MGE detailed information
MGE type: Prophage MGE length: 42193 bp
Accession: NZ_AP019531 Location: 946566..988758 Organism: Serratia symbiotica strain IS Replicon: chromosome
Accession: NZ_AP019531 Location: 946566..988758 Organism: Serratia symbiotica strain IS Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSYIS1_RS04880 () | 942091..942552 | - | 462 | Protein_936 | YchJ family protein | - |
| SSYIS1_RS04885 () | 943056..944069 | + | 1014 | WP_006708804.1 | two-component system response regulator RssB | - |
| SSYIS1_RS04890 () | 944256..945173 | + | 918 | WP_006708803.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| SSYIS1_RS04895 () | 945206..946555 | + | 1350 | WP_149590633.1 | UDP-glucose/GDP-mannose dehydrogenase family protein | - |
| SSYIS1_RS04900 () | 946566..947576 | + | 1011 | WP_040266114.1 | UDP-N-acetylglucosamine 4-epimerase | VF |
| SSYIS1_RS04905 () | 947784..948743 | + | 960 | WP_149590507.1 | IS481 family transposase ISAisp3 | Transposase |
| SSYIS1_RS04910 () | 948790..950910 | + | 2121 | Protein_942 | DNA polymerase II | - |
| SSYIS1_RS04915 () | 951180..954067 | + | 2888 | Protein_943 | RNA polymerase-associated protein RapA | - |
| SSYIS1_RS04920 () | 954116..954766 | + | 651 | WP_006708801.1 | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA | - |
| SSYIS1_RS04925 () | 954806..955612 | - | 807 | WP_006708800.1 | co-chaperone DjlA | - |
| SSYIS1_RS04930 () | 955838..958216 | + | 2379 | WP_006708799.1 | LPS assembly protein LptD | - |
| SSYIS1_RS04935 () | 958283..959578 | + | 1296 | WP_037388717.1 | peptidylprolyl isomerase SurA | - |
| SSYIS1_RS04940 () | 959568..960560 | + | 993 | WP_037388772.1 | 4-hydroxythreonine-4-phosphate dehydrogenase | VF |
| SSYIS1_RS04945 () | 960553..961371 | + | 819 | WP_149590634.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| SSYIS1_RS04950 () | 961384..961494 | + | 111 | Protein_950 | Co2+/Mg2+ efflux protein ApaG | - |
| SSYIS1_RS04955 () | 961635..961852 | - | 218 | Protein_951 | transposase | - |
| SSYIS1_RS04960 () | 962116..962787 | - | 672 | WP_149590635.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| SSYIS1_RS04965 () | 963018..963389 | - | 372 | WP_071837612.1 | IS66 family transposase ISPlu20 | Transposase |
| SSYIS1_RS04970 () | 963423..963941 | - | 519 | WP_050789090.1 | IS66 family transposase ISPlu20 | Transposase |
| SSYIS1_RS04975 () | 963945..964037 | - | 93 | Protein_955 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| SSYIS1_RS14525 () | 964477..964623 | - | 147 | WP_172624176.1 | IS3 family transposase ISBrsa1 | Transposase |
| SSYIS1_RS04980 () | 964888..965712 | - | 825 | WP_149590636.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | - |
| SSYIS1_RS04985 () | 965748..965966 | - | 219 | Protein_958 | NADPH-dependent assimilatory sulfite reductase flavoprotein subunit | - |
| SSYIS1_RS04990 () | 966534..966893 | + | 360 | WP_149590637.1 | 6-carboxytetrahydropterin synthase QueD | - |
| SSYIS1_RS04995 () | 966979..967196 | - | 218 | Protein_960 | transposase | - |
| SSYIS1_RS05000 () | 967460..968131 | - | 672 | WP_149590635.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| SSYIS1_RS05005 () | 968362..968733 | - | 372 | WP_071837612.1 | IS66 family transposase ISPlu20 | Transposase |
