MGE detailed information
MGE type: Conjugative plasmid MGE length: 75799 bp
Accession: NZ_AP018811 Location: 1..75799 Organism: Escherichia coli strain E2865 Replicon: plasmid pE2865-3
Accession: NZ_AP018811 Location: 1..75799 Organism: Escherichia coli strain E2865 Replicon: plasmid pE2865-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL389_RS30765 () | 1..858 | + | 858 | WP_126347167.1 | incFII family plasmid replication initiator RepA | - |
| EL389_RS30780 () | 1773..2042 | + | 270 | WP_000079939.1 | hypothetical protein | Antitoxin Detail |
| EL389_RS30785 () | 2039..2203 | + | 165 | WP_001388374.1 | hypothetical protein | Toxin Detail |
| EL389_RS30790 () | 2251..3174 | + | 924 | WP_001415483.1 | hypothetical protein | - |
| EL389_RS30800 () | 3616..3996 | + | 381 | WP_001696636.1 | HTH domain-containing protein | - |
| EL389_RS30805 () | 4108..4512 | + | 405 | Protein_6 | IS91 family transposase ISPps1 | Transposase |
| EL389_RS30810 () | 4619..5455 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| EL389_RS30815 () | 5455..6258 | - | 804 | WP_001082319.1 | hypothetical protein | ARG |
| EL389_RS30820 () | 6270..6518 | - | 249 | Protein_9 | Hin recombinase | - |
| EL389_RS30825 () | 6518..6655 | + | 138 | Protein_10 | transcriptional regulator | - |
| EL389_RS30830 () | 6643..7224 | + | 582 | Protein_11 | GNAT family N-acetyltransferase | - |
| EL389_RS30835 () | 7218..8417 | - | 1200 | WP_000804064.1 | Multidrug resistance protein MdtG | ARG |
| EL389_RS30840 () | 8523..9173 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| EL389_RS30845 () | 9205..9441 | - | 237 | WP_100007996.1 | relaxase | - |
| EL389_RS30850 () | 9495..10331 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| EL389_RS30855 () | 10331..11134 | - | 804 | WP_001082319.1 | hypothetical protein | ARG |
| EL389_RS30860 () | 11195..12010 | - | 816 | WP_001043260.1 | hypothetical protein | ARG |
| EL389_RS30870 () | 12347..12550 | + | 204 | WP_000131876.1 | hypothetical protein | - |
| EL389_RS30875 () | 12541..12762 | + | 222 | WP_001251694.1 | hypothetical protein | - |
| EL389_RS30880 () | 12997..13983 | - | 987 | WP_000852935.1 | hypothetical protein | Relaxase |
| EL389_RS30895 () | 15453..15788 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| EL389_RS30900 () | 16126..17106 | + | 981 | WP_001218107.1 | plasmid segregation protein ParM | - |
| EL389_RS30905 () | 17109..17531 | + | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| EL389_RS30920 () | 17955..18857 | + | 903 | WP_001386431.1 | DUF1281 domain-containing protein | - |
| EL389_RS30925 () | 18854..19165 | + | 312 | WP_032146222.1 | hypothetical protein | - |
| EL389_RS30930 () | 19242..19925 | + | 684 | WP_000086115.1 | DNA methylase | - |
| EL389_RS30935 () | 19926..20147 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| EL389_RS30940 () | 20161..20595 | + | 435 | WP_032297008.1 | DUF1380 family protein | - |
| EL389_RS32205 () | 20640..21410 | + | 771 | WP_032297009.1 | hypothetical protein | - |
| EL389_RS30960 () | 21949..22251 | + | 303 | WP_072115680.1 | antirestriction protein | - |
| EL389_RS30965 () | 22298..22720 | + | 423 | WP_000271739.1 | DUF1380 family protein | - |
| EL389_RS30970 () | 22717..22908 | + | 192 | WP_001027511.1 | hypothetical protein | - |
| EL389_RS32090 () | 23187..23435 | - | 249 | WP_071587243.1 | hypothetical protein | - |
