MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 149038 bp
Accession: NZ_AP019305 Location: 661776..810813 Organism: Staphylococcus aureus strain TUM9458 Replicon: chromosome
Accession: NZ_AP019305 Location: 661776..810813 Organism: Staphylococcus aureus strain TUM9458 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
EKM72_RS03625 () | 657737..659194 | - | 1458 | WP_000027919.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA | - |
EKM72_RS03630 () | 659196..659498 | - | 303 | WP_000170162.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC | - |
EKM72_RS03635 () | 659865..661403 | + | 1539 | WP_000957020.1 | sodium/proline symporter PutP | - |
EKM72_RS03640 () | 661492..662691 | - | 1200 | WP_000831700.1 | CamS family sex pheromone protein | - |
EKM72_RS03645 () | 662704..664707 | - | 2004 | WP_000774556.1 | NAD-dependent DNA ligase LigA | - |
EKM72_RS03650 () | 664711..666903 | - | 2193 | WP_000992924.1 | DNA helicase PcrA | - |
EKM72_RS03655 () | 666900..667592 | - | 693 | WP_000272056.1 | heptaprenylglyceryl phosphate synthase | - |
EKM72_RS03660 () | 667764..668066 | - | 303 | WP_001165363.1 | hypothetical protein | - |
EKM72_RS03665 () | 668175..669470 | - | 1296 | WP_000572878.1 | adenylosuccinate lyase | - |
EKM72_RS03675 () | 670318..671490 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
EKM72_RS03680 () | 671662..672828 | + | 1167 | WP_000827746.1 | Staphopain A | VF |
EKM72_RS03685 () | 672859..673185 | + | 327 | WP_000434933.1 | staphostatin A | - |
EKM72_RS03690 () | 673477..673650 | - | 174 | WP_000669862.1 | NETI motif-containing protein | - |
EKM72_RS03695 () | 673631..674233 | - | 603 | WP_000011542.1 | DUF2179 domain-containing protein | - |
EKM72_RS03700 () | 674504..675325 | - | 822 | WP_000040866.1 | ammonia-dependent NAD(+) synthetase | - |
EKM72_RS03705 () | 675318..676787 | - | 1470 | WP_000284436.1 | nicotinate phosphoribosyltransferase | - |
EKM72_RS03710 () | 676971..678047 | + | 1077 | WP_000897635.1 | nitric oxide synthase oxygenase | - |
EKM72_RS03715 () | 678067..678861 | + | 795 | WP_001177828.1 | prephenate dehydratase | - |
EKM72_RS03720 () | 678933..679040 | + | 108 | WP_001802312.1 | hypothetical protein | - |
EKM72_RS03725 () | 679051..680613 | - | 1563 | WP_000323161.1 | SLC13 family permease | - |
EKM72_RS03730 () | 680818..681915 | - | 1098 | WP_000275727.1 | pectate lyase | - |
EKM72_RS03735 () | 682284..682844 | + | 561 | WP_000149686.1 | Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | VF |
EKM72_RS03740 () | 682897..683826 | + | 930 | WP_001140871.1 | manganese-dependent inorganic pyrophosphatase | - |
EKM72_RS03745 () | 684019..684192 | - | 174 | WP_001792184.1 | hypothetical protein | - |
EKM72_RS03750 () | 684244..685623 | + | 1380 | WP_001021210.1 | aldehyde dehydrogenase | - |
EKM72_RS03755 () | 685743..686771 | - | 1029 | WP_000181315.1 | lactonase family protein | - |
EKM72_RS03760 () | 687041..687442 | + | 402 | WP_000205106.1 | YolD-like family protein | - |
EKM72_RS03765 () | 687460..687668 | - | 209 | Protein_686 | transposase | - |
EKM72_RS03770 () | 688015..688188 | - | 174 | WP_000267034.1 | hypothetical protein | - |
EKM72_RS03775 () | 688639..689679 | + | 1041 | WP_001188043.1 | linear amide C-N hydrolase | - |
EKM72_RS03780 () | 689736..690578 | - | 843 | WP_000713072.1 | DUF4097 family beta strand repeat protein | - |
EKM72_RS03785 () | 690575..691132 | - | 558 | WP_001033971.1 | DUF1700 domain-containing protein | - |
EKM72_RS03790 () | 691192..691716 | - | 525 | WP_000966288.1 | membrane protein | - |
EKM72_RS03795 () | 691837..692400 | + | 564 | WP_000182842.1 | thioredoxin family protein | - |
