MGE detailed information
MGE type: Prophage MGE length: 44881 bp
Accession: NZ_AP019545 Location: 847972..892852 Organism: Staphylococcus aureus strain KG-22 Replicon: chromosome
Accession: NZ_AP019545 Location: 847972..892852 Organism: Staphylococcus aureus strain KG-22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GDK20_RS04050 () | 843034..844551 | + | 1518 | WP_001085507.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| GDK20_RS04055 () | 844681..845985 | + | 1305 | WP_001121760.1 | phosphopyruvate hydratase | - |
| GDK20_RS04060 () | 846324..846782 | + | 459 | WP_000785252.1 | hypothetical protein | - |
| GDK20_RS04065 () | 846849..847082 | + | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| GDK20_RS04070 () | 847198..847938 | + | 741 | WP_001165959.1 | carboxylesterase | - |
| GDK20_RS04075 () | 847972..850344 | + | 2373 | WP_001050048.1 | ribonuclease R | - |
| GDK20_RS04080 () | 850366..850830 | + | 465 | WP_001085183.1 | SsrA-binding protein SmpB | - |
| GDK20_RS04090 () | 851393..852499 | - | 1107 | WP_000121223.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| GDK20_RS04095 () | 852505..853152 | - | 648 | WP_072474260.1 | helix-turn-helix domain-containing protein | - |
| GDK20_RS04100 () | 853310..853516 | + | 207 | WP_001060953.1 | hypothetical protein | - |
| GDK20_RS04105 () | 853552..853779 | + | 228 | WP_000164237.1 | helix-turn-helix domain-containing protein | - |
| GDK20_RS04110 () | 853776..853922 | + | 147 | WP_000784893.1 | hypothetical protein | - |
| GDK20_RS04115 () | 853915..854124 | + | 210 | WP_001058487.1 | hypothetical protein | Antitoxin Detail |
| GDK20_RS04120 () | 854127..854444 | + | 318 | WP_001103933.1 | DUF1474 family protein | Toxin Detail |
| GDK20_RS04125 () | 854511..855380 | + | 870 | WP_001002695.1 | primase alpha helix C-terminal domain-containing protein | - |
| GDK20_RS04130 () | 855397..856866 | + | 1470 | WP_001668899.1 | virulence-associated E family protein | - |
| GDK20_RS04140 () | 857152..857514 | + | 363 | WP_001039169.1 | hypothetical protein | - |
| GDK20_RS04145 () | 857516..857800 | + | 285 | WP_000998179.1 | hypothetical protein | - |
| GDK20_RS04150 () | 857797..858438 | + | 642 | WP_001019810.1 | hypothetical protein | - |
| GDK20_RS04155 () | 858888..859229 | + | 342 | WP_001190615.1 | hypothetical protein | - |
| GDK20_RS04160 () | 859241..859819 | + | 579 | WP_000846280.1 | hypothetical protein | - |
| GDK20_RS04165 () | 859837..860055 | + | 219 | WP_000448770.1 | capsid morphogenesis B protein | - |
| GDK20_RS04170 () | 860106..860633 | + | 528 | WP_000771368.1 | spore coat protein | - |
| GDK20_RS04175 () | 860636..860977 | + | 342 | WP_000358774.1 | hypothetical protein | - |
| GDK20_RS04180 () | 860974..861543 | + | 570 | WP_001293076.1 | terminase small subunit | - |
| GDK20_RS04190 () | 861820..862788 | + | 969 | WP_000801979.1 | Abi family protein | - |
| GDK20_RS15370 () | 862930..863028 | + | 99 | WP_106901598.1 | hypothetical protein | - |
| GDK20_RS15375 () | 863058..863207 | + | 150 | WP_047211745.1 | hypothetical protein | - |
| GDK20_RS04200 () | 863752..864666 | + | 915 | WP_000825515.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| GDK20_RS04205 () | 864724..865572 | + | 849 | WP_000824908.1 | class I SAM-dependent methyltransferase | - |
| GDK20_RS04215 () | 866637..866960 | - | 324 | WP_001058299.1 | hypothetical protein | - |
| GDK20_RS15340 () | 866976..867223 | - | 248 | Protein_800 | hypothetical protein | - |
