MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 109617 bp
Accession: NZ_AP018688 Location: 1..109617 Organism: Vibrio rumoiensis strain FERM P-14531 Replicon: plasmid 2
Accession: NZ_AP018688 Location: 1..109617 Organism: Vibrio rumoiensis strain FERM P-14531 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VRUMOI_RS18740 () | 512..3241 | + | 2730 | WP_089138966.1 | AAA family ATPase | - |
| VRUMOI_RS18745 () | 3238..4347 | + | 1110 | WP_089138967.1 | hypothetical protein | - |
| VRUMOI_RS18750 () | 4360..5892 | + | 1533 | WP_089138968.1 | phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein | - |
| VRUMOI_RS18755 () | 5895..7340 | + | 1446 | WP_089138969.1 | Regulatory protein LuxO | VF |
| VRUMOI_RS19340 () | 7553..7702 | + | 150 | WP_162598465.1 | hypothetical protein | - |
| VRUMOI_RS18760 () | 8480..9168 | - | 689 | Protein_5 | IS3 family transposase ISLpn8 | Transposase |
| VRUMOI_RS18770 () | 9654..12497 | + | 2844 | WP_089138971.1 | hypothetical protein | - |
| VRUMOI_RS18775 () | 12491..12634 | + | 144 | Protein_7 | DNA-binding protein | - |
| VRUMOI_RS18780 () | 13313..13657 | + | 345 | WP_089138972.1 | hypothetical protein | - |
| VRUMOI_RS18785 () | 13659..16157 | + | 2499 | WP_089138973.1 | Hsp70 family protein | - |
| VRUMOI_RS18790 () | 16161..17513 | + | 1353 | WP_089138974.1 | AAA family ATPase | - |
| VRUMOI_RS18795 () | 17515..19134 | + | 1620 | WP_089138975.1 | hypothetical protein | - |
| VRUMOI_RS18800 () | 19790..19996 | + | 207 | WP_089138980.1 | peptidoglycan-binding protein | - |
| VRUMOI_RS18805 () | 20037..20846 | - | 810 | WP_162598466.1 | RsiV family protein | - |
| VRUMOI_RS18810 () | 22121..23182 | + | 1062 | WP_089138977.1 | tyrosine-type recombinase/integrase | - |
| VRUMOI_RS18815 () | 23575..23832 | + | 258 | WP_027695182.1 | antitoxin | Antitoxin Detail |
| VRUMOI_RS18820 () | 23819..24115 | + | 297 | WP_027695183.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VRUMOI_RS18825 () | 24586..25755 | - | 1170 | WP_162598467.1 | group II intron reverse transcriptase/maturase | - |
| VRUMOI_RS18830 () | 26117..26725 | + | 609 | WP_040223437.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| VRUMOI_RS18835 () | 26722..26907 | - | 186 | WP_024562121.1 | ribbon-helix-helix domain-containing protein | - |
| VRUMOI_RS18840 () | 27384..28388 | - | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| VRUMOI_RS18845 () | 28467..29975 | - | 1509 | Protein_21 | Tn3-like element ISPa38 family transposase | - |
| VRUMOI_RS18850 () | 30228..30788 | - | 561 | WP_002718009.1 | chlorite dismutase family protein | - |
| VRUMOI_RS18855 () | 31151..31603 | - | 453 | Protein_23 | DUF4158 domain-containing protein | - |
| VRUMOI_RS18860 () | 31762..32052 | + | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| VRUMOI_RS18865 () | 32049..32450 | + | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| VRUMOI_RS18870 () | 32440..32796 | + | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| VRUMOI_RS18875 () | 33051..33377 | + | 327 | WP_003100858.1 | hypothetical protein | - |
| VRUMOI_RS18880 () | 33374..33874 | + | 501 | WP_003100856.1 | hypothetical protein | - |
