MGE detailed information
MGE type: Prophage MGE length: 64265 bp
Accession: NZ_AP019543 Location: 1553148..1617412 Organism: Staphylococcus aureus strain KG-18 Replicon: chromosome
Accession: NZ_AP019543 Location: 1553148..1617412 Organism: Staphylococcus aureus strain KG-18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GDK18_RS07465 () | 1548440..1549396 | - | 957 | WP_152064735.1 | DUF1672 domain-containing protein | - |
| GDK18_RS07470 () | 1549604..1550776 | + | 1173 | WP_000195429.1 | IS256-like element IS256 family transposase | - |
| GDK18_RS07475 () | 1550872..1551187 | - | 316 | Protein_1429 | hypothetical protein | - |
| GDK18_RS07480 () | 1551199..1552095 | - | 897 | WP_000476346.1 | DUF1672 domain-containing protein | - |
| GDK18_RS07485 () | 1552153..1553058 | - | 906 | WP_000476865.1 | DUF1672 domain-containing protein | - |
| GDK18_RS07490 () | 1553148..1553333 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| GDK18_RS07495 () | 1553609..1554166 | - | 558 | WP_000528632.1 | hypothetical protein | - |
| GDK18_RS07500 () | 1554821..1556275 | - | 1455 | WP_152064736.1 | N-acetylmuramoyl-L-alanine amidase | - |
| GDK18_RS07505 () | 1556286..1556588 | - | 303 | WP_000339146.1 | phage holin | - |
| GDK18_RS07510 () | 1556724..1557023 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| GDK18_RS07515 () | 1557069..1557233 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| GDK18_RS07520 () | 1557226..1557615 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| GDK18_RS07525 () | 1557615..1559081 | - | 1467 | WP_000067127.1 | BppU family phage baseplate upper protein | - |
| GDK18_RS07530 () | 1559081..1560991 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| GDK18_RS07535 () | 1561007..1561297 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| GDK18_RS07540 () | 1561297..1562880 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| GDK18_RS07545 () | 1562889..1563713 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| GDK18_RS07550 () | 1563713..1569913 | - | 6201 | WP_152064737.1 | phage tail tape measure protein | - |
| GDK18_RS07555 () | 1569927..1570085 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| GDK18_RS07560 () | 1570136..1570477 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| GDK18_RS07565 () | 1570535..1570990 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| GDK18_RS07570 () | 1571082..1571723 | - | 642 | WP_000807541.1 | tail protein | - |
| GDK18_RS07575 () | 1571758..1572153 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| GDK18_RS07580 () | 1572154..1572555 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| GDK18_RS07585 () | 1572552..1572884 | - | 333 | WP_000395495.1 | hypothetical protein | - |
| GDK18_RS07590 () | 1572896..1573174 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| GDK18_RS07595 () | 1573243..1574406 | - | 1164 | WP_001142737.1 | phage major capsid protein | - |
| GDK18_RS07600 () | 1574418..1575191 | - | 774 | WP_000061862.1 | Clp protease ClpP | - |
| GDK18_RS07605 () | 1575175..1576413 | - | 1239 | WP_001100671.1 | phage portal protein | - |
| GDK18_RS07610 () | 1576418..1578109 | - | 1692 | WP_000153555.1 | terminase large subunit | - |
| GDK18_RS07615 () | 1578099..1578404 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| GDK18_RS07620 () | 1578533..1578847 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| GDK18_RS07625 () | 1579004..1579441 | - | 438 | WP_000513699.1 | transcriptional regulator | - |
| GDK18_RS07630 () | 1579454..1580821 | - | 1368 | WP_152064738.1 | DEAD/DEAH box helicase | - |
| GDK18_RS07635 () | 1580802..1581092 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| GDK18_RS07640 () | 1581226..1581330 | + | 105 | WP_072324141.1 | hypothetical protein | - |
| GDK18_RS07650 () | 1581433..1583880 | - | 2448 | WP_000884870.1 | virulence-associated E family protein | - |
| GDK18_RS07660 () | 1584168..1584368 | - | 201 | WP_000265252.1 | DUF1514 family protein | - |
| GDK18_RS07665 () | 1584436..1584588 | - | 153 | WP_000595263.1 | transcriptional activator RinB | - |
| GDK18_RS07670 () | 1584585..1584971 | - | 387 | WP_000592205.1 | hypothetical protein | - |
| GDK18_RS07675 () | 1584968..1585174 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| GDK18_RS07680 () | 1585211..1585741 | - | 531 | WP_000185653.1 | dUTP pyrophosphatase | - |
| GDK18_RS07685 () | 1585734..1585982 | - | 249 | WP_001065071.1 | DUF1024 family protein | - |
| GDK18_RS07690 () | 1585975..1586283 | - | 309 | WP_000144703.1 | hypothetical protein | - |
