MGE detailed information
MGE type: Prophage MGE length: 51139 bp
Accession: NZ_AP018680 Location: 382338..433476 Organism: Vibrio casei strain DSM 22364 Replicon: chromosome
Accession: NZ_AP018680 Location: 382338..433476 Organism: Vibrio casei strain DSM 22364 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VCASEI_RS01810 () | 377420..379390 | + | 1971 | WP_086962936.1 | DNA mismatch repair endonuclease MutL | - |
| VCASEI_RS01815 () | 379387..380319 | + | 933 | WP_086962934.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| VCASEI_RS01820 () | 380673..380951 | + | 279 | WP_086962932.1 | RNA chaperone Hfq | - |
| VCASEI_RS01825 () | 381002..382309 | + | 1308 | WP_086962930.1 | GTPase HflX | - |
| VCASEI_RS01830 () | 382338..383528 | + | 1191 | WP_086962928.1 | FtsH protease activity modulator HflK | - |
| VCASEI_RS01835 () | 383531..384514 | + | 984 | WP_086962926.1 | protease modulator HflC | - |
| VCASEI_RS01840 () | 384621..384794 | + | 174 | WP_170924607.1 | DUF2065 domain-containing protein | - |
| VCASEI_RS01845 () | 385097..386413 | + | 1317 | WP_086962924.1 | adenylosuccinate synthase | - |
| VCASEI_RS01850 () | 386485..387648 | - | 1164 | WP_089110321.1 | NO-inducible flavohemoprotein | - |
| VCASEI_RS01855 () | 387761..388186 | + | 426 | WP_086962920.1 | nitric oxide-sensing transcriptional repressor NsrR | - |
| VCASEI_RS01860 () | 388306..390792 | + | 2487 | WP_089110320.1 | ribonuclease R | - |
| VCASEI_RS01865 () | 390862..391611 | + | 750 | WP_086962916.1 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | - |
| VCASEI_RS01870 () | 391860..392255 | + | 396 | WP_086962915.1 | 30S ribosomal protein S6 | - |
| VCASEI_RS01875 () | 392264..392566 | + | 303 | WP_086962913.1 | primosomal replication protein N | - |
| VCASEI_RS01880 () | 392583..392810 | + | 228 | WP_000090472.1 | 30S ribosomal protein S18 | - |
| VCASEI_RS01885 () | 392849..393301 | + | 453 | WP_086962912.1 | 50S ribosomal protein L9 | - |
| VCASEI_RS01890 () | 393427..394476 | - | 1050 | WP_089110338.1 | DUF481 domain-containing protein | - |
| VCASEI_RS01895 () | 394680..396074 | + | 1395 | WP_086962910.1 | replicative DNA helicase | - |
| VCASEI_RS01900 () | 396159..397244 | + | 1086 | WP_086962907.1 | alanine racemase | - |
| VCASEI_RS01905 () | 397279..398589 | + | 1311 | WP_170924606.1 | hypothetical protein | - |
| VCASEI_RS01910 () | 398838..400490 | + | 1653 | WP_086962905.1 | glucose-6-phosphate isomerase | - |
| VCASEI_RS01915 () | 400599..401054 | - | 456 | WP_027695410.1 | zinc uptake transcriptional repressor Zur | - |
| VCASEI_RS01920 () | 401352..402395 | - | 1044 | WP_089110319.1 | site-specific DNA-methyltransferase | - |
| VCASEI_RS01925 () | 402598..404499 | - | 1902 | WP_089110318.1 | hypothetical protein | - |
| VCASEI_RS01930 () | 404560..404664 | - | 105 | WP_197709575.1 | GpE family phage tail protein | - |
| VCASEI_RS01935 () | 404703..404972 | - | 270 | WP_089110316.1 | phage tail assembly protein | - |
| VCASEI_RS01940 () | 404965..405615 | - | 651 | WP_089110337.1 | hypothetical protein | - |
| VCASEI_RS01945 () | 405908..406273 | - | 366 | WP_089110315.1 | phage tail tube protein | - |
| VCASEI_RS01950 () | 406283..407416 | - | 1134 | WP_089110314.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| VCASEI_RS01955 () | 407413..407619 | - | 207 | WP_089110313.1 | DUF2635 domain-containing protein | - |
| VCASEI_RS01960 () | 407656..408177 | - | 522 | WP_089110312.1 | phage virion morphogenesis protein | - |
| VCASEI_RS01965 () | 408174..408641 | - | 468 | WP_089110311.1 | phage tail protein | - |
| VCASEI_RS01970 () | 408650..409099 | - | 450 | WP_089110336.1 | head completion/stabilization protein | - |
