MGE detailed information
MGE type: Prophage MGE length: 25512 bp
Accession: NZ_AP018920 Location: 1596308..1621819 Organism: Pseudonocardia autotrophica strain NBRC 12743 Replicon: chromosome
Accession: NZ_AP018920 Location: 1596308..1621819 Organism: Pseudonocardia autotrophica strain NBRC 12743 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Pdca_RS07685 () | 1593417..1593902 | + | 486 | WP_085916742.1 | CGNR zinc finger domain-containing protein | - |
| Pdca_RS07690 () | 1594290..1595924 | - | 1635 | WP_085916743.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| Pdca_RS07695 () | 1596308..1596751 | + | 444 | WP_158092379.1 | ANTAR domain-containing protein | - |
| Pdca_RS07700 () | 1596797..1597939 | - | 1143 | WP_197719946.1 | acyl-CoA desaturase | - |
| Pdca_RS07705 () | 1598752..1599459 | + | 708 | WP_125911298.1 | STAS domain-containing protein | - |
| Pdca_RS07710 () | 1599569..1599844 | + | 276 | WP_085916746.1 | hypothetical protein | - |
| Pdca_RS35385 () | 1600324..1600470 | + | 147 | WP_158092380.1 | hypothetical protein | - |
| Pdca_RS07715 () | 1600594..1601022 | - | 429 | WP_085916747.1 | hypothetical protein | - |
| Pdca_RS07720 () | 1601027..1601713 | - | 687 | WP_085916748.1 | DUF433 domain-containing protein | - |
| Pdca_RS07725 () | 1601947..1604325 | + | 2379 | WP_197719947.1 | DEAD/DEAH box helicase | - |
| Pdca_RS36005 () | 1604347..1604823 | + | 477 | WP_179956585.1 | IS3 family transposase ISAar44 | Transposase |
| Pdca_RS07735 () | 1604820..1605830 | + | 1011 | WP_125911267.1 | IS3 family transposase IS1141 | Transposase |
| Pdca_RS07740 () | 1606001..1607200 | + | 1200 | WP_125911669.1 | hypothetical protein ; Integrase | Integrase |
| Pdca_RS07750 () | 1607945..1608256 | - | 312 | WP_166665856.1 | IS3 family transposase IS1372 | Transposase |
| Pdca_RS07760 () | 1608717..1609034 | - | 318 | WP_085916917.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| Pdca_RS07765 () | 1609031..1609393 | - | 363 | WP_085916916.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| Pdca_RS07770 () | 1609493..1610344 | - | 852 | WP_125911303.1 | hypothetical protein | - |
| Pdca_RS07775 () | 1610390..1610965 | - | 576 | WP_085916914.1 | hypothetical protein | - |
| Pdca_RS07780 () | 1610970..1611359 | - | 390 | WP_085916913.1 | hypothetical protein | - |
| Pdca_RS36010 () | 1611605..1612081 | + | 477 | WP_179956585.1 | IS3 family transposase ISAar44 | Transposase |
| Pdca_RS07790 () | 1612078..1613088 | + | 1011 | WP_125911267.1 | IS3 family transposase IS1141 | Transposase |
| Pdca_RS07795 () | 1613392..1614864 | + | 1473 | WP_197720038.1 | IS1634 family transposase | - |
| Pdca_RS07800 () | 1614959..1615549 | - | 591 | WP_125911306.1 | nucleotidyltransferase | - |
| Pdca_RS07805 () | 1615549..1616514 | - | 966 | WP_085916905.1 | hypothetical protein | - |
| Pdca_RS07810 () | 1616570..1617124 | - | 555 | WP_158092394.1 | 7-cyano-7-deazaguanine synthase | - |
| Pdca_RS07815 () | 1617187..1617804 | - | 618 | WP_158092395.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| Pdca_RS07820 () | 1617909..1618271 | - | 363 | WP_085916908.1 | 6-carboxytetrahydropterin synthase | - |
| Pdca_RS07825 () | 1618877..1620337 | + | 1461 | WP_141287162.1 | IS1634 family transposase | - |
| Pdca_RS07830 () | 1620476..1620670 | - | 195 | WP_125911308.1 | hypothetical protein | - |
| Pdca_RS07835 () | 1620744..1620944 | - | 201 | WP_125911309.1 | hypothetical protein | - |
| Pdca_RS07840 () | 1621580..1621819 | + | 240 | WP_085916643.1 | IS701 family transposase ISSav2 | Transposase |
| Pdca_RS07845 () | 1621927..1622985 | - | 1059 | WP_085916649.1 | AraC family transcriptional regulator | - |
| Pdca_RS07850 () | 1623194..1623727 | + | 534 | WP_085916642.1 | DUF1641 domain-containing protein | - |
| Pdca_RS07855 () | 1623833..1624804 | + | 972 | WP_085916641.1 | hydrogenase | - |
| Pdca_RS07860 () | 1624859..1626466 | + | 1608 | WP_085916640.1 | nickel-dependent hydrogenase large subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|