MGE detailed information
MGE type: Prophage MGE length: 64265 bp
Accession: NZ_AP019545 Location: 1557825..1622089 Organism: Staphylococcus aureus strain KG-22 Replicon: chromosome
Accession: NZ_AP019545 Location: 1557825..1622089 Organism: Staphylococcus aureus strain KG-22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GDK20_RS07490 () | 1553117..1554073 | - | 957 | WP_152064735.1 | DUF1672 domain-containing protein | - |
| GDK20_RS07495 () | 1554281..1555453 | + | 1173 | WP_000195429.1 | IS256-like element IS256 family transposase | - |
| GDK20_RS07500 () | 1555549..1555864 | - | 316 | Protein_1436 | hypothetical protein | - |
| GDK20_RS07505 () | 1555876..1556772 | - | 897 | WP_000476346.1 | DUF1672 domain-containing protein | - |
| GDK20_RS07510 () | 1556830..1557735 | - | 906 | WP_000476865.1 | DUF1672 domain-containing protein | - |
| GDK20_RS07515 () | 1557825..1558010 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| GDK20_RS07520 () | 1558286..1558843 | - | 558 | WP_000528632.1 | hypothetical protein | - |
| GDK20_RS07525 () | 1559498..1560952 | - | 1455 | WP_152064736.1 | N-acetylmuramoyl-L-alanine amidase | - |
| GDK20_RS07530 () | 1560963..1561265 | - | 303 | WP_000339146.1 | phage holin | - |
| GDK20_RS07535 () | 1561401..1561700 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| GDK20_RS07540 () | 1561746..1561910 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| GDK20_RS07545 () | 1561903..1562292 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| GDK20_RS07550 () | 1562292..1563758 | - | 1467 | WP_000067127.1 | BppU family phage baseplate upper protein | - |
| GDK20_RS07555 () | 1563758..1565668 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| GDK20_RS07560 () | 1565684..1565974 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| GDK20_RS07565 () | 1565974..1567557 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| GDK20_RS07570 () | 1567566..1568390 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| GDK20_RS07575 () | 1568390..1574590 | - | 6201 | WP_152064737.1 | phage tail tape measure protein | - |
| GDK20_RS07580 () | 1574604..1574762 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| GDK20_RS07585 () | 1574813..1575154 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| GDK20_RS07590 () | 1575212..1575667 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| GDK20_RS07595 () | 1575759..1576400 | - | 642 | WP_000807541.1 | tail protein | - |
| GDK20_RS07600 () | 1576435..1576830 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| GDK20_RS07605 () | 1576831..1577232 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| GDK20_RS07610 () | 1577229..1577561 | - | 333 | WP_000395495.1 | hypothetical protein | - |
| GDK20_RS07615 () | 1577573..1577851 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| GDK20_RS07620 () | 1577920..1579083 | - | 1164 | WP_001142737.1 | phage major capsid protein | - |
| GDK20_RS07625 () | 1579095..1579868 | - | 774 | WP_000061862.1 | Clp protease ClpP | - |
| GDK20_RS07630 () | 1579852..1581090 | - | 1239 | WP_001100671.1 | phage portal protein | - |
| GDK20_RS07635 () | 1581095..1582786 | - | 1692 | WP_000153555.1 | terminase large subunit | - |
| GDK20_RS07640 () | 1582776..1583081 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| GDK20_RS07645 () | 1583210..1583524 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| GDK20_RS07650 () | 1583681..1584118 | - | 438 | WP_000513699.1 | transcriptional regulator | - |
| GDK20_RS07655 () | 1584131..1585498 | - | 1368 | WP_152064738.1 | DEAD/DEAH box helicase | - |
| GDK20_RS07660 () | 1585479..1585769 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| GDK20_RS07665 () | 1585903..1586007 | + | 105 | WP_072324141.1 | hypothetical protein | - |
| GDK20_RS07675 () | 1586110..1588557 | - | 2448 | WP_000884870.1 | virulence-associated E family protein | - |
| GDK20_RS07685 () | 1588845..1589045 | - | 201 | WP_000265252.1 | DUF1514 family protein | - |
| GDK20_RS07690 () | 1589113..1589265 | - | 153 | WP_000595263.1 | transcriptional activator RinB | - |
| GDK20_RS07695 () | 1589262..1589648 | - | 387 | WP_000592205.1 | hypothetical protein | - |
| GDK20_RS07700 () | 1589645..1589851 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| GDK20_RS07705 () | 1589888..1590418 | - | 531 | WP_000185653.1 | dUTP pyrophosphatase | - |
| GDK20_RS07710 () | 1590411..1590659 | - | 249 | WP_001065071.1 | DUF1024 family protein | - |
| GDK20_RS07715 () | 1590652..1590960 | - | 309 | WP_000144703.1 | hypothetical protein | - |