| VCASEI_RS01975 () | 409241..410329 | - | 1089 | WP_089110310.1 | phage major capsid protein, P2 family | - |
| VCASEI_RS01980 () | 410387..411232 | - | 846 | WP_089110309.1 | GPO family capsid scaffolding protein | - |
| VCASEI_RS01985 () | 411366..413126 | + | 1761 | WP_089110308.1 | terminase family protein | - |
| VCASEI_RS01990 () | 413183..414115 | + | 933 | WP_089110335.1 | phage portal protein | - |
| VCASEI_RS01995 () | 414189..414677 | - | 489 | WP_089110307.1 | hypothetical protein | - |
| VCASEI_RS02005 () | 415327..415701 | - | 375 | WP_162621005.1 | hypothetical protein | - |
| VCASEI_RS02010 () | 415703..416242 | - | 540 | WP_089110305.1 | lysozyme | - |
| VCASEI_RS02015 () | 416239..416502 | - | 264 | WP_089110333.1 | hypothetical protein | - |
| VCASEI_RS02020 () | 416719..417597 | - | 879 | WP_089110304.1 | hypothetical protein | - |
| VCASEI_RS02025 () | 417597..418685 | - | 1089 | WP_089110303.1 | phage tail protein | - |
| VCASEI_RS02030 () | 418682..419146 | - | 465 | WP_089110302.1 | hypothetical protein | - |
| VCASEI_RS02035 () | 419128..420180 | - | 1053 | WP_089110301.1 | baseplate J/gp47 family protein | - |
| VCASEI_RS02040 () | 420177..420563 | - | 387 | WP_089110300.1 | phage GP46 family protein | - |
| VCASEI_RS02045 () | 420560..420757 | - | 198 | WP_089110299.1 | hypothetical protein | - |
| VCASEI_RS02050 () | 420777..421238 | - | 462 | WP_089110332.1 | phage baseplate assembly protein | - |
| VCASEI_RS02055 () | 421246..422181 | - | 936 | WP_089110298.1 | phage tail protein | - |
| VCASEI_RS02060 () | 422178..423374 | - | 1197 | WP_089110297.1 | DNA circularization N-terminal domain-containing protein | - |
| VCASEI_RS02065 () | 424112..425119 | - | 1008 | WP_162621006.1 | glycosyltransferase family 9 protein | - |
| VCASEI_RS02070 () | 425401..425685 | - | 285 | WP_089110295.1 | hypothetical protein | - |
| VCASEI_RS02075 () | 425682..425924 | - | 243 | WP_089110294.1 | ogr/Delta-like zinc finger family protein | - |
| VCASEI_RS02080 () | 425962..426213 | - | 252 | WP_089110293.1 | hypothetical protein | - |
| VCASEI_RS02085 () | 426221..428107 | - | 1887 | WP_089110292.1 | replication endonuclease | - |
| VCASEI_RS02090 () | 428043..428333 | - | 291 | WP_089110291.1 | hypothetical protein | - |
| VCASEI_RS02100 () | 428557..428778 | - | 222 | WP_089110289.1 | hypothetical protein | - |
| VCASEI_RS02105 () | 428775..429011 | - | 237 | WP_089110288.1 | hypothetical protein | - |
| VCASEI_RS02110 () | 429011..429220 | - | 210 | WP_089110287.1 | hypothetical protein | - |
| VCASEI_RS02115 () | 429314..429568 | - | 255 | WP_089110286.1 | pyocin activator PrtN family protein | - |
| VCASEI_RS02120 () | 429715..430404 | + | 690 | WP_089110285.1 | transcriptional regulator | - |
| VCASEI_RS02125 () | 430604..431827 | - | 1224 | WP_089110284.1 | RelA/SpoT domain-containing protein | Toxin Detail |
| VCASEI_RS02130 () | 431818..432285 | - | 468 | WP_089110283.1 | DUF4065 domain-containing protein | Antitoxin Detail |
| VCASEI_RS02135 () | 432400..433476 | - | 1077 | WP_089110282.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| VCASEI_RS02140 () | 433599..434609 | + | 1011 | WP_089110281.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| VCASEI_RS02145 () | 434817..435029 | + | 213 | WP_086962902.1 | envelope stress response protein PspG | - |
| VCASEI_RS02150 () | 435070..435387 | + | 318 | WP_086962900.1 | hypothetical protein | - |
| VCASEI_RS02155 () | 435525..435755 | + | 231 | WP_086962899.1 | hypothetical protein | - |
| VCASEI_RS02160 () | 435988..437802 | + | 1815 | WP_089110280.1 | assimilatory sulfite reductase (NADPH) flavoprotein subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|