MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 85258 bp
Accession: NZ_AP019543 Location: 1896423..1981680 Organism: Staphylococcus aureus strain KG-18 Replicon: chromosome
Accession: NZ_AP019543 Location: 1896423..1981680 Organism: Staphylococcus aureus strain KG-18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GDK18_RS09260 () | 1893543..1893854 | - | 312 | WP_000836461.1 | rhodanese-like domain-containing protein | - |
| GDK18_RS09265 () | 1893876..1896293 | - | 2418 | WP_001557386.1 | leucine--tRNA ligase | - |
| GDK18_RS09270 () | 1896581..1897762 | - | 1182 | WP_001025067.1 | MFS transporter | - |
| GDK18_RS09275 () | 1897872..1898825 | + | 954 | WP_000526539.1 | TIGR01212 family radical SAM protein | - |
| GDK18_RS09280 () | 1898822..1899385 | + | 564 | WP_000764419.1 | class I SAM-dependent methyltransferase | - |
| GDK18_RS09285 () | 1899508..1899909 | - | 402 | WP_000757543.1 | MarR family transcriptional regulator | - |
| GDK18_RS09290 () | 1900481..1901308 | - | 828 | WP_000266096.1 | alpha/beta hydrolase | - |
| GDK18_RS09295 () | 1901311..1901430 | - | 120 | WP_001790712.1 | hypothetical protein | - |
| GDK18_RS09300 () | 1901542..1902543 | + | 1002 | WP_001196362.1 | proline dehydrogenase | - |
| GDK18_RS09305 () | 1902665..1903129 | - | 465 | WP_001008549.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| GDK18_RS09310 () | 1903142..1904323 | - | 1182 | WP_001159037.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| GDK18_RS09315 () | 1904334..1904966 | - | 633 | WP_000493887.1 | riboflavin synthase | - |
| GDK18_RS09320 () | 1904973..1906016 | - | 1044 | WP_000077358.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| GDK18_RS09325 () | 1906497..1907999 | - | 1503 | WP_001261668.1 | FAD/NAD(P)-binding domain-containing protein | - |
| GDK18_RS09330 () | 1908522..1908836 | + | 315 | WP_000221177.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GDK18_RS09335 () | 1908836..1910128 | + | 1293 | WP_000989121.1 | arsenite efflux transporter membrane subunit ArsB | - |
| GDK18_RS09340 () | 1910215..1911069 | - | 855 | WP_001032833.1 | N-acetylglucosaminidase | - |
| GDK18_RS09345 () | 1911211..1912383 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| GDK18_RS09350 () | 1912677..1912901 | - | 225 | WP_000384171.1 | hypothetical protein | - |
| GDK18_RS09355 () | 1913100..1913570 | + | 471 | WP_000671057.1 | RNA polymerase sigma factor SigS | - |
| GDK18_RS09360 () | 1913683..1914126 | + | 444 | WP_001153742.1 | competence protein ComK | - |
| GDK18_RS09365 () | 1914113..1914556 | - | 444 | WP_001030469.1 | hypothetical protein | - |
| GDK18_RS09370 () | 1914852..1915487 | + | 636 | WP_001168903.1 | CPBP family intramembrane metalloprotease SdpA | - |
| GDK18_RS09375 () | 1915927..1916640 | - | 714 | WP_001096495.1 | transaldolase | - |
| GDK18_RS09385 () | 1917148..1918320 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| GDK18_RS15350 () | 1918385..1918534 | + | 150 | WP_001805800.1 | hypothetical protein | - |
| GDK18_RS09390 () | 1918790..1919155 | + | 366 | WP_001200542.1 | fluoride efflux transporter CrcB | - |
| GDK18_RS09395 () | 1919152..1919505 | + | 354 | WP_000623470.1 | CrcB family protein | - |
| GDK18_RS09400 () | 1919904..1921439 | + | 1536 | Protein_1807 | IS1182 family transposase | - |
| GDK18_RS09405 () | 1921502..1922335 | - | 834 | WP_000453306.1 | aldo/keto reductase | - |
| GDK18_RS09410 () | 1922547..1923455 | - | 909 | WP_000366163.1 | NERD domain-containing protein | - |
| GDK18_RS09415 () | 1923577..1924773 | - | 1197 | WP_152064750.1 | methionine adenosyltransferase | - |
| GDK18_RS09420 () | 1925145..1926737 | + | 1593 | WP_000109906.1 | phosphoenolpyruvate carboxykinase (ATP) | - |
| GDK18_RS09425 () | 1927115..1927861 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| GDK18_RS09430 () | 1927866..1928339 | - | 474 | WP_000672013.1 | nucleoside triphosphatase YtkD | - |
| GDK18_RS09435 () | 1928405..1928662 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| GDK18_RS09440 () | 1928659..1929660 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| GDK18_RS09445 () | 1929665..1931143 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| GDK18_RS09450 () | 1931302..1931757 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| GDK18_RS09455 () | 1932060..1932710 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| GDK18_RS09460 () | 1932791..1933786 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| GDK18_RS09465 () | 1933861..1934487 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| GDK18_RS09470 () | 1934528..1934869 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| GDK18_RS09475 () | 1934970..1935542 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| GDK18_RS09480 () | 1935740..1936752 | - | 1013 | Protein_1823 | IS3 family transposase ISClsp1 | Transposase |
| GDK18_RS09485 () | 1936897..1936992 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1937020..1937077 | - | 58 | - | - | Antitoxin Detail |