| GDK20_RS04225 () | 867314..868042 | - | 729 | WP_000757397.1 | DUF5067 domain-containing protein | - |
| GDK20_RS04230 () | 868237..869409 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| GDK20_RS04235 () | 869809..869964 | + | 156 | WP_001790158.1 | hypothetical protein | - |
| GDK20_RS04240 () | 869972..870493 | + | 522 | WP_117195051.1 | hypothetical protein | - |
| GDK20_RS04245 () | 870632..871162 | + | 531 | WP_001167158.1 | N-acetyltransferase | - |
| GDK20_RS04250 () | 871425..874394 | + | 2970 | WP_001056195.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| GDK20_RS04255 () | 874615..876117 | + | 1503 | WP_000791700.1 | Staphylocoagulase | VF |
| GDK20_RS04260 () | 876470..877492 | + | 1023 | WP_000728068.1 | extracellular matrix protein-binding adhesin Emp | - |
| GDK20_RS04265 () | 877827..878348 | + | 522 | WP_000824482.1 | Extracellular matrix protein-binding protein emp | VF |
| GDK20_RS04270 () | 878689..879375 | + | 687 | WP_000141557.1 | thermonuclease family protein | - |
| GDK20_RS04275 () | 879732..879932 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| GDK20_RS04280 () | 880424..880642 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| GDK20_RS04285 () | 880704..880988 | - | 285 | WP_001004399.1 | hypothetical protein | - |
| GDK20_RS04290 () | 881076..881645 | - | 570 | WP_001106654.1 | hypothetical protein | - |
| GDK20_RS04295 () | 881833..882021 | - | 189 | WP_000052076.1 | hypothetical protein | Toxin Detail |
| GDK20_RS04300 () | 882050..882310 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| GDK20_RS04305 () | 882651..882854 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| GDK20_RS04310 () | 882851..883087 | - | 237 | WP_000349581.1 | hypothetical protein | - |
| GDK20_RS04315 () | 883312..883893 | + | 582 | WP_001140693.1 | phosphoglycerate mutase family protein | - |
| GDK20_RS04320 () | 883966..884583 | - | 618 | WP_000255551.1 | LysE/ArgO family amino acid transporter | - |
| GDK20_RS04325 () | 884738..885232 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| GDK20_RS04330 () | 885631..886053 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| GDK20_RS04335 () | 886201..886917 | + | 717 | WP_000150011.1 | type I 3-dehydroquinate dehydratase | - |
| GDK20_RS04340 () | 887000..887539 | + | 540 | WP_000422908.1 | nitroreductase | - |
| GDK20_RS04345 () | 887690..888010 | - | 321 | WP_001147952.1 | thioredoxin family protein | - |
| GDK20_RS04350 () | 888154..888510 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| GDK20_RS04355 () | 888668..889048 | + | 381 | WP_000290491.1 | glycine cleavage system protein GcvH | - |
| GDK20_RS04365 () | 889227..890105 | + | 879 | WP_000932225.1 | DUF1963 domain-containing protein | - |
| GDK20_RS04375 () | 890902..891288 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| GDK20_RS04380 () | 891281..891577 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| GDK20_RS04385 () | 891827..892852 | + | 1026 | WP_000571207.1 | Methionine import ATP-binding protein MetN 2 | VF |
| GDK20_RS04390 () | 892845..893540 | + | 696 | WP_000520231.1 | ABC transporter permease | - |
| GDK20_RS04395 () | 893558..894379 | + | 822 | WP_000732324.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| GDK20_RS04400 () | 894733..894927 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| GDK20_RS04405 () | 895161..896012 | - | 852 | WP_001183854.1 | DUF368 domain-containing protein | - |
| GDK20_RS04410 () | 896340..897101 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|