MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 76584 bp
Accession: NZ_AP019531 Location: 1481887..1558470 Organism: Serratia symbiotica strain IS Replicon: chromosome
Accession: NZ_AP019531 Location: 1481887..1558470 Organism: Serratia symbiotica strain IS Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSYIS1_RS07500 () | 1476955..1477923 | - | 969 | WP_006709687.1 | cysteine synthase A | - |
| SSYIS1_RS07505 () | 1478089..1478850 | - | 762 | WP_006709688.1 | sulfate transporter CysZ | - |
| SSYIS1_RS07510 () | 1479071..1480003 | + | 933 | WP_006709689.1 | cell division protein ZipA | - |
| SSYIS1_RS07515 () | 1480083..1482140 | + | 2058 | WP_006709690.1 | NAD-dependent DNA ligase LigA | - |
| SSYIS1_RS07520 () | 1482570..1483379 | - | 810 | WP_006709691.1 | Ferric enterobactin transport ATP-binding protein FepC | VF |
| SSYIS1_RS07525 () | 1483400..1484417 | - | 1018 | Protein_1447 | iron-enterobactin ABC transporter permease | - |
| SSYIS1_RS07530 () | 1484417..1485031 | - | 615 | WP_149590719.1 | Ferric enterobactin transport system permease protein FepD | VF |
| SSYIS1_RS07535 () | 1485374..1486392 | - | 1019 | Protein_1449 | Ferrienterobactin-binding periplasmic protein | VF |
| SSYIS1_RS07540 () | 1486995..1487819 | + | 825 | Protein_1450 | Recombination-promoting nuclease RpnA | VF |
| SSYIS1_RS07545 () | 1487869..1488356 | - | 488 | Protein_1451 | pyridoxal-phosphate dependent enzyme | - |
| SSYIS1_RS07550 () | 1488444..1489516 | - | 1073 | Protein_1452 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| SSYIS1_RS07555 () | 1489506..1490378 | - | 873 | WP_149590720.1 | sulfate/thiosulfate ABC transporter permease CysW | - |
| SSYIS1_RS07560 () | 1490371..1490925 | - | 555 | Protein_1454 | sulfate ABC transporter permease subunit CysT | - |
| SSYIS1_RS07565 () | 1490998..1492206 | + | 1209 | Protein_1455 | IS256 family transposase ISEc39 | Transposase |
| SSYIS1_RS07570 () | 1492228..1492962 | - | 735 | WP_172624184.1 | F1 capsule-anchoring protein | VF |
| SSYIS1_RS07575 () | 1492995..1493759 | - | 765 | WP_149590964.1 | Chaperone protein caf1M | VF |
| SSYIS1_RS07580 () | 1494915..1495897 | + | 983 | Protein_1458 | IS481 family transposase | - |
| SSYIS1_RS07585 () | 1496367..1497113 | - | 747 | WP_149590721.1 | hypothetical protein | - |
| SSYIS1_RS07590 () | 1497234..1497575 | - | 342 | WP_006707982.1 | hypothetical protein | - |
| SSYIS1_RS07600 () | 1497865..1498281 | - | 417 | WP_006707983.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| SSYIS1_RS07605 () | 1498278..1498508 | - | 231 | WP_006707984.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| SSYIS1_RS07610 () | 1498789..1499067 | - | 279 | WP_006710054.1 | hypothetical protein | - |
| SSYIS1_RS07615 () | 1499067..1499705 | - | 639 | WP_006710053.1 | AAA family ATPase | - |
| SSYIS1_RS07620 () | 1500217..1500861 | + | 645 | WP_006707987.1 | methylase | - |
| SSYIS1_RS14735 () | 1501532..1501954 | + | 423 | WP_197737014.1 | hypothetical protein | - |
| SSYIS1_RS07630 () | 1502061..1502477 | + | 417 | WP_149590498.1 | IS66 family transposase ISEcl6 | Transposase |
| SSYIS1_RS07635 () | 1502474..1502824 | + | 351 | WP_149590497.1 | IS66 family transposase ISEcl6 | Transposase |
| SSYIS1_RS14580 () | 1502849..1503013 | + | 165 | WP_172624155.1 | IS66 family transposase ISKox1 | Transposase |
| SSYIS1_RS07640 () | 1502991..1503544 | + | 554 | Protein_1470 | IS66 family transposase ISEcl6 | Transposase |
| SSYIS1_RS07645 () | 1503574..1503732 | + | 159 | Protein_1471 | ATP-binding protein | - |
| SSYIS1_RS07650 () | 1503826..1504314 | + | 489 | WP_081458809.1 | IS66 family transposase ISPlu20 | Transposase |
