MGE detailed information
MGE type: Prophage MGE length: 78452 bp
Accession: NZ_AP018808 Location: 2461117..2539568 Organism: Escherichia coli strain E2865 Replicon: chromosome
Accession: NZ_AP018808 Location: 2461117..2539568 Organism: Escherichia coli strain E2865 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL389_RS13200 () | 2456973..2457773 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| EL389_RS13205 () | 2457786..2458637 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| EL389_RS13210 () | 2458692..2459150 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| EL389_RS13215 () | 2459579..2460145 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| EL389_RS13220 () | 2460142..2460951 | - | 810 | WP_000010107.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| EL389_RS13225 () | 2461117..2461326 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| EL389_RS13230 () | 2461339..2461482 | - | 144 | WP_001295496.1 | YobF family protein | - |
| EL389_RS13235 () | 2462151..2462438 | - | 288 | WP_001006866.1 | YebO family protein | - |
| EL389_RS13240 () | 2462513..2462656 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| EL389_RS13245 () | 2462815..2463054 | + | 240 | WP_001211011.1 | hypothetical protein | - |
| EL389_RS13250 () | 2463197..2463988 | - | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| EL389_RS13255 () | 2464165..2465538 | + | 1374 | WP_001127210.1 | MFS transporter | - |
| EL389_RS13260 () | 2465584..2466465 | - | 882 | WP_000984517.1 | protease HtpX | - |
| EL389_RS13265 () | 2466657..2468705 | - | 2049 | WP_001431407.1 | carboxy terminal-processing peptidase | - |
| EL389_RS13270 () | 2468725..2469423 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| EL389_RS13275 () | 2469520..2470017 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| EL389_RS13280 () | 2470147..2471430 | + | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| EL389_RS13285 () | 2471399..2474032 | + | 2634 | WP_001299674.1 | hypothetical protein | VF |
| EL389_RS13290 () | 2474112..2475551 | + | 1440 | WP_000057024.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| EL389_RS13295 () | 2475669..2475905 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| EL389_RS13300 () | 2476010..2476201 | + | 192 | WP_001296140.1 | YebW family protein | - |
| EL389_RS13305 () | 2476202..2476858 | - | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| EL389_RS13310 () | 2477543..2477809 | + | 267 | Protein_2541 | hypothetical protein | - |
| EL389_RS13315 () | 2477813..2478463 | + | 651 | WP_001121225.1 | hypothetical protein | VF |
| EL389_RS13325 () | 2478688..2479563 | - | 876 | WP_000491545.1 | hypothetical protein | VF |
| EL389_RS13330 () | 2479704..2479973 | - | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| EL389_RS13335 () | 2479975..2481288 | - | 1314 | WP_000268926.1 | ISNCY family transposase KIS | Transposase |
| EL389_RS13340 () | 2481353..2481952 | - | 600 | WP_001230428.1 | hypothetical protein | VF |
| EL389_RS13345 () | 2482008..2483546 | - | 1539 | WP_000099160.1 | IS66 family transposase ISEc22 | Transposase |
| EL389_RS13350 () | 2483595..2483942 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| EL389_RS13355 () | 2483939..2484343 | - | 405 | WP_000839165.1 | IS66 family transposase ISEc22 | Transposase |
| EL389_RS13360 () | 2484482..2487877 | - | 3396 | WP_000514713.1 | host specificity protein J | - |
| EL389_RS13365 () | 2488220..2488852 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| EL389_RS13370 () | 2488798..2489541 | - | 744 | WP_000194723.1 | C40 family peptidase | - |
| EL389_RS13375 () | 2489552..2490250 | - | 699 | WP_001357740.1 | phage minor tail protein L | - |
| EL389_RS13380 () | 2490250..2490579 | - | 330 | WP_000847298.1 | phage tail protein | - |
| EL389_RS13385 () | 2490576..2493187 | - | 2612 | Protein_2555 | phage tail tape measure protein | - |
| EL389_RS13390 () | 2493168..2493581 | - | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| EL389_RS13395 () | 2493608..2494030 | - | 423 | WP_000479045.1 | phage minor tail protein G | - |
| EL389_RS13400 () | 2494044..2494796 | - | 753 | WP_000235094.1 | Ig domain-containing protein | - |
| EL389_RS13405 () | 2494804..2495199 | - | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| EL389_RS13410 () | 2495196..2495774 | - | 579 | WP_126347123.1 | phage tail protein | - |
| EL389_RS13415 () | 2495786..2496139 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| EL389_RS13420 () | 2496151..2496546 | - | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| EL389_RS13425 () | 2496588..2497613 | - | 1026 | WP_000063258.1 | major capsid protein | - |
| EL389_RS13430 () | 2497669..2498001 | - | 333 | WP_001365129.1 | head decoration protein | - |
| EL389_RS13435 () | 2498011..2499330 | - | 1320 | WP_000123251.1 | S49 family peptidase | - |
| EL389_RS13440 () | 2499311..2500912 | - | 1602 | WP_001443752.1 | phage portal protein | - |
| EL389_RS13445 () | 2500909..2501115 | - | 207 | WP_000198153.1 | gpW family protein | - |
| EL389_RS13450 () | 2501112..2503037 | - | 1926 | WP_001027379.1 | phage terminase large subunit family protein | - |
| EL389_RS13455 () | 2503012..2503557 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| EL389_RS13460 () | 2503946..2504140 | + | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| EL389_RS13465 () | 2504328..2504945 | - | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| EL389_RS13470 () | 2505095..2505532 | - | 438 | WP_000092325.1 | lysis protein | - |