| EL389_RS30980 () | 23950..24180 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| EL389_RS30985 () | 24232..25593 | + | 1362 | WP_015057111.1 | DUF3560 domain-containing protein | - |
| EL389_RS30990 () | 25640..26203 | + | 564 | WP_001462138.1 | class I SAM-dependent methyltransferase | - |
| EL389_RS31000 () | 26355..26609 | + | 255 | WP_072254791.1 | hypothetical protein | - |
| EL389_RS31020 () | 27082..27609 | + | 528 | WP_000290816.1 | single-stranded DNA-binding protein | - |
| EL389_RS31025 () | 27665..27898 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| EL389_RS31030 () | 27962..29920 | + | 1959 | WP_001696680.1 | ParB/RepB/Spo0J family partition protein | - |
| EL389_RS31035 () | 29975..30409 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| EL389_RS31040 () | 30406..31125 | + | 720 | WP_001387922.1 | plasmid SOS inhibition protein A | - |
| EL389_RS31045 () | 31125..31643 | + | 519 | WP_001178556.1 | hypothetical protein | - |
| - () | 31619..31753 | + | 135 | NuclAT_0 | - | - |
| - () | 31619..31753 | + | 135 | NuclAT_0 | - | - |
| - () | 31619..31753 | + | 135 | NuclAT_0 | - | - |
| - () | 31619..31753 | + | 135 | NuclAT_0 | - | - |
| EL389_RS31055 () | 31819..31980 | + | 162 | WP_001696677.1 | type I toxin-antitoxin system Hok family toxin | - |
| EL389_RS31060 () | 32072..32353 | + | 282 | WP_100007970.1 | hypothetical protein | - |
| EL389_RS32210 () | 32273..32528 | - | 256 | Protein_46 | hypothetical protein | - |
| EL389_RS31075 () | 32824..33147 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| EL389_RS31080 () | 33206..33448 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| EL389_RS31090 () | 33714..33962 | + | 249 | WP_071606928.1 | hypothetical protein | - |
| EL389_RS31110 () | 34433..34729 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| EL389_RS31115 () | 34838..35659 | + | 822 | WP_001234441.1 | DUF945 domain-containing protein | - |
| EL389_RS31120 () | 35956..36558 | - | 603 | WP_072205450.1 | hypothetical protein | VF |
| EL389_RS31125 () | 36879..37262 | + | 384 | WP_096198444.1 | relaxosome protein TraM | - |
| EL389_RS31130 () | 37449..38138 | + | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| EL389_RS31135 () | 38237..38632 | + | 396 | WP_096317752.1 | conjugal transfer relaxosome protein TraY | - |
| EL389_RS31140 () | 38665..39030 | + | 366 | WP_096317751.1 | type IV conjugative transfer system pilin TraA | - |
| EL389_RS31145 () | 39045..39356 | + | 312 | WP_024221560.1 | type IV conjugative transfer system protein TraL | - |
| EL389_RS31150 () | 39378..39944 | + | 567 | WP_061873499.1 | type IV conjugative transfer system protein TraE | - |
| EL389_RS31155 () | 39931..40659 | + | 729 | WP_061873500.1 | type-F conjugative transfer system secretin TraK | - |
| EL389_RS31160 () | 40659..42113 | + | 1455 | WP_061873501.1 | conjugal transfer protein TraB | - |
| EL389_RS31165 () | 42103..42663 | + | 561 | WP_047082765.1 | conjugal transfer protein TraP | - |
| EL389_RS31170 () | 42617..42970 | + | 354 | WP_096317643.1 | conjugal transfer protein TrbD | - |
| EL389_RS31175 () | 42963..43214 | + | 252 | WP_096317644.1 | conjugal transfer protein TrbG | - |
| EL389_RS31180 () | 43211..43726 | + | 516 | WP_100007971.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EL389_RS31185 () | 43861..44082 | + | 222 | WP_021532666.1 | conjugal transfer protein TraR | - |
| EL389_RS31190 () | 44075..44548 | + | 474 | WP_126347168.1 | hypothetical protein | - |
