MGE detailed information
MGE type: Prophage MGE length: 55814 bp
Accession: NZ_AP018808 Location: 1861252..1917065 Organism: Escherichia coli strain E2865 Replicon: chromosome
Accession: NZ_AP018808 Location: 1861252..1917065 Organism: Escherichia coli strain E2865 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL389_RS10010 () | 1856758..1858284 | - | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| EL389_RS10015 () | 1858321..1859766 | - | 1446 | WP_126347110.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| EL389_RS10020 () | 1859766..1861076 | - | 1311 | WP_000444947.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| EL389_RS10025 () | 1861252..1862160 | + | 909 | WP_000885467.1 | LysR family transcriptional regulator | - |
| EL389_RS10030 () | 1862490..1863053 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| EL389_RS10035 () | 1863074..1864306 | - | 1233 | WP_000628065.1 | diguanylate cyclase DgcM | - |
| EL389_RS32250 () | 1864500..1864547 | + | 48 | WP_211180494.1 | protein YnaN | - |
| EL389_RS10040 () | 1864561..1865544 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| EL389_RS10045 () | 1866022..1867395 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| EL389_RS10050 () | 1867524..1868459 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| EL389_RS10055 () | 1868511..1869746 | - | 1236 | WP_000040851.1 | hypothetical protein ; Integrase | Integrase |
| EL389_RS10060 () | 1869748..1869963 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| EL389_RS10065 () | 1870063..1870251 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1870067..1870245 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1870067..1870245 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1870067..1870245 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1870067..1870245 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| EL389_RS10070 () | 1870289..1870438 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| EL389_RS10075 () | 1870494..1871303 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| EL389_RS10080 () | 1871296..1873896 | - | 2601 | WP_000105151.1 | exodeoxyribonuclease VIII | - |
| EL389_RS10085 () | 1873998..1874273 | - | 276 | WP_000632297.1 | protein RacC | - |
| EL389_RS10090 () | 1874348..1874518 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| EL389_RS10095 () | 1874518..1874739 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| EL389_RS10100 () | 1875160..1875312 | - | 153 | WP_001427316.1 | DUF1391 family protein | - |
| EL389_RS10110 () | 1875611..1876030 | - | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| EL389_RS10115 () | 1876110..1876364 | + | 255 | WP_001072343.1 | hypothetical protein | - |
| EL389_RS10120 () | 1876361..1876783 | + | 423 | WP_000693802.1 | hypothetical protein | - |
| EL389_RS10125 () | 1876847..1877326 | + | 480 | WP_001432368.1 | YdaU family protein | - |
| EL389_RS10135 () | 1878598..1878965 | + | 368 | Protein_1921 | DUF1376 domain-containing protein | - |
| EL389_RS10140 () | 1878972..1879718 | + | 747 | WP_000788968.1 | ATP-binding protein | - |
| EL389_RS10145 () | 1879741..1880502 | + | 762 | WP_000450672.1 | DUF1627 domain-containing protein | - |
| EL389_RS10150 () | 1880518..1880940 | + | 423 | WP_001151124.1 | DUF977 family protein | - |
| EL389_RS10155 () | 1880937..1881233 | + | 297 | WP_001266134.1 | DUF4406 domain-containing protein | - |
| EL389_RS10160 () | 1881230..1881691 | + | 462 | WP_001209480.1 | ead/Ea22-like family protein | - |
| EL389_RS10165 () | 1881669..1882025 | + | 357 | WP_000403777.1 | hypothetical protein | - |
| EL389_RS10170 () | 1882076..1882288 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| EL389_RS10175 () | 1882321..1882538 | + | 218 | Protein_1929 | DUF4014 family protein | - |
| EL389_RS10180 () | 1882540..1882803 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| EL389_RS10185 () | 1882814..1883683 | + | 870 | WP_000207986.1 | DUF551 domain-containing protein | - |
| EL389_RS10190 () | 1883799..1883903 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| EL389_RS10195 () | 1884149..1884304 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EL389_RS10200 () | 1884407..1884724 | - | 318 | WP_000042395.1 | DNA-binding transcriptional regulator | - |
