WP_100666320.1 | hypothetical protein ; Integrase | Integrase |
| GDM11_RS05305 () | 1209410..1209925 | - | 516 | WP_100666321.1 | hypothetical protein | - |
| GDM11_RS05310 () | 1210014..1210499 | + | 486 | WP_145998826.1 | hypothetical protein | - |
| GDM11_RS05315 () | 1210632..1212116 | - | 1485 | WP_100666322.1 | hypothetical protein | - |
| GDM11_RS05320 () | 1212196..1213161 | - | 966 | WP_145998827.1 | hypothetical protein | - |
| GDM11_RS05325 () | 1213551..1213811 | + | 261 | WP_145998828.1 | hypothetical protein | - |
| GDM11_RS05330 () | 1213798..1214295 | - | 498 | WP_152091502.1 | hypothetical protein | - |
| GDM11_RS05335 () | 1214405..1214935 | - | 531 | WP_152091503.1 | hypothetical protein | - |
| GDM11_RS05340 () | 1214970..1215782 | - | 813 | WP_152091504.1 | hypothetical protein | - |
| GDM11_RS05345 () | 1215779..1216087 | - | 309 | WP_152091505.1 | hypothetical protein | - |
| GDM11_RS05350 () | 1216298..1216777 | + | 480 | WP_152091506.1 | DNA repair protein RadC | - |
| GDM11_RS22890 () | 1216846..1217022 | + | 177 | WP_172973789.1 | hypothetical protein | - |
| GDM11_RS05355 () | 1217242..1217883 | + | 642 | WP_152091507.1 | DUF1629 domain-containing protein | - |
| GDM11_RS05360 () | 1217919..1220477 | + | 2559 | WP_152091508.1 | hypothetical protein | - |
| GDM11_RS05370 () | 1221951..1222623 | - | 673 | Protein_1001 | hypothetical protein | - |
| GDM11_RS05375 () | 1223036..1223521 | - | 486 | WP_152091557.1 | hypothetical protein | - |
| GDM11_RS05380 () | 1223625..1224254 | + | 630 | WP_152091509.1 | hypothetical protein | - |
| GDM11_RS22895 () | 1224372..1224530 | + | 159 | WP_172973790.1 | hypothetical protein | - |
| GDM11_RS05390 () | 1226598..1227074 | - | 477 | WP_152091510.1 | hypothetical protein | - |
| GDM11_RS05395 () | 1227235..1229169 | - | 1935 | WP_197737888.1 | AAA family ATPase | - |
| GDM11_RS05405 () | 1229744..1230043 | - | 300 | WP_100666201.1 | conjugal transfer protein TraD | - |
| GDM11_RS05410 () | 1230310..1231905 | + | 1596 | WP_100666199.1 | MobA/MobL family protein | - |
| GDM11_RS05415 () | 1231958..1232299 | - | 342 | WP_100666197.1 | hypothetical protein | - |
| GDM11_RS05420 () | 1232993..1233421 | + | 429 | WP_012437589.1 | hypothetical protein | - |
| GDM11_RS22900 () | 1233664..1233894 | - | 231 | WP_157382680.1 | hypothetical protein | - |
| GDM11_RS05425 () | 1233958..1234104 | + | 147 | WP_040940792.1 | hypothetical protein | - |
| GDM11_RS05430 () | 1234289..1234684 | + | 396 | WP_016945003.1 | hypothetical protein | - |
| GDM11_RS05435 () | 1234775..1235167 | + | 393 | WP_012437593.1 | H-NS histone family protein | - |
| GDM11_RS05445 () | 1235701..1237830 | - | 2130 | WP_011038223.1 | glycogen debranching protein GlgX | - |
| GDM11_RS05450 () | 1238324..1239199 | + | 876 | WP_016945000.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| GDM11_RS05455 () | 1239422..1239895 | + | 474 | WP_012437597.1 | hypothetical protein | - |
| GDM11_RS05460 () | 1239926..1240603 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| GDM11_RS05465 () | 1240596..1241930 | + | 1335 | WP_012437598.1 | HAMP domain-containing histidine kinase | - |
| GDM11_RS05470 () | 1242073..1242564 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| GDM11_RS05475 () | 1242561..1242851 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| GDM11_RS05480 () | 1242926..1243327 | - | 402 | WP_012437599.1 | type I toxin-antitoxin system SymE family toxin | - |
| GDM11_RS05490 () | 1243859..1244482 | - | 624 | WP_011038217.1 | dephospho-CoA kinase | - |
| GDM11_RS05495 () | 1244496..1245359 | - | 864 | WP_012437600.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| GDM11_RS05500 () | 1245366..1246627 | - | 1262 | Protein_1026 | Type II secretion system protein F | VF |
| GDM11_RS05505 () | 1246979..1247392 | + | 414 | WP_012437602.1 | Pilin-like competence factor ComP | VF |
| GDM11_RS05510 () | 1247509..1249122 | + | 1614 | WP_087942077.1 | phosphoethanolamine transferase | - |
| GDM11_RS05515 () | 1249133..1249762 | + | 630 | WP_012437604.1 | hypothetical protein | - |
| GDM11_RS05520 () | 1249732..1250573 | + | 842 | Protein_1030 | hypothetical protein | - |
| GDM11_RS05525 () | 1250665..1251326 | + | 662 | Protein_1031 | hypothetical protein | - |
| GDM11_RS05530 () | 1251361..1253094 | + | 1734 | WP_012437606.1 | type IV-A pilus assembly ATPase PilB | - |
| GDM11_RS05535 () | 1253511..1254905 | - | 1395 | WP_012437607.1 | sigma-54 dependent transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|