| GDK18_RS09490 () | 1937115..1937216 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| GDK18_RS09495 () | 1937194..1937355 | - | 162 | Protein_1826 | transposase | - |
| GDK18_RS09500 () | 1937346..1937840 | - | 495 | Protein_1827 | IS21 family transposase IS232 | Transposase |
| GDK18_RS09505 () | 1938292..1939521 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| GDK18_RS09510 () | 1939514..1941070 | - | 1557 | WP_000028669.1 | type I restriction-modification system subunit M | - |
| GDK18_RS09515 () | 1941234..1941368 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| GDK18_RS09520 () | 1941431..1942150 | - | 720 | WP_001038752.1 | hypothetical protein | VF |
| GDK18_RS09525 () | 1942252..1942359 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| GDK18_RS09530 () | 1942308..1943027 | - | 720 | WP_001038704.1 | hypothetical protein | VF |
| GDK18_RS09535 () | 1943148..1943867 | - | 720 | WP_001038872.1 | hypothetical protein | VF |
| GDK18_RS09540 () | 1943925..1944647 | - | 723 | WP_001039454.1 | hypothetical protein | VF |
| GDK18_RS09545 () | 1944772..1945479 | - | 708 | WP_001039427.1 | hypothetical protein | VF |
| GDK18_RS09555 () | 1946442..1947023 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| GDK18_RS09560 () | 1947496..1947784 | - | 289 | Protein_1838 | BsaG protein | - |
| GDK18_RS09565 () | 1947970..1948443 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| GDK18_RS09570 () | 1948448..1949239 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| GDK18_RS09575 () | 1949609..1950592 | - | 984 | WP_000782463.1 | Leucotoxin LukDv | VF |
| GDK18_RS09580 () | 1950594..1951529 | - | 936 | WP_152064751.1 | Leucotoxin LukEv | VF |
| GDK18_RS15355 () | 1952425..1952856 | + | 432 | Protein_1843 | hypothetical protein | - |
| GDK18_RS09590 () | 1953192..1953506 | + | 315 | WP_000420682.1 | YdcP family protein | - |
| GDK18_RS09595 () | 1953522..1953908 | + | 387 | WP_000985015.1 | YdcP family protein | - |
| GDK18_RS09600 () | 1953937..1954545 | + | 609 | Protein_1846 | ATP-binding protein | - |
| GDK18_RS09605 () | 1954574..1955722 | + | 1149 | WP_000323282.1 | replication initiation factor domain-containing protein | - |
| GDK18_RS09610 () | 1955765..1955986 | + | 222 | WP_001009056.1 | hypothetical protein | - |
| GDK18_RS09615 () | 1956103..1956600 | + | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| GDK18_RS09620 () | 1956575..1957081 | + | 507 | WP_000506270.1 | conjugal transfer protein | - |
| GDK18_RS09625 () | 1957065..1959512 | + | 2448 | WP_000331160.1 | ATP-binding protein | - |
| GDK18_RS09630 () | 1959515..1961692 | + | 2178 | WP_000804748.1 | membrane protein | - |
| GDK18_RS09635 () | 1961689..1962690 | + | 1002 | WP_000769868.1 | putative endopeptidase p60 | VF |
| GDK18_RS09640 () | 1962687..1963619 | + | 933 | WP_001224318.1 | conjugal transfer protein | - |
| GDK18_RS09645 () | 1963864..1963980 | + | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| GDK18_RS09650 () | 1963996..1965915 | + | 1920 | WP_000691736.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| GDK18_RS09655 () | 1966034..1966201 | + | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| GDK18_RS09660 () | 1966261..1966614 | - | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| GDK18_RS09670 () | 1967119..1967541 | + | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| GDK18_RS09675 () | 1967538..1967768 | + | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| GDK18_RS09685 () | 1968229..1968432 | + | 204 | WP_000814511.1 | excisionase | - |
| GDK18_RS09690 () | 1968514..1969731 | + | 1218 | WP_001291561.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| GDK18_RS09695 () | 1969948..1970736 | + | 789 | WP_000206343.1 | DUF1828 domain-containing protein | - |
| GDK18_RS09700 () | 1971570..1972064 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| GDK18_RS09705 () | 1972142..1972378 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| GDK18_RS09710 () | 1972399..1973175 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| GDK18_RS09720 () | 1973727..1974503 | - | 777 | WP_000736712.1 | Enterotoxin type G | VF |
| GDK18_RS09725 () | 1974696..1975868 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| GDK18_RS09735 () | 1976118..1976873 | - | 756 | WP_001236362.1 | Enterotoxin type A | VF |
| GDK18_RS09740 () | 1976912..1977683 | - | 772 | Protein_1870 | Enterotoxin type C-2 | VF |
| GDK18_RS09745 () | 1977837..1978565 | - | 729 | WP_000713847.1 | Enterotoxin type A | VF |
| GDK18_RS09750 () | 1978600..1979319 | - | 720 | WP_000821658.1 | Enterotoxin type D | VF |
| GDK18_RS09760 () | 1979563..1980735 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| GDK18_RS09765 () | 1980932..1981714 | - | 783 | WP_010922839.1 | staphylococcal enterotoxin type O | - |
| GDK18_RS09770 () | 1981945..1983264 | - | 1320 | WP_001557163.1 | ISL3-like element IS1181 family transposase | - |
| GDK18_RS09815 () | 1984594..1985148 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|