EKM72_RS03800 () | 692466..693206 | - | 741 | WP_001221651.1 | phenol-soluble modulin export ABC transporter permease subunit PmtD | - |
EKM72_RS03805 () | 693206..694078 | - | 873 | WP_000763043.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtC | - |
EKM72_RS03810 () | 694075..694755 | - | 681 | WP_000645727.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
EKM72_RS03815 () | 694756..695652 | - | 897 | WP_000991306.1 | ABC transporter ATP-binding protein NatA | VF |
EKM72_RS03820 () | 695649..696029 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
EKM72_RS03825 () | 696287..696463 | - | 177 | WP_000681968.1 | hypothetical protein | - |
EKM72_RS03830 () | 696706..696804 | - | 99 | WP_000990056.1 | hypothetical protein | - |
EKM72_RS03835 () | 697004..698290 | + | 1287 | WP_001068542.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
EKM72_RS03845 () | 698486..699658 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
EKM72_RS03855 () | 699901..700191 | - | 291 | WP_000671712.1 | Protein map | VF |
EKM72_RS03860 () | 700206..701636 | - | 1431 | WP_001557458.1 | Protein map | VF |
EKM72_RS03870 () | 702616..703575 | - | 960 | WP_002303350.1 | IS30 family transposase IS1062 | Transposase |
EKM72_RS03875 () | 703698..703838 | + | 141 | WP_048516856.1 | hypothetical protein | - |
EKM72_RS03885 () | 704153..704413 | + | 261 | WP_001791826.1 | hypothetical protein | - |
EKM72_RS03890 () | 704466..704816 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
EKM72_RS03895 () | 705499..705948 | + | 450 | WP_000727645.1 | Chemotaxis inhibitory protein | VF |
EKM72_RS03900 () | 706043..706377 | - | 335 | Protein_709 | SH3 domain-containing protein | - |
EKM72_RS03915 () | 707024..707515 | - | 492 | WP_000920042.1 | Staphylokinase | VF |
EKM72_RS03920 () | 707706..708461 | - | 756 | WP_000861026.1 | CHAP domain-containing protein | - |
EKM72_RS03925 () | 708473..708727 | - | 255 | WP_000611512.1 | phage holin | - |
EKM72_RS03930 () | 708779..708886 | + | 108 | WP_031762631.1 | hypothetical protein | - |
- () | 708808..708947 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
- () | 708808..708947 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
- () | 708808..708947 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
- () | 708808..708947 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
EKM72_RS03935 () | 708939..709115 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
EKM72_RS03940 () | 709318..710091 | - | 774 | WP_025174055.1 | Enterotoxin type E | VF |
EKM72_RS03945 () | 710313..711485 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
EKM72_RS03950 () | 711615..713054 | - | 1440 | WP_001028144.1 | Bifunctional AAC/APH | ARG |
EKM72_RS03955 () | 713055..713447 | - | 393 | WP_000393259.1 | GNAT family N-acetyltransferase | - |
EKM72_RS03960 () | 713504..714676 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
EKM72_RS03970 () | 715087..715461 | - | 375 | WP_000340977.1 | hypothetical protein | - |
EKM72_RS03975 () | 715517..715804 | - | 288 | WP_001262621.1 | hypothetical protein | - |
EKM72_RS03980 () | 715850..716002 | - | 153 | WP_001000058.1 | hypothetical protein | - |
EKM72_RS03985 () | 715995..719777 | - | 3783 | WP_000582152.1 | hypothetical protein | - |
EKM72_RS03990 () | 719793..721277 | - | 1485 | WP_000567396.1 | phage tail family protein | - |
EKM72_RS03995 () | 721274..725803 | - | 4530 | WP_084943896.1 | phage tail tape measure protein | - |
EKM72_RS15820 () | 725860..725997 | - | 138 | WP_001549167.1 | hypothetical protein | - |
EKM72_RS04000 () | 726048..726398 | - | 351 | WP_001096355.1 | hypothetical protein | - |