| SSYIS1_RS05010 () | 968767..969285 | - | 519 | WP_050789090.1 | IS66 family transposase ISPlu20 | Transposase |
| SSYIS1_RS05015 () | 969289..969381 | - | 93 | Protein_964 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| SSYIS1_RS14530 () | 969821..969967 | - | 147 | WP_172624176.1 | IS3 family transposase ISBrsa1 | Transposase |
| SSYIS1_RS05020 () | 970232..971056 | - | 825 | WP_149590636.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | - |
| SSYIS1_RS05025 () | 971092..971310 | - | 219 | Protein_967 | NADPH-dependent assimilatory sulfite reductase flavoprotein subunit | - |
| SSYIS1_RS05030 () | 971539..972471 | + | 933 | Protein_968 | NADPH-dependent assimilatory sulfite reductase flavoprotein subunit | - |
| SSYIS1_RS05035 () | 972471..974186 | + | 1716 | WP_149590638.1 | assimilatory sulfite reductase (NADPH) hemoprotein subunit | - |
| SSYIS1_RS05040 () | 974404..975132 | + | 729 | WP_006708172.1 | phosphoadenylyl-sulfate reductase | - |
| SSYIS1_RS05050 () | 975445..976071 | + | 627 | WP_050789064.1 | hypothetical protein | - |
| SSYIS1_RS05055 () | 976333..976578 | + | 246 | WP_006708173.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SSYIS1_RS05060 () | 976575..976841 | + | 267 | WP_071985748.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| SSYIS1_RS05065 () | 976946..977287 | + | 342 | WP_037388119.1 | hypothetical protein | - |
| SSYIS1_RS05070 () | 977596..977916 | + | 321 | WP_006708174.1 | cell division protein FtsB | - |
| SSYIS1_RS05075 () | 977920..978627 | + | 708 | WP_006708175.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| SSYIS1_RS05080 () | 978638..979111 | + | 474 | WP_149590639.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| SSYIS1_RS05085 () | 979116..980153 | + | 1038 | WP_006708177.1 | tRNA pseudouridine(13) synthase TruD | - |
| SSYIS1_RS05090 () | 980131..980892 | + | 762 | WP_006708178.1 | 5'/3'-nucleotidase SurE | - |
| SSYIS1_RS05095 () | 980899..981525 | + | 627 | WP_006708179.1 | protein-L-isoaspartate(D-aspartate) O-methyltransferase | - |
| SSYIS1_RS05100 () | 981840..982796 | + | 957 | WP_006708180.1 | murein hydrolase activator NlpD | - |
| SSYIS1_RS05105 () | 982850..983848 | + | 999 | WP_006708181.1 | RNA polymerase sigma factor RpoS | - |
| SSYIS1_RS05110 () | 983930..986485 | - | 2556 | WP_037388156.1 | DNA mismatch repair protein MutS | - |
| SSYIS1_RS05115 () | 986725..987300 | + | 576 | Protein_984 | DUF4102 domain-containing protein | - |
| SSYIS1_RS05125 () | 987550..988758 | + | 1209 | Protein_985 | IS256 family transposase ISEc39 | Transposase |
| SSYIS1_RS05135 () | 989149..989301 | + | 153 | WP_006708183.1 | AcrZ family multidrug efflux pump-associated protein | - |
| SSYIS1_RS05140 () | 989505..990276 | + | 772 | Protein_987 | molybdate ABC transporter substrate-binding protein | - |
| SSYIS1_RS05145 () | 990273..990963 | + | 691 | Protein_988 | molybdate ABC transporter permease subunit | - |
| SSYIS1_RS05150 () | 990964..992031 | + | 1068 | WP_149590640.1 | molybdenum ABC transporter ATP-binding protein ModC | - |
| SSYIS1_RS05155 () | 992051..992875 | - | 825 | WP_006708185.1 | pyridoxal phosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|