MGE detailed information
MGE type: Prophage MGE length: 63708 bp
Accession: NZ_AP018808 Location: 2114075..2177782 Organism: Escherichia coli strain E2865 Replicon: chromosome
Accession: NZ_AP018808 Location: 2114075..2177782 Organism: Escherichia coli strain E2865 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL389_RS11260 () | 2109797..2110108 | - | 312 | WP_000722571.1 | PTS sugar transporter subunit IIB | - |
| EL389_RS11265 () | 2110307..2111005 | + | 699 | WP_000577179.1 | GntR family transcriptional regulator | - |
| EL389_RS11270 () | 2111050..2111949 | - | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| EL389_RS11275 () | 2112144..2113331 | + | 1188 | WP_001054196.1 | efflux MFS transporter YdeE | - |
| EL389_RS11280 () | 2113458..2113553 | + | 96 | WP_000901367.1 | protein MgtS | - |
| EL389_RS32260 () | 2113553..2113657 | + | 105 | WP_211180496.1 | protein MgtT | - |
| EL389_RS11285 () | 2113772..2114062 | - | 291 | Protein_2145 | diguanylate cyclase DgcZ | - |
| EL389_RS11290 () | 2114075..2114772 | - | 698 | Protein_2146 | IS1 family transposase | - |
| EL389_RS11295 () | 2114827..2115438 | - | 612 | Protein_2147 | diguanylate cyclase DgcZ | - |
| EL389_RS11300 () | 2115693..2116085 | - | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| EL389_RS11305 () | 2116361..2116879 | + | 519 | WP_001024559.1 | 2-oxo-tetronate isomerase | - |
| EL389_RS11310 () | 2116924..2118969 | - | 2046 | WP_001341522.1 | peptidyl-dipeptidase Dcp | - |
| EL389_RS11315 () | 2119106..2119852 | + | 747 | WP_000636571.1 | hypothetical protein | VF |
| EL389_RS11320 () | 2119941..2120627 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EL389_RS11325 () | 2120805..2121008 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EL389_RS11330 () | 2121044..2122504 | - | 1461 | Protein_2154 | mannitol dehydrogenase family protein | - |
| EL389_RS11335 () | 2122593..2123876 | - | 1284 | Protein_2155 | MHS family MFS transporter YdfJ | - |
| EL389_RS11345 () | 2124479..2124592 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| EL389_RS11350 () | 2124661..2124894 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EL389_RS11355 () | 2125211..2125801 | + | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL389_RS11360 () | 2125899..2126474 | - | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| EL389_RS11365 () | 2126474..2129434 | - | 2961 | WP_001448491.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EL389_RS11370 () | 2129499..2130098 | - | 600 | WP_064579292.1 | hypothetical protein | VF |
| EL389_RS11375 () | 2130169..2133582 | - | 3414 | WP_000515505.1 | host specificity protein J | - |
| EL389_RS11380 () | 2133643..2134290 | - | 648 | WP_000741589.1 | tail assembly protein | - |
| EL389_RS11385 () | 2134188..2134931 | - | 744 | WP_032194412.1 | C40 family peptidase | - |
| EL389_RS11390 () | 2134937..2135635 | - | 699 | WP_032348552.1 | phage minor tail protein L | - |
| EL389_RS11395 () | 2135645..2135974 | - | 330 | WP_000447251.1 | phage tail protein | - |
| EL389_RS11400 () | 2135974..2139039 | - | 3066 | WP_000372024.1 | phage tail tape measure protein | - |
| EL389_RS11405 () | 2139011..2139340 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| EL389_RS11410 () | 2139349..2139735 | - | 387 | WP_001341514.1 | phage minor tail protein G | - |
| EL389_RS11415 () | 2139796..2140539 | - | 744 | WP_000211132.1 | Ig domain-containing protein | - |
| EL389_RS11420 () | 2140550..2140951 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| EL389_RS11425 () | 2140948..2141526 | - | 579 | WP_000677128.1 | phage tail protein | - |
| EL389_RS11430 () | 2141538..2141813 | - | 276 | WP_001283148.1 | DNA breaking-rejoining protein | - |
| EL389_RS11435 () | 2141806..2142129 | - | 324 | WP_001097041.1 | DUF2190 family protein | - |
| EL389_RS11440 () | 2142216..2144242 | - | 2027 | Protein_2175 | hypothetical protein | VF |
| EL389_RS11445 () | 2144187..2145695 | - | 1509 | WP_000985929.1 | phage portal protein | - |
| EL389_RS11450 () | 2145695..2145907 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| EL389_RS11455 () | 2145904..2147993 | - | 2090 | Protein_2178 | phage terminase large subunit family protein | - |
| EL389_RS11460 () | 2148002..2148541 | - | 540 | WP_000421825.1 | DUF1441 family protein | - |
| EL389_RS11465 () | 2149102..2149308 | - | 207 | WP_001031435.1 | hypothetical protein | - |
| EL389_RS11470 () | 2149609..2150019 | + | 411 | WP_000035577.1 | DUF1398 domain-containing protein | - |