| EL389_RS10205 () | 1884717..1885088 | - | 372 | WP_001217944.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EL389_RS10210 () | 1885312..1885539 | + | 228 | WP_001452497.1 | hypothetical protein | - |
| EL389_RS10215 () | 1885593..1885862 | + | 270 | WP_012817785.1 | hypothetical protein | - |
| EL389_RS10220 () | 1885864..1886913 | + | 1050 | WP_064579313.1 | DUF968 domain-containing protein | - |
| EL389_RS10225 () | 1886926..1887285 | + | 360 | WP_000904154.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EL389_RS10230 () | 1887294..1887824 | + | 531 | WP_021568736.1 | DUF1133 family protein | - |
| EL389_RS10235 () | 1888066..1888263 | + | 198 | WP_000917764.1 | hypothetical protein | - |
| EL389_RS10240 () | 1888398..1889111 | + | 714 | WP_126347111.1 | helix-turn-helix domain-containing protein | - |
| EL389_RS10255 () | 1889563..1889994 | + | 432 | WP_126347112.1 | tellurite resistance TerB family protein | - |
| EL389_RS10260 () | 1889991..1890246 | + | 256 | Protein_1944 | DUF3927 family protein | - |
| EL389_RS10265 () | 1890472..1892325 | + | 1854 | WP_000023192.1 | SASA family carbohydrate esterase | - |
| EL389_RS10270 () | 1892475..1892690 | + | 216 | WP_000284518.1 | class II holin family protein | - |
| EL389_RS10275 () | 1892694..1893485 | + | 792 | WP_001041949.1 | DUF1327 domain-containing protein | - |
| EL389_RS10280 () | 1893997..1894530 | + | 534 | WP_001092913.1 | lysozyme | - |
| EL389_RS31920 () | 1894690..1894827 | + | 138 | WP_000459345.1 | hypothetical protein | - |
| EL389_RS10290 () | 1895049..1895234 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| EL389_RS10295 () | 1895736..1896281 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| EL389_RS10300 () | 1896256..1898181 | + | 1926 | WP_001027230.1 | phage terminase large subunit family protein | - |
| EL389_RS10305 () | 1898178..1898384 | + | 207 | WP_000198153.1 | gpW family protein | - |
| EL389_RS10310 () | 1898381..1899982 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| EL389_RS10315 () | 1899963..1901282 | + | 1320 | WP_000123251.1 | S49 family peptidase | - |
| EL389_RS10320 () | 1901292..1901624 | + | 333 | WP_001365129.1 | head decoration protein | - |
| EL389_RS10325 () | 1901680..1902705 | + | 1026 | WP_000063265.1 | major capsid protein | - |
| EL389_RS10330 () | 1902747..1903142 | + | 396 | WP_000158901.1 | DNA-packaging protein FI | - |
| EL389_RS10335 () | 1903154..1903507 | + | 354 | WP_000752969.1 | head-tail joining protein | - |
| EL389_RS10340 () | 1903522..1904055 | + | 534 | WP_000975020.1 | phage tail protein | - |
| EL389_RS10345 () | 1904052..1904447 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| EL389_RS10350 () | 1904455..1905207 | + | 753 | WP_000235099.1 | Ig domain-containing protein | - |
| EL389_RS10355 () | 1905221..1905643 | + | 423 | WP_126347113.1 | phage minor tail protein G | - |
| EL389_RS10360 () | 1905670..1906083 | + | 414 | WP_000533442.1 | phage tail assembly protein T | - |
| EL389_RS10365 () | 1906064..1908676 | + | 2613 | WP_000081787.1 | phage tail tape measure protein | - |
| EL389_RS10370 () | 1908673..1909002 | + | 330 | WP_000847298.1 | phage tail protein | - |
| EL389_RS10375 () | 1909002..1909700 | + | 699 | WP_001369426.1 | phage minor tail protein L | - |
| EL389_RS10380 () | 1909706..1910449 | + | 744 | WP_062871854.1 | C40 family peptidase | - |
| EL389_RS10385 () | 1910395..1911027 | + | 633 | WP_126347160.1 | tail assembly protein | - |
| EL389_RS10390 () | 1911273..1914749 | + | 3477 | WP_126347114.1 | host specificity protein J | - |
| EL389_RS10395 () | 1914817..1915416 | + | 600 | WP_001233130.1 | hypothetical protein | VF |
| EL389_RS10400 () | 1915481..1916794 | + | 1314 | WP_000268927.1 | ISNCY family transposase KIS | Transposase |
| EL389_RS10405 () | 1916796..1917065 | + | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| EL389_RS10410 () | 1917178..1917753 | + | 576 | WP_109042728.1 | DUF1076 domain-containing protein | - |
| EL389_RS10415 () | 1917826..1918455 | + | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| EL389_RS10420 () | 1918537..1919178 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| EL389_RS10430 () | 1920119..1920553 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| EL389_RS10435 () | 1920694..1921827 | - | 1134 | WP_000837943.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|