| VRUMOI_RS18885 () | 33871..34242 | + | 372 | WP_003100853.1 | hypothetical protein | - |
| VRUMOI_RS18890 () | 34236..34793 | + | 558 | WP_003100847.1 | recombinase family protein | - |
| VRUMOI_RS18895 () | 34872..35876 | + | 1005 | WP_032426534.1 | IS110 family transposase IS5075 | Transposase |
| VRUMOI_RS18900 () | 36244..36531 | - | 288 | WP_099156415.1 | hypothetical protein | - |
| VRUMOI_RS18905 () | 36556..36780 | - | 225 | WP_024152270.1 | hypothetical protein | - |
| VRUMOI_RS18915 () | 37409..40387 | - | 2979 | WP_014979375.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| VRUMOI_RS18925 () | 41308..42348 | - | 1041 | WP_089139185.1 | IS110 family transposase ISCps1 | Transposase |
| VRUMOI_RS18930 () | 42660..44132 | + | 1473 | WP_089139186.1 | group II intron reverse transcriptase/maturase | - |
| VRUMOI_RS18935 () | 44404..47322 | + | 2919 | WP_089139187.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| VRUMOI_RS18945 () | 48136..48867 | - | 732 | Protein_38 | IS1634 family transposase ISSpu7 | Transposase |
| VRUMOI_RS18950 () | 49053..50459 | - | 1407 | WP_089139189.1 | IS66 family transposase ISAs21 | Transposase |
| VRUMOI_RS18955 () | 50674..52599 | + | 1926 | WP_089139190.1 | PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR | - |
| VRUMOI_RS18960 () | 52678..55077 | - | 2400 | WP_089139191.1 | phosphoenolpyruvate--protein phosphotransferase | - |
| VRUMOI_RS18965 () | 55079..55714 | - | 636 | WP_005379705.1 | dihydroxyacetone kinase ADP-binding subunit DhaL | - |
| VRUMOI_RS18970 () | 55730..56788 | - | 1059 | WP_027695153.1 | dihydroxyacetone kinase subunit DhaK | - |
| VRUMOI_RS18975 () | 57142..58224 | + | 1083 | WP_006742744.1 | glycerol dehydrogenase | - |
| VRUMOI_RS18980 () | 58275..59429 | - | 1155 | WP_162598464.1 | heavy metal sensor histidine kinase | - |
| VRUMOI_RS19345 () | 59461..60354 | - | 894 | Protein_46 | IS1634 family transposase ISSpu7 | Transposase |
| VRUMOI_RS18985 () | 60447..60680 | - | 234 | WP_089139192.1 | hypothetical protein | - |
| VRUMOI_RS18990 () | 61269..61532 | + | 264 | WP_089139193.1 | hypothetical protein | - |
| VRUMOI_RS18995 () | 61686..62630 | - | 945 | WP_089139194.1 | hypothetical protein | - |
| VRUMOI_RS19000 () | 62719..63870 | + | 1152 | Protein_50 | IS3 family transposase ISVisp3 | Transposase |
| VRUMOI_RS19005 () | 65057..66418 | + | 1362 | WP_027695125.1 | C4-dicarboxylate transporter DcuC | - |
| VRUMOI_RS19010 () | 66446..67804 | + | 1359 | WP_089139918.1 | adenylosuccinate lyase family protein | - |
| VRUMOI_RS19015 () | 67804..69489 | + | 1686 | WP_089139919.1 | NAD-dependent malic enzyme | - |
| VRUMOI_RS19020 () | 69577..70458 | - | 882 | WP_089139920.1 | MurR/RpiR family transcriptional regulator | - |
| VRUMOI_RS19025 () | 71064..72509 | - | 1446 | WP_089139921.1 | IS66 family transposase ISVch7 | Transposase |
| VRUMOI_RS19030 () | 72866..73861 | + | 996 | WP_089139922.1 | substrate-binding domain-containing protein | - |
| VRUMOI_RS19035 () | 73951..74736 | - | 786 | WP_089139923.1 | hypothetical protein | - |