| GDK18_RS07695 () | 1586280..1586627 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| GDK18_RS07700 () | 1586624..1587028 | - | 405 | WP_000695753.1 | hypothetical protein | - |
| GDK18_RS07705 () | 1587031..1587237 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| GDK18_RS07710 () | 1587251..1587499 | - | 249 | WP_078064221.1 | hypothetical protein | - |
| GDK18_RS07715 () | 1587499..1587753 | - | 255 | WP_000022736.1 | DUF3310 domain-containing protein | - |
| GDK18_RS07720 () | 1587753..1588154 | - | 402 | WP_000113974.1 | PVL family protein | - |
| GDK18_RS07725 () | 1588154..1588339 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| GDK18_RS07730 () | 1588352..1590304 | - | 1953 | WP_001802096.1 | DNA polymerase | - |
| GDK18_RS07735 () | 1590373..1590930 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| GDK18_RS07740 () | 1590956..1592122 | - | 1167 | WP_000762532.1 | DUF2800 domain-containing protein | - |
| GDK18_RS07745 () | 1592119..1592481 | - | 363 | WP_152064739.1 | hypothetical protein | - |
| GDK18_RS07750 () | 1592496..1592819 | - | 324 | WP_000174998.1 | hypothetical protein | - |
| GDK18_RS07755 () | 1592898..1593059 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| GDK18_RS07760 () | 1593072..1593335 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| GDK18_RS07765 () | 1593360..1593575 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| GDK18_RS07770 () | 1593630..1593995 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| GDK18_RS07775 () | 1593964..1594209 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| GDK18_RS07780 () | 1594265..1594474 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| GDK18_RS07785 () | 1594464..1594607 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| GDK18_RS07790 () | 1594636..1595412 | - | 777 | WP_117206550.1 | Rha family transcriptional regulator | - |
| GDK18_RS07795 () | 1595435..1595662 | - | 228 | WP_015978369.1 | helix-turn-helix transcriptional regulator | - |
| GDK18_RS07800 () | 1595816..1596448 | + | 633 | WP_031915307.1 | XRE family transcriptional regulator | - |
| GDK18_RS07805 () | 1596464..1597384 | + | 921 | WP_117206548.1 | 3'-5' exoribonuclease | - |
| GDK18_RS07810 () | 1597480..1597662 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| GDK18_RS07815 () | 1597699..1597845 | + | 147 | WP_117206547.1 | hypothetical protein | - |
| GDK18_RS07820 () | 1597842..1598456 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| GDK18_RS07825 () | 1598582..1599787 | + | 1206 | WP_000264751.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GDK18_RS07830 () | 1599830..1601857 | - | 2028 | WP_152064740.1 | hypothetical protein | - |
| GDK18_RS07835 () | 1601850..1602776 | - | 927 | WP_001557355.1 | DUF1672 domain-containing protein | - |
| GDK18_RS07840 () | 1603020..1604771 | - | 1752 | WP_000987775.1 | two-component system sensor histidine kinase SrrB | - |
| GDK18_RS07845 () | 1604752..1605477 | - | 726 | WP_000064078.1 | Regulator of RpoS | VF |
| GDK18_RS07850 () | 1605610..1606347 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| GDK18_RS07855 () | 1606340..1606882 | - | 543 | WP_000368656.1 | SMC-Scp complex subunit ScpB | - |
| GDK18_RS07860 () | 1606875..1607606 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| GDK18_RS07865 () | 1607698..1608204 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| GDK18_RS07870 () | 1608282..1609169 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| GDK18_RS07875 () | 1609218..1609667 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| GDK18_RS07880 () | 1609772..1610314 | - | 543 | WP_000365240.1 | NUDIX hydrolase | - |
| GDK18_RS07885 () | 1610396..1611304 | + | 909 | WP_001171335.1 | aldo/keto reductase | - |
| GDK18_RS07890 () | 1611520..1611768 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| GDK18_RS07895 () | 1611784..1612539 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| GDK18_RS07900 () | 1612681..1613496 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| GDK18_RS07905 () | 1613599..1614519 | - | 921 | WP_000454063.1 | ribonuclease Z | - |
| GDK18_RS07910 () | 1614832..1616316 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| GDK18_RS07915 () | 1616546..1617412 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| GDK18_RS07920 () | 1617494..1619143 | - | 1650 | WP_001041915.1 | alpha-glucosidase | - |
| GDK18_RS07925 () | 1619159..1620178 | - | 1020 | WP_000256319.1 | LacI family DNA-binding transcriptional regulator | - |
| GDK18_RS07930 () | 1620179..1620433 | - | 255 | WP_001792107.1 | hypothetical protein | - |
| GDK18_RS07935 () | 1620372..1620743 | - | 372 | WP_000413436.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|