EKM72_RS04005 () | 726448..726672 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
EKM72_RS04010 () | 726714..727358 | - | 645 | WP_000268740.1 | phage tail protein | - |
EKM72_RS04015 () | 727359..727766 | - | 408 | WP_000565498.1 | hypothetical protein | - |
EKM72_RS04020 () | 727763..728167 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
EKM72_RS04025 () | 728164..728526 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
EKM72_RS04030 () | 728510..728794 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
EKM72_RS04035 () | 728784..729068 | - | 285 | WP_000238236.1 | hypothetical protein | - |
EKM72_RS04040 () | 729088..730233 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
EKM72_RS04045 () | 730257..730994 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
EKM72_RS04050 () | 730978..732165 | - | 1188 | WP_000025274.1 | phage portal protein | - |
EKM72_RS04055 () | 732181..733842 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
EKM72_RS04060 () | 733839..734183 | - | 345 | WP_000402904.1 | hypothetical protein | - |
EKM72_RS04065 () | 734314..734613 | - | 300 | WP_000988332.1 | HNH endonuclease | - |
EKM72_RS04070 () | 734845..735261 | - | 417 | WP_000590122.1 | hypothetical protein | - |
EKM72_RS04075 () | 735289..735489 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
EKM72_RS04080 () | 735489..735638 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
EKM72_RS04085 () | 735635..735841 | - | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
EKM72_RS04090 () | 735838..736083 | - | 246 | WP_001282077.1 | hypothetical protein | - |
EKM72_RS04095 () | 736120..736656 | - | 537 | WP_000185693.1 | dUTPase | - |
EKM72_RS04100 () | 736653..736898 | - | 246 | WP_001065108.1 | DUF1024 family protein | - |
EKM72_RS04105 () | 736913..737161 | - | 249 | WP_000178987.1 | hypothetical protein | - |
EKM72_RS04110 () | 737158..737415 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
EKM72_RS04115 () | 737415..737786 | - | 372 | WP_000101279.1 | hypothetical protein | - |
EKM72_RS04120 () | 737799..738203 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
EKM72_RS04125 () | 738212..738430 | - | 219 | WP_000338528.1 | hypothetical protein | - |
EKM72_RS04130 () | 738437..739330 | - | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
EKM72_RS04135 () | 739360..739830 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
EKM72_RS04140 () | 739831..740448 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
EKM72_RS04145 () | 740529..741449 | - | 921 | WP_042109507.1 | recombinase RecT | - |
EKM72_RS04150 () | 741451..743394 | - | 1944 | WP_001620112.1 | AAA family ATPase | - |
EKM72_RS04155 () | 743403..743666 | - | 264 | WP_001205732.1 | hypothetical protein | - |
EKM72_RS04160 () | 743675..743935 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
EKM72_RS04165 () | 743940..744242 | - | 303 | WP_042109511.1 | DUF2482 family protein | - |
EKM72_RS04170 () | 744337..744498 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
EKM72_RS04175 () | 744495..744818 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
EKM72_RS04180 () | 744873..745253 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
EKM72_RS04185 () | 745240..745437 | - | 198 | WP_001148856.1 | hypothetical protein | - |
EKM72_RS04190 () | 745453..746205 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
EKM72_RS04195 () | 746256..746585 | + | 330 | WP_000128909.1 | hypothetical protein | - |
EKM72_RS04200 () | 746574..746789 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
EKM72_RS04205 () | 746805..747068 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