| EL389_RS11475 () | 2150171..2150344 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EL389_RS11480 () | 2150516..2150671 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| EL389_RS11485 () | 2150751..2150816 | - | 66 | WP_122134696.1 | hypothetical protein | - |
| EL389_RS11490 () | 2150819..2151007 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| EL389_RS11495 () | 2151018..2151230 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EL389_RS11500 () | 2151593..2152090 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EL389_RS11505 () | 2152087..2152620 | - | 534 | WP_001092971.1 | lysozyme | - |
| EL389_RS11510 () | 2152617..2152928 | - | 312 | WP_000189915.1 | YdfR family protein | - |
| EL389_RS11515 () | 2152933..2153148 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EL389_RS32265 () | 2153368..2153538 | + | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| EL389_RS11520 () | 2153902..2154117 | - | 216 | WP_000066483.1 | cold shock-like protein CspB | - |
| EL389_RS11525 () | 2154418..2154630 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EL389_RS11530 () | 2154685..2154774 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| EL389_RS11535 () | 2155052..2155804 | - | 753 | WP_001047133.1 | antitermination protein | - |
| EL389_RS11540 () | 2155818..2156867 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EL389_RS11545 () | 2156869..2157147 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| EL389_RS11550 () | 2157214..2157465 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| EL389_RS11555 () | 2157682..2157837 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EL389_RS11560 () | 2157909..2158196 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EL389_RS11565 () | 2158196..2158435 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EL389_RS11570 () | 2158460..2158765 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| EL389_RS11575 () | 2158968..2159300 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| EL389_RS11580 () | 2159368..2160581 | + | 1214 | WP_162830411.1 | IS3 family transposase IS629 | Transposase |
| EL389_RS11590 () | 2161050..2162390 | - | 1341 | WP_000589012.1 | ISNCY family transposase ISCARN112 | Transposase |
| EL389_RS11595 () | 2162424..2162843 | - | 420 | WP_001151195.1 | DUF977 family protein | - |
| EL389_RS11600 () | 2162884..2163849 | - | 966 | WP_000054507.1 | hypothetical protein | - |
| EL389_RS11605 () | 2163830..2164351 | - | 522 | WP_000705349.1 | hypothetical protein | - |
| EL389_RS11610 () | 2164335..2164562 | - | 228 | WP_000476993.1 | transcriptional regulator | - |
| EL389_RS11615 () | 2164640..2165047 | + | 408 | WP_126347121.1 | helix-turn-helix domain-containing protein | - |
| EL389_RS11620 () | 2165240..2165395 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| EL389_RS11625 () | 2165397..2165972 | + | 576 | WP_000347171.1 | hypothetical protein | - |
| EL389_RS11630 () | 2166459..2166647 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EL389_RS11635 () | 2166644..2166835 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| EL389_RS11640 () | 2166929..2169400 | + | 2472 | WP_000048369.1 | exonuclease | - |
| EL389_RS11645 () | 2169473..2169565 | + | 93 | Protein_2216 | excisionase family protein | - |
| EL389_RS11650 () | 2169596..2171167 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| EL389_RS11655 () | 2171187..2171534 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EL389_RS11660 () | 2171534..2172211 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EL389_RS11665 () | 2172201..2172431 | + | 231 | Protein_2220 | excisionase family protein | - |
| EL389_RS11670 () | 2172466..2173746 | + | 1281 | WP_000877011.1 | hypothetical protein ; Integrase | Integrase |
| EL389_RS11680 () | 2173934..2174953 | - | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| EL389_RS11685 () | 2174965..2176179 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EL389_RS11690 () | 2176385..2176711 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| EL389_RS11695 () | 2176846..2177187 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EL389_RS11700 () | 2177222..2177782 | + | 561 | WP_001138576.1 | spermidine N1-acetyltransferase | - |
| EL389_RS11705 () | 2177785..2178495 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EL389_RS11710 () | 2178603..2178908 | + | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| EL389_RS11715 () | 2179107..2181532 | + | 2426 | Protein_2229 | dimethyl sulfoxide reductase subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|