| GDK20_RS07720 () | 1590957..1591304 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| GDK20_RS07725 () | 1591301..1591705 | - | 405 | WP_000695753.1 | hypothetical protein | - |
| GDK20_RS07730 () | 1591708..1591914 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| GDK20_RS07735 () | 1591928..1592176 | - | 249 | WP_078064221.1 | hypothetical protein | - |
| GDK20_RS07740 () | 1592176..1592430 | - | 255 | WP_000022736.1 | DUF3310 domain-containing protein | - |
| GDK20_RS07745 () | 1592430..1592831 | - | 402 | WP_000113974.1 | PVL family protein | - |
| GDK20_RS07750 () | 1592831..1593016 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| GDK20_RS07755 () | 1593029..1594981 | - | 1953 | WP_001802096.1 | DNA polymerase | - |
| GDK20_RS07760 () | 1595050..1595607 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| GDK20_RS07765 () | 1595633..1596799 | - | 1167 | WP_000762532.1 | DUF2800 domain-containing protein | - |
| GDK20_RS07770 () | 1596796..1597158 | - | 363 | WP_152064739.1 | hypothetical protein | - |
| GDK20_RS07775 () | 1597173..1597496 | - | 324 | WP_000174998.1 | hypothetical protein | - |
| GDK20_RS07780 () | 1597575..1597736 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| GDK20_RS07785 () | 1597749..1598012 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| GDK20_RS07790 () | 1598037..1598252 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| GDK20_RS07795 () | 1598307..1598672 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| GDK20_RS07800 () | 1598641..1598886 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| GDK20_RS07805 () | 1598942..1599151 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| GDK20_RS07810 () | 1599141..1599284 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| GDK20_RS07815 () | 1599313..1600089 | - | 777 | WP_117206550.1 | Rha family transcriptional regulator | - |
| GDK20_RS07820 () | 1600112..1600339 | - | 228 | WP_015978369.1 | helix-turn-helix transcriptional regulator | - |
| GDK20_RS07825 () | 1600493..1601125 | + | 633 | WP_031915307.1 | XRE family transcriptional regulator | - |
| GDK20_RS07830 () | 1601141..1602061 | + | 921 | WP_117206548.1 | 3'-5' exoribonuclease | - |
| GDK20_RS07835 () | 1602157..1602339 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| GDK20_RS07840 () | 1602376..1602522 | + | 147 | WP_117206547.1 | hypothetical protein | - |
| GDK20_RS07845 () | 1602519..1603133 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| GDK20_RS07850 () | 1603259..1604464 | + | 1206 | WP_000264751.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| GDK20_RS07855 () | 1604507..1606534 | - | 2028 | WP_152064740.1 | hypothetical protein | - |
| GDK20_RS07860 () | 1606527..1607453 | - | 927 | WP_001557355.1 | DUF1672 domain-containing protein | - |
| GDK20_RS07865 () | 1607697..1609448 | - | 1752 | WP_000987775.1 | two-component system sensor histidine kinase SrrB | - |
| GDK20_RS07870 () | 1609429..1610154 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| GDK20_RS07875 () | 1610287..1611024 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| GDK20_RS07880 () | 1611017..1611559 | - | 543 | WP_000368656.1 | SMC-Scp complex subunit ScpB | - |
| GDK20_RS07885 () | 1611552..1612283 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| GDK20_RS07890 () | 1612375..1612881 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| GDK20_RS07895 () | 1612959..1613846 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| GDK20_RS07900 () | 1613895..1614344 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| GDK20_RS07905 () | 1614449..1614991 | - | 543 | WP_000365240.1 | NUDIX hydrolase | - |
| GDK20_RS07910 () | 1615073..1615981 | + | 909 | WP_001171335.1 | aldo/keto reductase | - |
| GDK20_RS07915 () | 1616197..1616445 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| GDK20_RS07920 () | 1616461..1617216 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| GDK20_RS07925 () | 1617358..1618173 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| GDK20_RS07930 () | 1618276..1619196 | - | 921 | WP_000454063.1 | ribonuclease Z | - |
| GDK20_RS07935 () | 1619509..1620993 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| GDK20_RS07940 () | 1621223..1622089 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| GDK20_RS07945 () | 1622171..1623820 | - | 1650 | WP_001041915.1 | alpha-glucosidase | - |
| GDK20_RS07950 () | 1623836..1624855 | - | 1020 | WP_000256319.1 | LacI family DNA-binding transcriptional regulator | - |
| GDK20_RS07955 () | 1624856..1625110 | - | 255 | WP_001792107.1 | hypothetical protein | - |
| GDK20_RS07960 () | 1625049..1625420 | - | 372 | WP_000413436.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|