| EL389_RS13475 () | 2505529..2506026 | - | 498 | WP_000075132.1 | lysozyme RrrD | - |
| EL389_RS13480 () | 2506026..2506241 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| EL389_RS13485 () | 2506680..2508530 | - | 1851 | WP_000143049.1 | SASA family carbohydrate esterase | - |
| EL389_RS13490 () | 2508852..2509104 | - | 253 | Protein_2576 | DUF3927 family protein | - |
| EL389_RS13495 () | 2509101..2509463 | - | 363 | Protein_2577 | tellurite resistance TerB family protein | - |
| EL389_RS13500 () | 2509701..2510522 | - | 822 | WP_000762928.1 | antitermination protein | - |
| EL389_RS13505 () | 2510519..2510893 | - | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EL389_RS13510 () | 2510906..2511955 | - | 1050 | WP_126347124.1 | DUF968 domain-containing protein | - |
| EL389_RS13515 () | 2511957..2512229 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| EL389_RS13520 () | 2512351..2512695 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| EL389_RS13525 () | 2512815..2512970 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| EL389_RS13530 () | 2513261..2513818 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| EL389_RS13535 () | 2513820..2514038 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| EL389_RS13540 () | 2514166..2514477 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| EL389_RS13545 () | 2514470..2514697 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| EL389_RS13550 () | 2514694..2514975 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| EL389_RS13555 () | 2515008..2515769 | - | 762 | WP_000450872.1 | DUF1627 domain-containing protein | - |
| EL389_RS13560 () | 2515795..2516536 | - | 742 | Protein_2590 | ATP-binding protein | - |
| EL389_RS13565 () | 2516543..2517505 | - | 963 | WP_001444941.1 | helix-turn-helix domain-containing protein | - |
| EL389_RS13570 () | 2517528..2517953 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| EL389_RS13575 () | 2517950..2518252 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| EL389_RS13580 () | 2518350..2518721 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| EL389_RS13585 () | 2518742..2518933 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| EL389_RS13590 () | 2518935..2519213 | + | 279 | WP_001448501.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EL389_RS13595 () | 2519500..2519652 | + | 153 | WP_001427316.1 | DUF1391 family protein | - |
| EL389_RS13600 () | 2520073..2520294 | + | 222 | WP_000560218.1 | killing protein KilR | - |
| EL389_RS13605 () | 2520288..2520464 | + | 177 | WP_000245534.1 | hypothetical protein | - |
| EL389_RS13610 () | 2520538..2520813 | + | 276 | WP_001307773.1 | hypothetical protein | - |
| EL389_RS13615 () | 2520912..2523563 | + | 2652 | WP_000105101.1 | exodeoxyribonuclease VIII | - |
| EL389_RS13620 () | 2523556..2524365 | + | 810 | WP_000166317.1 | recombination protein RecT | - |
| EL389_RS13625 () | 2524422..2524616 | + | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| EL389_RS13630 () | 2524609..2524797 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 2524615..2524793 | - | 179 | NuclAT_1 | - | - |
| - () | 2524615..2524793 | - | 179 | NuclAT_1 | - | - |
| - () | 2524615..2524793 | - | 179 | NuclAT_1 | - | - |
| - () | 2524615..2524793 | - | 179 | NuclAT_1 | - | - |
| EL389_RS13635 () | 2524904..2525185 | + | 282 | WP_001443927.1 | excisionase | - |
| EL389_RS13640 () | 2525151..2526266 | + | 1116 | WP_001189092.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2526357..2526591 | + | 235 | - | - | Antitoxin Detail |
| - () | 2526358..2526461 | - | 104 | - | - | Toxin Detail |
| EL389_RS13645 () | 2526619..2526960 | - | 342 | WP_000976492.1 | YebY family protein | - |
| EL389_RS13650 () | 2526973..2527845 | - | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| EL389_RS13655 () | 2527849..2528223 | - | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| EL389_RS13660 () | 2528362..2528592 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| EL389_RS13665 () | 2528694..2529350 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| EL389_RS13670 () | 2529374..2530036 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| EL389_RS13675 () | 2530033..2532093 | - | 2061 | WP_000936951.1 | oligopeptidase B | - |
| EL389_RS13680 () | 2532302..2532961 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| EL389_RS13685 () | 2533288..2533644 | - | 357 | WP_001295500.1 | protein YebF | - |
| EL389_RS13690 () | 2533711..2534001 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| EL389_RS13695 () | 2534135..2535313 | + | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| EL389_RS13700 () | 2535369..2536010 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| EL389_RS13705 () | 2536047..2537858 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| EL389_RS13710 () | 2538093..2539568 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| EL389_RS13715 () | 2539906..2540775 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| EL389_RS13720 () | 2540903..2542345 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| EL389_RS13725 () | 2542405..2543247 | - | 843 | WP_000546440.1 | Nif3-like dinuclear metal center hexameric protein | - |
| EL389_RS13730 () | 2543270..2544109 | - | 840 | WP_126347125.1 | alpha/beta hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|