| EL389_RS31195 () | 44628..44846 | + | 219 | WP_000556754.1 | hypothetical protein | - |
| EL389_RS31200 () | 44874..45221 | + | 348 | WP_000802783.1 | hypothetical protein | - |
| EL389_RS31205 () | 45348..47978 | + | 2631 | WP_100007972.1 | type IV secretion system protein TraC | - |
| EL389_RS31210 () | 47975..48361 | + | 387 | WP_096317647.1 | type-F conjugative transfer system protein TrbI | - |
| EL389_RS31215 () | 48358..48990 | + | 633 | WP_062895536.1 | type-F conjugative transfer system protein TraW | - |
| EL389_RS31220 () | 48987..49979 | + | 993 | WP_096198454.1 | conjugal transfer pilus assembly protein TraU | - |
| EL389_RS31225 () | 50000..50179 | + | 180 | WP_100007973.1 | hypothetical protein | - |
| EL389_RS31230 () | 50235..50546 | + | 312 | WP_097725971.1 | hypothetical protein | - |
| EL389_RS31235 () | 50609..51130 | + | 522 | WP_100008949.1 | hypothetical protein | - |
| EL389_RS31240 () | 51157..51795 | + | 639 | WP_126347169.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EL389_RS31245 () | 51792..52163 | + | 372 | WP_100008946.1 | hypothetical protein | - |
| EL389_RS31250 () | 52189..52611 | + | 423 | WP_100007976.1 | HNH endonuclease | - |
| EL389_RS31255 () | 52608..54458 | + | 1851 | WP_100007977.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EL389_RS31260 () | 54485..54742 | + | 258 | WP_000864331.1 | conjugal transfer protein TrbE | - |
| EL389_RS31265 () | 54735..55478 | + | 744 | WP_126347170.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EL389_RS31270 () | 55492..55857 | + | 366 | WP_100007979.1 | hypothetical protein | - |
| EL389_RS31280 () | 56236..56517 | + | 282 | WP_000049684.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EL389_RS31285 () | 56504..57049 | + | 546 | WP_100007980.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EL389_RS31290 () | 56979..57326 | + | 348 | WP_072134219.1 | P-type conjugative transfer protein TrbJ | - |
| EL389_RS31295 () | 57274..57699 | + | 426 | WP_072134220.1 | F-type conjugal transfer protein TrbF | - |
| EL389_RS31300 () | 57686..59058 | + | 1373 | Protein_87 | conjugal transfer protein TraH | - |
| EL389_RS31305 () | 59055..61877 | + | 2823 | WP_100007981.1 | conjugal transfer mating pair stabilization protein TraG | - |
| EL389_RS31310 () | 61893..62378 | + | 486 | WP_100007982.1 | surface exclusion protein | - |
| EL389_RS31315 () | 62427..63158 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| EL389_RS31320 () | 63361..64098 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| EL389_RS31325 () | 64149..66419 | + | 2271 | WP_126347172.1 | type IV conjugative transfer system coupling protein TraD | - |
| EL389_RS31330 () | 66419..71689 | + | 5271 | WP_100007983.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| EL389_RS31335 () | 71709..72455 | + | 747 | WP_100007984.1 | conjugal transfer pilus acetylase TraX | - |
| EL389_RS31340 () | 72510..73070 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| EL389_RS31345 () | 73201..73413 | + | 213 | WP_032161968.1 | hypothetical protein | - |
| EL389_RS31350 () | 73659..74120 | + | 462 | WP_001233868.1 | thermonuclease family protein | - |
| EL389_RS31355 () | 74166..74374 | + | 209 | Protein_98 | hemolysin expression modulator Hha | - |
| EL389_RS31360 () | 74412..75002 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| EL389_RS31365 () | 75242..75496 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|