EKM72_RS04210 () | 747065..747239 | - | 175 | Protein_769 | transcriptional regulator | - |
EKM72_RS04215 () | 747202..747915 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
EKM72_RS04220 () | 747931..748863 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
EKM72_RS04225 () | 748869..749210 | + | 342 | WP_000591749.1 | hypothetical protein | - |
EKM72_RS04230 () | 749414..749596 | + | 183 | WP_000694772.1 | hypothetical protein | - |
EKM72_RS04235 () | 749696..750679 | + | 984 | WP_001558608.1 | Putative teichuronic acid biosynthesis glycosyltransferase TuaG | VF |
EKM72_RS04240 () | 750690..750932 | + | 243 | WP_000427213.1 | hypothetical protein | - |
EKM72_RS04245 () | 750995..752032 | + | 1038 | WP_000857180.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
EKM72_RS04250 () | 752083..752913 | + | 831 | Protein_777 | Phospholipase C | VF |
EKM72_RS04255 () | 753151..754167 | - | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
EKM72_RS04260 () | 754189..755244 | - | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
EKM72_RS04265 () | 755680..756903 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
EKM72_RS04270 () | 757347..758654 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
EKM72_RS04285 () | 759829..761001 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
EKM72_RS04290 () | 761051..761725 | + | 675 | Protein_783 | Enterotoxin type A | VF |
EKM72_RS04295 () | 761894..762694 | - | 801 | WP_000278088.1 | Enterotoxin type C-3 | VF |
EKM72_RS04300 () | 763020..764192 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
EKM72_RS04305 () | 764814..765374 | + | 561 | WP_001035616.1 | DUF4888 domain-containing protein | - |
EKM72_RS04310 () | 766253..766957 | + | 705 | WP_001035599.1 | Toxic shock syndrome toxin-1 | VF |
EKM72_RS04315 () | 767112..767681 | - | 570 | WP_001293088.1 | terminase small subunit | - |
EKM72_RS04320 () | 767678..768019 | - | 342 | WP_000358774.1 | hypothetical protein | - |
EKM72_RS04325 () | 768022..768549 | - | 528 | WP_000771368.1 | spore coat protein | - |
EKM72_RS04330 () | 768600..768818 | - | 219 | WP_000448770.1 | capsid morphogenesis B protein | - |
EKM72_RS04335 () | 768836..769414 | - | 579 | WP_125571283.1 | pathogenicity island protein | - |
EKM72_RS04340 () | 769426..769767 | - | 342 | WP_001190615.1 | hypothetical protein | - |
EKM72_RS04345 () | 770217..770858 | - | 642 | WP_063663566.1 | pathogenicity island protein | - |
EKM72_RS04350 () | 770855..771235 | - | 381 | WP_000356942.1 | hypothetical protein | - |
EKM72_RS04355 () | 771545..773254 | - | 1710 | WP_000447473.1 | DUF927 domain-containing protein | - |
EKM72_RS04360 () | 773268..774137 | - | 870 | WP_001002689.1 | primase alpha helix C-terminal domain-containing protein | - |
EKM72_RS04365 () | 774202..774528 | - | 327 | WP_001078344.1 | DUF1474 family protein | Toxin Detail |
EKM72_RS04370 () | 774531..774680 | - | 150 | WP_025175789.1 | hypothetical protein | Antitoxin Detail |
EKM72_RS04375 () | 774733..774879 | - | 147 | WP_000784885.1 | hypothetical protein | - |
EKM72_RS04380 () | 774876..775193 | - | 318 | WP_000481967.1 | helix-turn-helix domain-containing protein | - |
EKM72_RS04385 () | 775198..775416 | - | 219 | WP_000153640.1 | helix-turn-helix transcriptional regulator | - |
EKM72_RS04390 () | 775589..776263 | + | 675 | WP_000620857.1 | helix-turn-helix transcriptional regulator | - |
EKM72_RS04395 () | 776277..777449 | + | 1173 | WP_000179343.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
EKM72_RS04400 () | 777518..779134 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
EKM72_RS04405 () | 779210..779494 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