| SSYIS1_RS07655 () | 1504380..1504559 | + | 180 | Protein_1473 | IS5 family transposase IS903B | Transposase |
| SSYIS1_RS07660 () | 1504643..1505005 | + | 363 | WP_149590722.1 | hypothetical protein | - |
| SSYIS1_RS07665 () | 1505399..1505955 | + | 557 | Protein_1475 | Acyl-homoserine-lactone synthase | VF |
| SSYIS1_RS07670 () | 1505982..1506751 | - | 770 | Protein_1476 | Transcriptional activator protein EsaR | VF |
| SSYIS1_RS07675 () | 1507274..1507710 | + | 437 | Protein_1477 | IS91 family transposase ISVa3 | Transposase |
| SSYIS1_RS07680 () | 1507779..1508674 | - | 896 | Protein_1478 | IS5 family transposase IS903 | Transposase |
| SSYIS1_RS07685 () | 1508717..1510042 | + | 1326 | WP_149590723.1 | autotransporter domain-containing protein | - |
| SSYIS1_RS07690 () | 1510103..1510638 | + | 536 | Protein_1480 | Phospholipase D | VF |
| SSYIS1_RS07695 () | 1511133..1512179 | + | 1047 | WP_149590724.1 | Replication protein | - |
| SSYIS1_RS07715 () | 1513687..1514262 | - | 576 | WP_006709163.1 | Tn3 family transposase ISPsy42 | Transposase |
| SSYIS1_RS07720 () | 1514704..1515843 | + | 1140 | WP_006709162.1 | DUF4935 domain-containing protein | - |
| SSYIS1_RS07725 () | 1515955..1516857 | + | 903 | WP_149590726.1 | Recombination-promoting nuclease RpnA | VF |
| SSYIS1_RS07730 () | 1517166..1517600 | - | 435 | WP_149590727.1 | recombination regulator RecX | - |
| SSYIS1_RS07735 () | 1517597..1518991 | - | 1395 | WP_149590728.1 | regulatory protein RecX | - |
| SSYIS1_RS07740 () | 1519068..1519652 | - | 585 | WP_006709160.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| SSYIS1_RS07745 () | 1519771..1522712 | - | 2942 | Protein_1488 | Tn3 family transposase TnpA_ISYps3 | Transposase |
| SSYIS1_RS07750 () | 1522933..1523595 | + | 663 | WP_172624185.1 | hypothetical protein | - |
| SSYIS1_RS07755 () | 1523768..1524562 | + | 795 | WP_006709158.1 | ParA family protein | - |
| SSYIS1_RS07760 () | 1524549..1524800 | + | 252 | WP_006709157.1 | hypothetical protein | - |
| SSYIS1_RS07765 () | 1524916..1525302 | - | 387 | Protein_1492 | DUF4113 domain-containing protein | - |
| SSYIS1_RS07770 () | 1525347..1526137 | + | 791 | Protein_1493 | plasmid SOS inhibition protein A | - |
| SSYIS1_RS07775 () | 1526156..1526494 | + | 339 | WP_006709156.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SSYIS1_RS07780 () | 1526491..1526781 | + | 291 | WP_006709155.1 | helix-turn-helix domain-containing protein | - |
| SSYIS1_RS07785 () | 1527205..1527447 | + | 243 | WP_172624186.1 | hypothetical protein | - |
| SSYIS1_RS07790 () | 1527784..1528626 | - | 843 | Protein_1497 | Tn3 family transposase TnpA_Tn3 | Transposase |
| SSYIS1_RS07795 () | 1528663..1529871 | - | 1209 | WP_149590730.1 | IS256 family transposase ISEc39 | Transposase |
| SSYIS1_RS07800 () | 1529945..1530931 | - | 987 | Protein_1499 | Tn3 family transposase TnpA_Tn3 | Transposase |
| SSYIS1_RS07805 () | 1531030..1531374 | + | 345 | WP_006709152.1 | hypothetical protein | - |
| SSYIS1_RS07810 () | 1531371..1533327 | + | 1957 | Protein_1501 | relaxase/mobilization nuclease domain-containing protein | - |
| SSYIS1_RS07815 () | 1533356..1534625 | - | 1270 | Protein_1502 | translesion error-prone DNA polymerase V subunit UmuC | - |
| SSYIS1_RS07820 () | 1534649..1535110 | - | 462 | WP_081458788.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| SSYIS1_RS07825 () | 1535386..1535766 | + | 381 | WP_006709149.1 | hypothetical protein | - |
| SSYIS1_RS07830 () | 1535767..1536693 | + | 927 | WP_172624209.1 | Recombination-promoting nuclease RpnA | VF |