| VRUMOI_RS19040 () | 74726..76135 | - | 1410 | WP_110410729.1 | IS4 family transposase ISPrst1 | Transposase |
| VRUMOI_RS19045 () | 76228..76815 | - | 588 | Protein_59 | gluconate transporter | - |
| VRUMOI_RS19050 () | 76955..77512 | + | 558 | WP_038149440.1 | gluconokinase | - |
| VRUMOI_RS19055 () | 77526..79316 | + | 1791 | WP_162598471.1 | phosphogluconate dehydratase | - |
| VRUMOI_RS19060 () | 79407..80036 | + | 630 | WP_089138979.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| VRUMOI_RS19065 () | 80206..80673 | - | 468 | WP_089138943.1 | hypothetical protein | - |
| VRUMOI_RS19070 () | 80910..81485 | + | 576 | WP_162598468.1 | DUF2913 family protein | - |
| VRUMOI_RS19075 () | 81482..82225 | - | 744 | WP_089138945.1 | M48 family metallopeptidase | - |
| VRUMOI_RS19080 () | 82248..85460 | - | 3213 | WP_089138946.1 | type I restriction endonuclease subunit R | - |
| VRUMOI_RS19085 () | 85606..86265 | - | 660 | WP_089138947.1 | hypothetical protein | - |
| VRUMOI_RS19090 () | 86252..87118 | - | 867 | WP_089138948.1 | hypothetical protein | - |
| VRUMOI_RS19095 () | 87131..88186 | - | 1056 | WP_089138949.1 | Fic family protein | - |
| VRUMOI_RS19100 () | 88188..89438 | - | 1251 | WP_089138950.1 | restriction endonuclease subunit S | - |
| VRUMOI_RS19105 () | 89431..91209 | - | 1779 | WP_089138951.1 | type I restriction-modification system subunit M | - |
| VRUMOI_RS19110 () | 95030..95272 | - | 243 | Protein_72 | DUF3387 domain-containing protein | - |
| VRUMOI_RS19115 () | 95369..95860 | - | 492 | WP_162598469.1 | hypothetical protein | - |
| VRUMOI_RS19125 () | 96419..97489 | - | 1071 | WP_174208835.1 | replication initiation protein | - |
| VRUMOI_RS19350 () | 98253..98390 | - | 138 | WP_156888664.1 | hypothetical protein | - |
| VRUMOI_RS19130 () | 98457..99713 | - | 1257 | WP_089138956.1 | Y-family DNA polymerase | - |
| VRUMOI_RS19135 () | 99714..100112 | - | 399 | WP_027695145.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| VRUMOI_RS19140 () | 100271..100639 | + | 369 | WP_089138957.1 | hypothetical protein | - |
| VRUMOI_RS19145 () | 101229..102296 | - | 1068 | WP_089138958.1 | replication initiation protein | - |
| VRUMOI_RS19150 () | 102726..102851 | + | 126 | Protein_80 | IS5 family transposase | - |
| VRUMOI_RS19155 () | 103246..104424 | - | 1179 | WP_089138959.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| VRUMOI_RS19160 () | 104489..104899 | + | 411 | WP_107922914.1 | IS200-IS605 family transposase ISAs26 | Transposase |
| VRUMOI_RS19165 () | 104966..105277 | + | 312 | WP_089138961.1 | hypothetical protein | - |
| VRUMOI_RS19170 () | 105249..105899 | + | 651 | WP_089138962.1 | IS1595 family transposase ISPssp3 | Transposase |
| VRUMOI_RS19175 () | 105988..106164 | + | 177 | WP_162598470.1 | hypothetical protein | - |
| VRUMOI_RS19180 () | 106279..107226 | - | 948 | WP_041155238.1 | IS30 family transposase ISSde3 | Transposase |
| VRUMOI_RS19185 () | 107339..108418 | - | 1080 | WP_089138964.1 | ParB/RepB/Spo0J family partition protein | - |
| VRUMOI_RS19190 () | 108418..109617 | - | 1200 | WP_089138965.1 | ParA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|