EKM72_RS04410 () | 779669..780412 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
EKM72_RS04415 () | 780437..781684 | - | 1248 | WP_000120296.1 | hypothetical protein | VF |
EKM72_RS04420 () | 781881..782507 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
EKM72_RS04425 () | 782868..783653 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
EKM72_RS04430 () | 784253..784387 | - | 135 | WP_001549197.1 | Delta-hemolysin | VF |
EKM72_RS04435 () | 784623..785186 | + | 564 | WP_001105696.1 | accessory gene regulator ArgB-like protein | - |
EKM72_RS04440 () | 785189..785332 | + | 144 | WP_001094921.1 | cyclic lactone autoinducer peptide | - |
EKM72_RS04445 () | 785362..786645 | + | 1284 | WP_042109531.1 | GHKL domain-containing protein | - |
EKM72_RS04450 () | 786825..788144 | - | 1320 | WP_001557163.1 | ISL3 family transposase IS1181 | Transposase |
EKM72_RS04460 () | 788265..788900 | + | 636 | Protein_816 | response regulator transcription factor | - |
EKM72_RS04465 () | 788972..789081 | + | 110 | Protein_817 | hypothetical protein | - |
EKM72_RS04470 () | 789269..790228 | - | 960 | WP_001253312.1 | carbohydrate kinase | - |
EKM72_RS04475 () | 790225..791709 | - | 1485 | WP_000141432.1 | glycoside hydrolase family 32 protein | - |
EKM72_RS04480 () | 791858..792808 | - | 951 | WP_000790331.1 | LacI family DNA-binding transcriptional regulator | - |
EKM72_RS04485 () | 792991..794241 | - | 1251 | WP_001052270.1 | ammonium transporter | - |
EKM72_RS04490 () | 794449..794673 | - | 225 | WP_000581076.1 | sulfurtransferase TusA family protein | - |
EKM72_RS04495 () | 794733..795812 | - | 1080 | WP_000266884.1 | YeeE/YedE family protein | - |
EKM72_RS04500 () | 796116..796751 | - | 636 | WP_001283612.1 | redox-sensing transcriptional repressor Rex | - |
EKM72_RS04505 () | 797004..798932 | + | 1929 | WP_000602057.1 | ABC-F type ribosomal protection protein | - |
EKM72_RS04510 () | 799077..799205 | - | 129 | WP_001792272.1 | hypothetical protein | - |
EKM72_RS04515 () | 799294..800904 | + | 1611 | WP_000106332.1 | MutS family DNA mismatch repair protein | - |
EKM72_RS04520 () | 801219..802244 | - | 1026 | WP_000159041.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
EKM72_RS04525 () | 802237..802701 | - | 465 | WP_000372758.1 | N-alpha-acetyltransferase RimI | VF |
EKM72_RS04530 () | 802674..803336 | - | 663 | WP_001086737.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
EKM72_RS04535 () | 803317..803778 | - | 462 | WP_000590805.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
EKM72_RS04540 () | 803816..803971 | + | 156 | WP_001789600.1 | hypothetical protein | - |
EKM72_RS04545 () | 804289..805977 | + | 1689 | WP_001255780.1 | dihydroxy-acid dehydratase | - |
EKM72_RS04550 () | 806005..807774 | + | 1770 | WP_000047811.1 | biosynthetic-type acetolactate synthase large subunit | - |
EKM72_RS04555 () | 807774..808028 | + | 255 | WP_000196911.1 | ACT domain-containing protein | - |
EKM72_RS04560 () | 808150..809169 | + | 1020 | WP_072399972.1 | ketol-acid reductoisomerase | - |
EKM72_RS04565 () | 809199..810728 | + | 1530 | WP_000094583.1 | 2-isopropylmalate synthase | - |
EKM72_RS04570 () | 810731..811777 | + | 1047 | WP_000221945.1 | 3-isopropylmalate dehydrogenase | - |
EKM72_RS04575 () | 811791..813161 | + | 1371 | WP_000531823.1 | 3-isopropylmalate dehydratase large subunit | - |
EKM72_RS04580 () | 813162..813734 | + | 573 | WP_000718953.1 | 3-isopropylmalate dehydratase small subunit | - |
EKM72_RS04585 () | 813749..815017 | + | 1269 | WP_000216856.1 | threonine ammonia-lyase IlvA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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