| SSYIS1_RS07835 () | 1536919..1537509 | + | 591 | WP_149590732.1 | helix-turn-helix transcriptional regulator | - |
| SSYIS1_RS07840 () | 1537496..1538344 | + | 849 | WP_149590733.1 | queuosine precursor transporter | - |
| SSYIS1_RS07845 () | 1538348..1539046 | - | 699 | WP_149590734.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| SSYIS1_RS07850 () | 1539196..1539744 | - | 549 | WP_006709143.1 | helix-turn-helix domain-containing protein | - |
| SSYIS1_RS07855 () | 1540439..1540837 | + | 399 | WP_149590735.1 | HNH endonuclease | - |
| SSYIS1_RS07860 () | 1540894..1541136 | + | 243 | WP_037389042.1 | hypothetical protein | VF |
| SSYIS1_RS07865 () | 1541646..1544462 | + | 2817 | WP_149590736.1 | hypothetical protein | - |
| SSYIS1_RS07870 () | 1544473..1545012 | + | 540 | WP_006709145.1 | conjugal transfer protein TraQ | - |
| SSYIS1_RS07875 () | 1545237..1545482 | + | 246 | WP_050789106.1 | hypothetical protein | - |
| SSYIS1_RS07880 () | 1545490..1545771 | + | 282 | WP_081458787.1 | TSUP family transporter | - |
| SSYIS1_RS14585 () | 1545781..1545936 | + | 156 | WP_172624187.1 | hypothetical protein | - |
| SSYIS1_RS07885 () | 1546459..1547505 | + | 1047 | WP_149590724.1 | Replication protein | - |
| SSYIS1_RS07895 () | 1548350..1548841 | + | 492 | WP_149590738.1 | Outer membrane protein YopM | VF |
| SSYIS1_RS07900 () | 1548909..1549880 | + | 972 | WP_149590739.1 | IS481 family transposase ISAisp3 | Transposase |
| SSYIS1_RS07905 () | 1549889..1550032 | + | 144 | WP_149590965.1 | hypothetical protein | - |
| SSYIS1_RS07910 () | 1550097..1550393 | + | 297 | WP_172624188.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| SSYIS1_RS07920 () | 1550510..1551868 | + | 1359 | WP_050789046.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| SSYIS1_RS07925 () | 1551843..1551992 | - | 150 | WP_149590740.1 | transposase | - |
| SSYIS1_RS07930 () | 1552079..1552234 | + | 156 | Protein_1524 | polysaccharide deacetylase family protein | - |
| SSYIS1_RS07935 () | 1552287..1552667 | - | 381 | WP_037388539.1 | aspartate 1-decarboxylase | - |
| SSYIS1_RS07940 () | 1553350..1553670 | + | 321 | WP_149590741.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SSYIS1_RS07945 () | 1553660..1553944 | + | 285 | WP_037387915.1 | helix-turn-helix domain-containing protein | - |
| SSYIS1_RS07950 () | 1554066..1554257 | - | 192 | WP_037387917.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| SSYIS1_RS14590 () | 1554388..1554564 | + | 177 | WP_172624189.1 | hypothetical protein | - |
| SSYIS1_RS07955 () | 1554670..1555092 | + | 423 | WP_149590742.1 | hypothetical protein | - |
| SSYIS1_RS07960 () | 1555114..1556022 | - | 909 | Protein_1531 | IS256 family transposase | - |
| SSYIS1_RS07965 () | 1556068..1557273 | - | 1206 | WP_149590952.1 | IS256 family transposase ISAs3 | Transposase |
| SSYIS1_RS14740 () | 1557352..1557921 | + | 570 | WP_197737015.1 | hypothetical protein | - |
| SSYIS1_RS14745 () | 1557881..1558486 | + | 606 | WP_197737016.1 | hypothetical protein | - |
| SSYIS1_RS07975 () | 1558622..1559041 | - | 420 | WP_037387954.1 | type II toxin-antitoxin system VapC family toxin | - |
| SSYIS1_RS07980 () | 1559041..1559295 | - | 255 | WP_006707989.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| SSYIS1_RS07985 () | 1559479..1560014 | + | 536 | Protein_1537 | phospholipase D family protein | - |
| SSYIS1_RS07990 () | 1560509..1561555 | + | 1047 | WP_149590724.1 | Replication protein | - |
| SSYIS1_RS08000 () | 1562534..1562863 | + | 330 | WP_006708768.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SSYIS1_RS08005 () | 1562844..1563125 | + | 282 | WP_006708767.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|