MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 16253 bp
Accession: NZ_AP018683 Location: 1..16253 Organism: Vibrio casei strain DSM 22364 Replicon: plasmid 2
Accession: NZ_AP018683 Location: 1..16253 Organism: Vibrio casei strain DSM 22364 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VCASEI_RS19230 () | 944..1168 | + | 225 | WP_089111021.1 | TraY domain-containing protein | Antitoxin Detail |
| VCASEI_RS19235 () | 1152..1415 | + | 264 | WP_089111020.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VCASEI_RS19240 () | 1520..1804 | - | 285 | WP_089111019.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| VCASEI_RS19245 () | 1794..2033 | - | 240 | WP_089111018.1 | CopG family ribbon-helix-helix protein | - |
| VCASEI_RS19250 () | 2190..2525 | - | 336 | Protein_4 | IS5 family transposase IS5D | Transposase |
| VCASEI_RS19265 () | 3085..4263 | + | 1179 | WP_001572339.1 | FMN-dependent L-lactate dehydrogenase LldD | - |
| VCASEI_RS19275 () | 5352..6227 | - | 876 | Protein_6 | IS3 family transposase ISEcl1 | Transposase |
| VCASEI_RS19285 () | 6472..8700 | + | 2229 | Protein_7 | Tn3 family transposase ISKox2 | Transposase |
| VCASEI_RS19290 () | 8764..9914 | + | 1151 | WP_110957783.1 | IS3 family transposase ISVal2 | Transposase |
| VCASEI_RS19295 () | 9941..10702 | + | 762 | Protein_9 | Tn3 family transposase ISKox2 | Transposase |
| VCASEI_RS19300 () | 11013..11423 | - | 411 | WP_107928099.1 | IS200-IS605 family transposase ISAs26 | Transposase |
| VCASEI_RS19305 () | 11488..12666 | + | 1179 | WP_110957887.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| VCASEI_RS19310 () | 12789..13022 | + | 234 | WP_089111026.1 | hypothetical protein | - |
| VCASEI_RS19315 () | 13144..13383 | + | 240 | WP_089111025.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| VCASEI_RS19320 () | 13373..13657 | + | 285 | WP_089111024.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| VCASEI_RS19325 () | 13781..14224 | - | 444 | WP_089111023.1 | DUF3950 domain-containing protein | - |
| VCASEI_RS19330 () | 14851..15213 | - | 363 | WP_193002453.1 | hypothetical protein | - |
| VCASEI_RS19335 () | 15219..16169 | - | 951 | WP_089111022.1 | integrase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|